Basic Information

Insect: Exocentrus adspersus
Gene Symbol: -
Assembly: GCA_029955175.1
Location: JANEYG010000355.1:77815-80359[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.0047 0.32 12.2 2.7 1 23 299 322 299 322 0.96

2 10 0.00089 0.06 14.5 0.7 1 23 351 373 351 373 0.96

3 10 1.1e-06 7.2e-05 23.7 0.4 3 23 382 402 381 402 0.99

4 10 0.0053 0.36 12.1 11.3 1 23 408 430 408 430 0.98

5 10 0.24 16 6.9 0.1 1 23 436 459 436 459 0.93

6 10 3.9e-05 0.0027 18.8 2.6 1 23 465 487 465 487 0.97

7 10 0.00017 0.012 16.8 0.6 2 23 520 542 519 542 0.95

8 10 0.0003 0.02 16.0 8.7 1 23 549 571 549 571 0.99

9 10 0.015 1 10.7 0.6 2 19 580 597 579 601 0.93

10 10 0.00093 0.063 14.5 1.0 2 23 607 629 607 629 0.96

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.0047	0.32	12.2	2.7	1	23	299	322	299	322	0.96
2	10	0.00089	0.06	14.5	0.7	1	23	351	373	351	373	0.96
3	10	1.1e-06	7.2e-05	23.7	0.4	3	23	382	402	381	402	0.99
4	10	0.0053	0.36	12.1	11.3	1	23	408	430	408	430	0.98
5	10	0.24	16	6.9	0.1	1	23	436	459	436	459	0.93
6	10	3.9e-05	0.0027	18.8	2.6	1	23	465	487	465	487	0.97
7	10	0.00017	0.012	16.8	0.6	2	23	520	542	519	542	0.95
8	10	0.0003	0.02	16.0	8.7	1	23	549	571	549	571	0.99
9	10	0.015	1	10.7	0.6	2	19	580	597	579	601	0.93
10	10	0.00093	0.063	14.5	1.0	2	23	607	629	607	629	0.96

Sequence Information

Coding Sequence: ATGAGATGCAGAACATGTTTCAAAACATTTAGAGGGGAATTCCTGACCTCCCTAAAGAAGAATTTGCCTATCGGCGTTACCATCCAGGAAATGCTGCTGCTGTTTATTCCAGAAATGGTACCGTCAGAGACGGTGAAAGATTACATATGCGGCGCCTGTATGAAGACGATACAGGCTTTTATAgactttatagaaaaattaattatagtgGAAAACCATATAAGACTGAAGGAAGCTATATTTACCGAGAAATGCTTCGCTAATATTGTCAAGACAAGGCCTATAGTTAATTCACTTGAAAATCAAAGTAATTCCAAAAGAAACTCGACACAAGAAGAAAATTCTGTAGATACCATTTCCAACGAATTAGAAATTGAAGAAGCAAATCATACAACTAGGCCCGATGAACTTGAAGATATCATTCTTGAAATAGATTCTGATCAATCAGATTCCTATAGTGCGATCACTGTTCTCAGCCGTCATAATGCAGAAGTAGAAAAATGTCCTTCCAAAAACAAAGACAGTGCACAACATGAGGATATGGATATTGTTGACTTAACCGACGAGTGTCTTGGAACAGAAATTTTAGCAACTCCTAAAGCTTCGTCCGATACTGTAATCATTCACgatcatacaaaaaaaaatctttcacTTTCAATAGACGATATAAACCATCCGGAGAGCTGCGTAACCTCAAGCCGCGCTTCcataacaacaataattcCAAGCATGATACCTTCGAACCCAGTTACGAATCATGATACAGTTGTAAGCATCCCTGCGGCTAGTAAGGATATTAATGGTTTCCTCGAGAGGATCTCACggttcaaaaataatttaccacGTCGTTGGTTTAGAGGAAACAGAAGAGTATTACTGTTTGGTAATGTAATACACCACTGTCCGCTGTGCAGGCTTATCTTCCCCAGTAAACCCGATTTGAAAACCCATTTTCGGCGAGTGCATCCCCGTCAGGAGTACACGGAACGTGATGAGGACTGCGATACGAACGTTGGCCAAGAAGTATTAAACGATAAACCAGAGGATGGTTTCCAGTGTGTTGTGTGTAGCAAAAAATATGTGTCGGAATATCAATACAACAAACACCTTATAGGCCATCAGAATGAAATAGATAGACGTCTTTGCCCGGTTTGTGGAAAAGTGTTTATGGATAAGTCGAATTTTCGACAGCACCTGGAGACTCATTCCCGGACGCGCAACTACATGTGCCACAGGTGTGCGAAAACCTTCAAATCCTTCAGTCACCTCAAACACCACTTCAAGACCCACACCGAGGATAGGAGATATCAGTGTACGGTGTGTGGGATGCTTATGAAAAGCTCTCAGGGTCTGGAAGGCCACCAACTGTTAAAACATTCCGATACGTGTACTCACGTGTGCCACGTATGTGGCGCTACGTTCAAACGTGCCGACTACTACCGGAAACACGTTGAGAGTCATACAGAACCAAATTCCGGTACAAATCCAACTATTCGTCGAACTAAAGGGcataaaaagtatatttttagatcAGATAAAATAAGTGaagtaCCTTTACCGTGTAAGTACTGCAACAAGAAATTCAGATACATCGACGAATTGAGGGGGCACTTGTTGAGGATGCACCTGACGGGTAGCGCAAAATACAAATGCCAGCATTGCCACATGAGTTTCTCTACCAAGGAGAGCCAAAACAGGCACCAGAAAAGACACGAGGATCCTGCAGCGTTCGAATTAACTTGTAAAGTTTGTTATAAGCGCTACGACACCAAAAAGGAACTGGAAATGCATTCGCCTATGCACAAACTGACGAGACGTAAATGCGATTTATGCCAAGAGATATTTCCCAGCAAGTACCTGTTGATGAACCACAAGAGATACAAGCACTTCAACCCCGAAGTCAATGAAAAAGACAAGGTTAATTTATTGGCGGATGGTTTGAGTGACTATACTTTGGGACTAGAGaaatag
Protein Sequence: MRCRTCFKTFRGEFLTSLKKNLPIGVTIQEMLLLFIPEMVPSETVKDYICGACMKTIQAFIDFIEKLIIVENHIRLKEAIFTEKCFANIVKTRPIVNSLENQSNSKRNSTQEENSVDTISNELEIEEANHTTRPDELEDIILEIDSDQSDSYSAITVLSRHNAEVEKCPSKNKDSAQHEDMDIVDLTDECLGTEILATPKASSDTVIIHDHTKKNLSLSIDDINHPESCVTSSRASITTIIPSMIPSNPVTNHDTVVSIPAASKDINGFLERISRFKNNLPRRWFRGNRRVLLFGNVIHHCPLCRLIFPSKPDLKTHFRRVHPRQEYTERDEDCDTNVGQEVLNDKPEDGFQCVVCSKKYVSEYQYNKHLIGHQNEIDRRLCPVCGKVFMDKSNFRQHLETHSRTRNYMCHRCAKTFKSFSHLKHHFKTHTEDRRYQCTVCGMLMKSSQGLEGHQLLKHSDTCTHVCHVCGATFKRADYYRKHVESHTEPNSGTNPTIRRTKGHKKYIFRSDKISEVPLPCKYCNKKFRYIDELRGHLLRMHLTGSAKYKCQHCHMSFSTKESQNRHQKRHEDPAAFELTCKVCYKRYDTKKELEMHSPMHKLTRRKCDLCQEIFPSKYLLMNHKRYKHFNPEVNEKDKVNLLADGLSDYTLGLEK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -