Fadi012397.1
Basic Information
- Insect
- Fabriciana adippe
- Gene Symbol
- -
- Assembly
- GCA_905404265.1
- Location
- FR989983.1:24331991-24338603[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 5 1.4e-07 5.5e-05 23.3 0.0 1 35 155 189 155 194 0.94 2 5 4.2e-05 0.016 15.4 0.0 1 33 221 253 221 255 0.92 3 5 4.4e-06 0.0017 18.6 0.0 9 42 317 350 310 352 0.89 4 5 1.4e-09 5.5e-07 29.7 0.0 5 40 401 437 397 441 0.84 5 5 1.9e-09 7.2e-07 29.4 0.0 1 37 457 493 457 496 0.93
Sequence Information
- Coding Sequence
- ATGGGAAAAAACAAAATCATTGATAATTTAAAAAGATGCAAATGCTGTTTAGGAGAAGACGGATTAAAAGATTTGTGGACCGAATATTATAACCAGGGTGAACGTGAGTTATATGGTGAAATGTTGAGTGAATGTTTTTCTTTAAATTGGGAACAACCATCAATAAACTCTGATTCTGATTCAGAACATATTTGTAAAGTATGTATATCTAAATTGCATGACGCTGTAAACTTTAAAAAGGAAATTTTATTGTCTGCACAATTGTTACTGGAAGAAGTTAAAAATGAATCGTATGAAGTGAAGATGGAGGATGATTCTGATGCTGACATCGAAACAGAGTATTTAAACATAGAGTTTTTAGAGGATGATGATATTGGTAAAGAAAAATCAGATATTAAAATGGAATCTCCAAGGAAACCAATCCAAGAAGAATTATTTATGAACCGAAAATCAAAAAAATATACAGAAGAGGATTTCAAAAAATGCCTCGAGGCTGTTAAAAGTAAAACTCTATCACAATACAAGGCATCCTTATTGTATAACATACCGAGAAGGACTATTCGAAGTGCCCTTGATAGTATGGAAATGGATACAGAATTACTAAACAAATCTGAAGAAATTGATATAGAACTATACATGAATCCAAAACCCAAATACTATAAAGAAGATGATTTAAAAAAATGTGTGAAGGCTGTTCAAAGTAAAAGGCTGTCACAAAACAGAGCACCCAAATTGTTTAAAATATCAAGGAGGGCTATTCAAAACCCTCCAGAGAACACGTCGCCTTTAGATAAATGTATGAAATTTACGGAAAAAGAAAGTATACAAAAGAATGAGGAAATTATAGACAGTTATGATAATACAATGGACTCACCGGAAAGAGACGAACCATTCAATGTTCCAAGGAAAAAAACAAAGGGATACATGGAAGCGGACGTACAGAAGTGTGTGGAGGAGGTGCAGAGTGAGGCCATGTCGCAGAGCAAGGTGGCCATCTTGCACAATGTGCCGCGGAAGGCGATACATAATACGTTAAAGGAAACGCCGCCTTTAGATGAAACTATAAGATTTAAGGAAAAAGAAAGTGTACAAAAGGATGAGGAAATTACAGATAGTGATGATAATACAATGGAGTCACCGGAAGGAGATGAACCATACAATGGTTCAGGGAAAAAAACAAAGAGATACACAGAGGCAGACGTGCAGAAGTGTGTGGAGGCGGTGCAGAGCAAGAGACTGTCGCAGTGCAAGGCGGCCATCTTGTACAATGTGCCGCGGTCGGCGATACATAACGCGCTAGTGAGACTTAAATTGGCCTCATCAAGCGACCCAATGGAGATGATAACGGCCCAAAAGTCCAAACATTACACGGAAGAGGACTTCAAGAAGTGTTTGGAGGCGGTCAAGAATAAGACCATGTCGCGACGTCAGGCCTGCACCTTGTATAACATACCGAGCAGTTCCCTCCATGCCGCTATAGAGAAATATTTTGATGATGCTGACAGAAAAACAGATGTGCAAAAGGCTCAAGATAATATGGACCTTGTAATAAAATATACGAATGCAACTCCATTGAAAGGGTTTCATCGAGCGGGATACGCGTGTGTCTTTTGCTCTATGAGATATGAGAAGCCCGCGGATTTGAAGAAACACACTTTAAAAACACACGGCAAACTGCGAGCTAAAGTTAGCGCGGATAGAATAGTTAAACTTGACGTGACAGGCCTAAAGTGTAAAATATGTGACGAAAAAATCGAAGCACTTGAAAGTGTTTTGGAACACTTGAGCTCGGTTCACGGGAAGAAAATTTTCACCGGCATCCGCGATTTTTTTATTCCGTTCAAATTTGAAAGTAAAGTGTTGGAGTGTGCGGTTTGTTCGGAAACGTTTCACAGTTTCAAGCCTTTAAACGATCATATGAATTGGAATCATTATAAAAATTTTGAGTGCGATGAGTGTGGACGCGGTTTTATAAGTAAACATTCTCTACGAGCGCACAGTCTTCGACATGAGACGGGAGTGTTCAAGTGTAGATTTTGCCCAAAAGAGTTTTCAAGTAAAGTGCGAAGTAATGCCCACGAACGTACAGTACACGTATACAATAACTATCTATACACATGCGGATATTGCCCGGAACGATTTGCCAATTTACCAAAGAAAAAACAGCACGAAGTGACAAAACATAACGCACCACAAACTGTATATAACTGTCAGGCGTGCAGCAAATCGTATCTGGATCTGCGTTCGCTAAGAAATCATATACGAGCGTTTCACTTAATGCAGCGTCCGCACAAATGTGCAAAGTGTGACTTCAGTGCGTACACGCCTTATGATTTGAAAAAGCATATGATAAAACATACGGGTGATAGAAATTTTACATGTGACATCTGTTCGAAGTCGTACGGAGTGAGGTCGACACTTCGAGAGCATATGCGGATACATGCGAACGATAGGCGGTTCAAGTGTGAGCACTGTGGGCAGGCGTTCGTGCAGAAGTGTAGTTGGAAAATGCATATGCGGACAAAGCATGGCGAACATGTGTAG
- Protein Sequence
- MGKNKIIDNLKRCKCCLGEDGLKDLWTEYYNQGERELYGEMLSECFSLNWEQPSINSDSDSEHICKVCISKLHDAVNFKKEILLSAQLLLEEVKNESYEVKMEDDSDADIETEYLNIEFLEDDDIGKEKSDIKMESPRKPIQEELFMNRKSKKYTEEDFKKCLEAVKSKTLSQYKASLLYNIPRRTIRSALDSMEMDTELLNKSEEIDIELYMNPKPKYYKEDDLKKCVKAVQSKRLSQNRAPKLFKISRRAIQNPPENTSPLDKCMKFTEKESIQKNEEIIDSYDNTMDSPERDEPFNVPRKKTKGYMEADVQKCVEEVQSEAMSQSKVAILHNVPRKAIHNTLKETPPLDETIRFKEKESVQKDEEITDSDDNTMESPEGDEPYNGSGKKTKRYTEADVQKCVEAVQSKRLSQCKAAILYNVPRSAIHNALVRLKLASSSDPMEMITAQKSKHYTEEDFKKCLEAVKNKTMSRRQACTLYNIPSSSLHAAIEKYFDDADRKTDVQKAQDNMDLVIKYTNATPLKGFHRAGYACVFCSMRYEKPADLKKHTLKTHGKLRAKVSADRIVKLDVTGLKCKICDEKIEALESVLEHLSSVHGKKIFTGIRDFFIPFKFESKVLECAVCSETFHSFKPLNDHMNWNHYKNFECDECGRGFISKHSLRAHSLRHETGVFKCRFCPKEFSSKVRSNAHERTVHVYNNYLYTCGYCPERFANLPKKKQHEVTKHNAPQTVYNCQACSKSYLDLRSLRNHIRAFHLMQRPHKCAKCDFSAYTPYDLKKHMIKHTGDRNFTCDICSKSYGVRSTLREHMRIHANDRRFKCEHCGQAFVQKCSWKMHMRTKHGEHV
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00723447;
- 90% Identity
- iTF_00723447;
- 80% Identity
- iTF_00723447;