Eads025441.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Exocentrus adspersus
Gene Symbol
-
Assembly
GCA_029955175.1
Location
JANEYG010000355.1:57529-63244[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 13 0.0021 0.14 13.4 0.2 2 23 471 493 471 493 0.92
2 13 0.012 0.79 11.0 0.6 1 23 518 541 518 541 0.95
3 13 0.0021 0.14 13.3 2.6 1 21 547 567 547 568 0.94
4 13 1.7 1.1e+02 4.2 0.9 2 23 579 599 578 599 0.95
5 13 0.11 7.6 7.9 3.8 2 23 603 624 602 624 0.94
6 13 1.9e-05 0.0013 19.8 0.1 3 23 642 662 641 662 0.99
7 13 3.2e-05 0.0022 19.1 3.2 1 23 668 691 668 691 0.97
8 13 0.023 1.6 10.1 1.9 1 23 698 721 698 721 0.94
9 13 0.00056 0.038 15.2 1.6 3 23 729 749 727 749 0.96
10 13 0.0048 0.33 12.2 1.8 2 23 780 802 779 802 0.95
11 13 1.7e-05 0.0011 20.0 3.8 1 23 811 833 811 833 0.99
12 13 0.01 0.68 11.2 3.6 2 23 842 863 841 863 0.94
13 13 0.0025 0.17 13.1 0.1 3 23 871 892 870 892 0.96

Sequence Information

Coding Sequence
ATGCCCACCAAATGTTTAGTCTGGTTTTGCCAGAGTAAATCTGGTGAGAAAGATGTATCcttttttaatttaaCGAAGGAAAGATCTATTTCATGGCTAAAAGCTTTAGGCCGAGATCCAACAGATCCTTTATCTCCGTATAACAAGATTTGTTCCAAACACTTCAAAGCAGAAGATATTATTTTAACAGGAGGCAAAATTCAACTAAAGAAAAATGCTGTTCCAACACTTTTCCTAAAATTAAGTGATGAAAAAGTCGGAAGgttCCCACGTAATCCTCAGAAGCGGAAACTGTGGCTGAATTTCGTTGATCAAAAACCCATCCATCCCAATGCAGTGCTGTGCTCGCAACATTTCAAAGAAACGGACTTTGAGAAACATACCTCCAAAGTGTTCTTGACATCGGATGCAGTACCATCAACGAAAATACAGAGGCATAAATATGACAGAGCAAGTTTTCCTTTTAAAACCGCAGTATCTACTTCAAGTACTTGTCCACTGGATGCAGAGTCTGCTTGTACTACCTCGCAGTCTATTCCATTTGCTTCAACTGTGGGGGACATGGTTATACAAATACCTTCTCTGAAAACAGCTACTACAGACGCCATCGTTGTATCTActactaaaaataatactCCTGCAAAGAGTAAACTTTGCTCCAGTTGGCTCTCGAAGATAAAATGCAGAACTTGTTTGAAAGAATTCAAAAGGAATTGCGTATTCGGCTTGCAAACGAAATTATCCATCGGAATGACCGTTCAACAGATGTTGCTGCTTTTTGTCCCGGAAATGGTACAACCGACCCAACCTGGATTGATCGATTTTGTATGCAATGACTGTATGAAGGCGATACGGGCATTTGTTGCATTCTTGGAAAGATTCAATGCGGTAGAAGAAGAATTAAAATCAAAGGAATCAGACATTAGGGAACAAACTGCACACTTTTCCAAAGAAAACGATACAAGCCGACAGGAAGAAACTGGTCCGGGTCAAACACCAGATGAAGAAATCGACAATACAGAGAAGGAATTATCGGCACCTATAAAAGTTGAAGATTTCAACGAAACACTAGAAAGCCAATATTTACCAAGCGGCATTTTGCAACCAATCCAGAATTCTAAGGAACTATATTCCTCGGAAACTGGAGATGTCATCTATAATTTTGCAGAGGGTAACAACATGATTCTATCTGTCATAAAACAGGAGGATTTGGGAGTCGCAGACATGGACGCCGCTGCAGTGgagaatataaataattcagaCTCGATAATATCGACGTTAAACCCCACTCTAATTTCTAGTAACAAGGTTACAAGGTACGACCGTGTTttttctaatCTGAAAGATAACCCACCGTGGCAGTCGCCTCCTGAAAATAGAAGAATACTCTTACTTGGCAATGCGATAAATCGCTGTCCCGAATGTAAAATTACGTTCCCTTCGGAAGACGATCTCAAGTACCATTTCCTACAAGTTCATCCCAGCCAAGCGTACCCACAATGTGACGACAAACTTGAAATTGTTAAGGCAGATAAGTGGAGCAGAAGAGAATATAATTGCCCTGTGTGTAACGCGTTGTTCTATAAGAGTCTCCTTTTAAATAAGCATATGACACAGAACCATAAGGACTACTTTTGGTATTCGTGCGACAAGTGCGGTCGCAAATTCAAAAAGAAGTTCACCTACAAGTTGCATGTTCAAAATTACGAACGCTTCAAAAATTGCAACATGCAGACGTGCCGTATTTGCAAGGAAGTaatatttaaAGACGAGATGAAGAAACATTATGAAACTCACAAGGATTTACAGTGTGTTCTATGCAATAGGAGATTTTTGTCGCAACATCATTACAAAAGACACCTTGCAGCTCacgacaataaaattaaaaaacctgGCCATAAAGCTTATGTTAGACAATCGCTGTGTCCAATTTGTGGCAAATTATTTGGAAACGTTTCAAACTTGGAAACCCATATGACCACTCATTCACAAGACCGCAACTATATGTGCGACCAGTGTCCAAAAACTTTCAAAACAAGAAATACCCTTAGAATTCACCACAATAGAATACACGTCCTCAAGAGTAATAACTACATGTGTGCCACGTGTGGGACCACATTTAAAAGTCTGAACGGTTTGAGATGCCACATAAATTTAAAACATTCAGACGTTAACAAGCATCTCTGCCAAGTATGCGGTGCTGCTTTCAAACGAGGCGACTATTACAGAAATCACATGAAGAAACATACAAACGCAGCTCCTAGTTCGAGAAGAAGATGTGGAGGAGTCCCCAGAAAGTACCGAATTAGATCAGATCGGAGATGTGAAGAGCCTCTAACTTGTAAATACTGCTCGAAGAAATTCATGTACATCTTCACTCTGAGAGCGCATCTCTTGAAGAGCCATATAAGCAGCAAAGGTAGCACCGAATACAAGTGCCAATACTGTGATCTGACATTCTCCAGTAAGGACAACAAGAGGAGGCACGAGAAAACGCACGCCGATCCCGAATTGTTTGCATTAACttgtgTGGTGTGTCACTGCCGCTTCAGTACTAAGGAGGAGTTGGAAACCCATTCGGCTAAACACGCAGGTTCTACGAGGCGTATCTGCGATTTGTGCGGGGAGGCGTTCCCGAGCAAGTACCTCATGGTGAATCACAAGCGCTACGCACATTTCAACCCAAAACTTATCGAGGAGCagcaaaataaattgttgGAGGATGGTTTGAAGGAATACATGCTGCCCTCAGACGAACACACAGACGTGTAA
Protein Sequence
MPTKCLVWFCQSKSGEKDVSFFNLTKERSISWLKALGRDPTDPLSPYNKICSKHFKAEDIILTGGKIQLKKNAVPTLFLKLSDEKVGRFPRNPQKRKLWLNFVDQKPIHPNAVLCSQHFKETDFEKHTSKVFLTSDAVPSTKIQRHKYDRASFPFKTAVSTSSTCPLDAESACTTSQSIPFASTVGDMVIQIPSLKTATTDAIVVSTTKNNTPAKSKLCSSWLSKIKCRTCLKEFKRNCVFGLQTKLSIGMTVQQMLLLFVPEMVQPTQPGLIDFVCNDCMKAIRAFVAFLERFNAVEEELKSKESDIREQTAHFSKENDTSRQEETGPGQTPDEEIDNTEKELSAPIKVEDFNETLESQYLPSGILQPIQNSKELYSSETGDVIYNFAEGNNMILSVIKQEDLGVADMDAAAVENINNSDSIISTLNPTLISSNKVTRYDRVFSNLKDNPPWQSPPENRRILLLGNAINRCPECKITFPSEDDLKYHFLQVHPSQAYPQCDDKLEIVKADKWSRREYNCPVCNALFYKSLLLNKHMTQNHKDYFWYSCDKCGRKFKKKFTYKLHVQNYERFKNCNMQTCRICKEVIFKDEMKKHYETHKDLQCVLCNRRFLSQHHYKRHLAAHDNKIKKPGHKAYVRQSLCPICGKLFGNVSNLETHMTTHSQDRNYMCDQCPKTFKTRNTLRIHHNRIHVLKSNNYMCATCGTTFKSLNGLRCHINLKHSDVNKHLCQVCGAAFKRGDYYRNHMKKHTNAAPSSRRRCGGVPRKYRIRSDRRCEEPLTCKYCSKKFMYIFTLRAHLLKSHISSKGSTEYKCQYCDLTFSSKDNKRRHEKTHADPELFALTCVVCHCRFSTKEELETHSAKHAGSTRRICDLCGEAFPSKYLMVNHKRYAHFNPKLIEEQQNKLLEDGLKEYMLPSDEHTDV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00722090;
90% Identity
iTF_00722090;
80% Identity
iTF_00722090;