Fadi017910.1
Basic Information
- Insect
- Fabriciana adippe
- Gene Symbol
- -
- Assembly
- GCA_905404265.1
- Location
- FR989989.1:13926164-13928382[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 7.3e-08 2.8e-05 24.3 0.0 2 39 17 55 16 60 0.91 2 2 0.4 1.5e+02 2.7 0.1 23 40 513 530 513 532 0.89
Sequence Information
- Coding Sequence
- ATGCCACGTAAATACTCGCGAATCTCTTCGAGGGCCACTTCCTATACAAAAGAATCGCTACAATTAGCAATGCAGAGAATAAATAATAAGGAGCTCACCTATGCAGCTGCTTCAAAACTGTACGGTATACCCACATCCACACTTAGTGATAGAATCCTGAAGAAAACAGGAATAGTAAGTGATACCCTTGGTAGGCCGACATCTATCCCAGTGGCATTAGAAGCAAAACTGGCAAACTGCCTACGAACACTGGAAAAGTGGGGGTGGGGCTTATCGAGAGAAGAGGTCCTTGATTATTTTACTATTCTCGAAAAGACGCTCCACGAGTTAGAGCTTTCGGATCCCAAGCGAATCTGGAACCTCGATGAAACTTCAGTTTGTCTTGATCCCACAAAAACTAAAGTTGTAGGTGCCAGAGGGGAGCCTTGTACACGAACAACGTGTGGAACTGCTAAAGAGAACATTACAGTATTGACTACTGTAAATGCAGCCGGACAAAAATTGGACCCCCTGATCGTATTTAAAGGCAGACACATGTACAAACAGTGGATGTTAGAGAGTCCTGAAAAATACGATTTCAATCTTGCATATGCAGCCAGCAAACGAGCAGTAGAGAACAACATCACCATATTAAAGCTTCCTGCACACACATCACATCTATTGCAACCGTTAGACTTGGCTGTATTCAAGTCTTTTAAAGCGATTTGGGATAAAAGCCTCGTAAAATGGCAACGACAAAACGTTGGAACCAAATTAAGAAAACAAAATTTCGCTAAAATGTTTGCTGAAGCGTGGCAAGAAACCAAACCACAAGTAATCCGAAATGGCTTTAAAAAAGGTGGCATTTACCCTTTTAATCCTGCGATTATACCAAAGCAAAAATATGATCCAGCAGCGTATGCGCGATGGCAAAAACACATAGCTCCAGTGAATTTTAAACAACCGAAATCTCTAATACAGATATGTGTAGATGAAATATATAAGATGATATCTCTTAACGGCTCTACTTCTACCCCAAATAATAACATTGCCTACTCTGAAACTTTGGACTCACCGACTTTAGAACATAGAGATAGATTACTACAACCACTCGCTACTTTCGAACAATTACTTCTAGAAAAATTTTCGCAACATTCTCAGAACTCCAAGAATAATGTACCTGTTAAGCTAAAACGAATCGCGAAAGGTGCAGAAAAGACTATAAAACGGAAACAAAAAACAGTACTTGAATCTAAAAATGACCATAATAAAGTGAGTATTTTATCGTCTGCAAAAATCACACCAGATAACCAAGCTTTGTACAAAATTTTACCTGGAAGTTTACAACTAAAGTCAATTGATAAAGATTTTGATTTGTGTACAAACCAAAAGCGAAAATTGTCACAAAATACAAGCGTACCTAATAAACCAAAGAAAAAAACAAAAAAAGTTAATTATCCTATAAAAACAACAACAAAATATCAAAAGGATTTCAGTGGAAACTGTATTATCAACATTGATAAAGATGACGTTGCTACCAAAAATGATATTGATGACTCGAACAAATACAATATAGGGGATACAGTTCTTGTTAGATATTTTAAAAGAAGTTGGACTTTTTACGTCGGTATCATTGAAGGTGGTAATATCAATTCGAACCCAAATATGTACAACATAACATTCTATAAAACTATTGGCAAGAAAAACGACCTGAAATTTGTTATTCCTAAGCGTAAAGACCAAGACTACGTACCTGATTCTAATATAGTTAAGGTGATAGAACTACTAAAGATAAATGAGGATCCTGTGGAGTATACCCTTATGAATGACGATGATGAGGATTTCTTTTAA
- Protein Sequence
- MPRKYSRISSRATSYTKESLQLAMQRINNKELTYAAASKLYGIPTSTLSDRILKKTGIVSDTLGRPTSIPVALEAKLANCLRTLEKWGWGLSREEVLDYFTILEKTLHELELSDPKRIWNLDETSVCLDPTKTKVVGARGEPCTRTTCGTAKENITVLTTVNAAGQKLDPLIVFKGRHMYKQWMLESPEKYDFNLAYAASKRAVENNITILKLPAHTSHLLQPLDLAVFKSFKAIWDKSLVKWQRQNVGTKLRKQNFAKMFAEAWQETKPQVIRNGFKKGGIYPFNPAIIPKQKYDPAAYARWQKHIAPVNFKQPKSLIQICVDEIYKMISLNGSTSTPNNNIAYSETLDSPTLEHRDRLLQPLATFEQLLLEKFSQHSQNSKNNVPVKLKRIAKGAEKTIKRKQKTVLESKNDHNKVSILSSAKITPDNQALYKILPGSLQLKSIDKDFDLCTNQKRKLSQNTSVPNKPKKKTKKVNYPIKTTTKYQKDFSGNCIINIDKDDVATKNDIDDSNKYNIGDTVLVRYFKRSWTFYVGIIEGGNINSNPNMYNITFYKTIGKKNDLKFVIPKRKDQDYVPDSNIVKVIELLKINEDPVEYTLMNDDDEDFF
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -