Basic Information

Insect: Exocentrus adspersus
Gene Symbol: -
Assembly: GCA_029955175.1
Location: JANEYG010000089.1:365436-367500[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 2.1e-05 0.0014 19.6 0.8 1 23 321 343 321 343 0.98

2 9 0.0081 0.55 11.5 2.5 1 23 352 375 352 375 0.96

3 9 1.8e-05 0.0012 19.8 2.1 1 23 384 407 384 407 0.97

4 9 0.00018 0.012 16.7 2.2 1 23 416 438 416 438 0.99

5 9 0.055 3.8 8.9 3.9 1 23 447 469 447 469 0.97

6 9 0.56 38 5.7 3.4 1 23 478 501 478 501 0.97

7 9 0.0035 0.24 12.7 5.0 2 23 511 532 510 532 0.97

8 9 0.0041 0.28 12.4 1.4 1 23 541 563 541 563 0.98

9 9 0.0017 0.12 13.6 1.5 1 23 572 595 572 595 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	2.1e-05	0.0014	19.6	0.8	1	23	321	343	321	343	0.98
2	9	0.0081	0.55	11.5	2.5	1	23	352	375	352	375	0.96
3	9	1.8e-05	0.0012	19.8	2.1	1	23	384	407	384	407	0.97
4	9	0.00018	0.012	16.7	2.2	1	23	416	438	416	438	0.99
5	9	0.055	3.8	8.9	3.9	1	23	447	469	447	469	0.97
6	9	0.56	38	5.7	3.4	1	23	478	501	478	501	0.97
7	9	0.0035	0.24	12.7	5.0	2	23	511	532	510	532	0.97
8	9	0.0041	0.28	12.4	1.4	1	23	541	563	541	563	0.98
9	9	0.0017	0.12	13.6	1.5	1	23	572	595	572	595	0.95

Sequence Information

Coding Sequence: ATGAACGGATCCATGACGAGGTTGTGTGAATTATGTTCTAATGCATTTTCGGAGTGCAATTTCGAGGAAATCGTTGAAGCCACAAGGGAACTTTTGAATGTACTGTTAATTCAAGTTAGTATTGATAAAAATCGGCGTGCCCTCATGTGCCAGTACTGTTCCGACAAAGTAAAGCTTTTGTACGAGTTTAAATCCGGCTGTCTCTACACCGAAGACTTTGTCAGTGCGTTTATTGATGCGAACAAGACCCAAGTCGATTTAAAGGAACTGTTTGTAAATGAAAAGGAACATGGCAAGCCCACCAACATATTACTCGACCAAAATCTATGCAGACTCTGTATGGAAGTTGTTGTTTCCGGAGCCGGAATCGTATCCTTGGATAAAAACGAGTCGTACGTAGTTTTCATAAAAGGTCTGATTAAAAAGTGCGTTCCTGAAGTGAATATGCACAGTACTAAAAACGCCGTGGTTTGCGATACTTGTGTGCACTCGTTGGAAGATTACTCCATTTTCCTGGACAGCTGTGCGGATGTCGCAGACAAGAAAACCAAGTTCCATGGTCCGCAAAGTGAAACCGGTCAATCAGCAATTGAAAAGTTTAGCGGATTTTATGATGCCACGCCTGACAAAAGCGATAAGGAAACTTTTACAGGACAAGAAAATTATGGAATTAAAATTGAACGAATCGAAGACGAAGCGTTTGACTGCTTTCAGTTAGGTGACCACCAAGACGTTTCAACCGACACTGAACAGTCCAAATATGCACCCTATAATTGTGAGAATAGTGAGTCTGCGGTTGATAATCCGTTACCAGTAATTAAATCTCAAGCGAAGGAACATGAAAGTGGTTTAAAGGTGAAATCTGAACTGGATTGCGGTACAACTACTCTTGAAAATCGTTCAGAAACGGAACCTTACAAGAAAATTCAAAGCAAGGACAAGTCTCGGAGGAAAAAGTGCTTTAAATGTGACCTGTGCGGTTACACATCCAACCAGAGGGGTAATTTAAACAAGCATACGTTGATTCATAAACATCCCTGGGAGATAGAATGGTTTAAATGCGATTCGTGCGGTTTCAAGGcgaaacaaaaattacatttgagGAGGCATGTAGAGAGAATCCACAAACATTCATCGGAAGTGGAGTGGTTCCAGTGCGATTTGTGTAACGCCAAGTTCAAGCAAAAACCACACTTGAAAAGGCATGTCATGTCCATTCATAACTATTCAGCGGAAGCAAGTCGGTTTAAATGTGGTTCGTGCGATTTCAGTTCGAAATACAACAGTAGTCTACAAACTCATATGTCGACTCATAAACCTCGCTCGGAGATCGAATGGTTCCACTGCGACTCGTGTGACTATAAAGCCGATACGTGCAGCAAATTAAAGGTTCATATGTCGATCCACAGAGACCCTTTGGAGGTGGAATGGTTCAGCTGTCATTTGTGCACCTTCAAGTCGTATCAGAAAGCTTACGTGAGCACGCATGTCCGGAGAGTGCACCTGAAAAACACCCCTCGTGTATCGGTGGAATGCCATTTGTGTGATTTTAAGACGCACCGGAAGGACCATCTGACGGTTCATATGTTGGTTCATAAAGATCCGTCGAAAGTGAATTGGTTTAGTTGCGATACGTGCGACTACAAGTCGAAATATAAGCAGGTGTTGAACACTCACATGCTGATCCATAAAAGCGGTTCGGAGATTAAATGGTTCGAATGTTACTCGTGTGATTATAAGGCGAAGCGAAAGCAGAGCTTGAACAGGCACATGTTGCTGATGCATAAAGAGGTTACCGGAGAGGGAGAAAGCGAGGATGGTTGCAACAAgccataa
Protein Sequence: MNGSMTRLCELCSNAFSECNFEEIVEATRELLNVLLIQVSIDKNRRALMCQYCSDKVKLLYEFKSGCLYTEDFVSAFIDANKTQVDLKELFVNEKEHGKPTNILLDQNLCRLCMEVVVSGAGIVSLDKNESYVVFIKGLIKKCVPEVNMHSTKNAVVCDTCVHSLEDYSIFLDSCADVADKKTKFHGPQSETGQSAIEKFSGFYDATPDKSDKETFTGQENYGIKIERIEDEAFDCFQLGDHQDVSTDTEQSKYAPYNCENSESAVDNPLPVIKSQAKEHESGLKVKSELDCGTTTLENRSETEPYKKIQSKDKSRRKKCFKCDLCGYTSNQRGNLNKHTLIHKHPWEIEWFKCDSCGFKAKQKLHLRRHVERIHKHSSEVEWFQCDLCNAKFKQKPHLKRHVMSIHNYSAEASRFKCGSCDFSSKYNSSLQTHMSTHKPRSEIEWFHCDSCDYKADTCSKLKVHMSIHRDPLEVEWFSCHLCTFKSYQKAYVSTHVRRVHLKNTPRVSVECHLCDFKTHRKDHLTVHMLVHKDPSKVNWFSCDTCDYKSKYKQVLNTHMLIHKSGSEIKWFECYSCDYKAKRKQSLNRHMLLMHKEVTGEGESEDGCNKP

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -