Basic Information

Insect: Exocentrus adspersus
Gene Symbol: -
Assembly: GCA_029955175.1
Location: JANEYG010000089.1:307213-308886[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 11 0.0041 0.28 12.4 0.2 2 23 121 142 120 142 0.95

2 11 0.0061 0.42 11.9 3.4 1 23 151 173 151 173 0.96

3 11 0.00031 0.021 16.0 2.9 1 23 180 202 180 202 0.99

4 11 5e-06 0.00034 21.6 2.3 1 23 211 233 211 233 0.98

5 11 0.0011 0.077 14.2 2.8 1 23 242 265 242 265 0.95

6 11 0.078 5.3 8.4 0.6 1 23 274 296 274 296 0.97

7 11 7.4e-05 0.005 17.9 0.4 1 23 303 325 303 325 0.97

8 11 0.0028 0.19 12.9 1.4 1 23 334 356 334 356 0.98

9 11 7.4e-06 0.00051 21.1 3.0 1 23 439 461 434 461 0.99

10 11 0.00081 0.055 14.7 1.4 1 23 470 492 470 492 0.97

11 11 0.0014 0.093 13.9 0.2 1 23 499 521 499 521 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	11	0.0041	0.28	12.4	0.2	2	23	121	142	120	142	0.95
2	11	0.0061	0.42	11.9	3.4	1	23	151	173	151	173	0.96
3	11	0.00031	0.021	16.0	2.9	1	23	180	202	180	202	0.99
4	11	5e-06	0.00034	21.6	2.3	1	23	211	233	211	233	0.98
5	11	0.0011	0.077	14.2	2.8	1	23	242	265	242	265	0.95
6	11	0.078	5.3	8.4	0.6	1	23	274	296	274	296	0.97
7	11	7.4e-05	0.005	17.9	0.4	1	23	303	325	303	325	0.97
8	11	0.0028	0.19	12.9	1.4	1	23	334	356	334	356	0.98
9	11	7.4e-06	0.00051	21.1	3.0	1	23	439	461	434	461	0.99
10	11	0.00081	0.055	14.7	1.4	1	23	470	492	470	492	0.97
11	11	0.0014	0.093	13.9	0.2	1	23	499	521	499	521	0.98

Sequence Information

Coding Sequence: ATGAAGAAAATCCATAGCACATTTGTCGAAACGAAGGATGCTTTTAAGGTTGAGGCTGAACTTGAAATTGCCAATAATTGTATTAAATCCGAGGATCTTGAACTAATCTGTAAcgatattaaaacaaatatgcTCGATGAAGAACTAATCCGTGATCCTATTAAGGTAGAAGAACAAGGAATTGTTTACGAAGATTTGATGGAGGACGTTTCCTTCTCTGAAACGGAAGGAGAAACGAAGTTTTTTGAATGCCATCAATTACAGGATCAACATGCAAGTGTAGGCGGAAGCAAACATTCCAAGGGTGATAATAATACTCTTGGGTTACATCAAGACGAGTTGTTGGATACAAAAACGCTCAAATGTAATTTATGTGATTACCAGGCGAAAAAAAGAGCCAATCTAATGAGACACGCCATAATCCATAAAGATCCCTCGCAGGTAAAATGGTTCGAATGTGATTCATGcaattttaaaacgaaaagAAGCGATCACTTGAGGTCCCATGTATTTGTTCATAAAGATCCTTTggaatggttcaaatgccacTTGTGCAACTACAAGGCAAAACTGAAACCCAATCTAAACCAACACATGCGGATCCATAAAGATAACTGGCAAACGCAGTGGTTCAAATGCGAGCTGTGTGACGTTAGGACGAAACAGAAAAGCCATTTGAACAGGCATATGATCGTTCATAAAGCTACgtcggaaattgaatggttccaGTGCAACTTGTGCGATTACAAAACAAAGCATAAATCCAGTTGGAAGACGCACGTTATGTTGATTCATGAAGATCCTTCGCAAGTACAGTGGTTCGAGTGTGACTTGTGCAGTTTCAAGGCGAAAAGGAGGTACGTCTTAAAGAATCATGCGCTTGTCCATAAAGACCCCTGCGAATGGTTCAAGTGTAATGTATGCGAGTATTCGACAACGGTGAAAGGCAATTTAACGAAACATGCGTTGGTCCATAAAGATCCCTCGGAAAGGAACTGGTTCAGGTGTACGTTGTGCGATTATAAGGCGGGAgagaaaaagtatttaaagaAGCATATGTCGGTGCATAATAACGACGTTAAGGTAGAGGAATTGGAAGTTATCCATGATTGTGTTAAAACCGAGACGCTTGAATCGATCTGCGACAGCATCAAGTGTGAATCGACAAACAATGAGTTTATGCCAGATTTAAATTCATGTCCGGTGGAGCAACGCGTGGACGACCCCAGTGAAGTAAAACCTGACGAAAGTAATTCGAGTACAAACTTTAAAACTCTTGCGACTCATCAAAACAGTAGCGTATGTAAAAAATCTTTCAAATGCGATTTGTGTGACTATAAAGCAAAACAGAAAAGCAATTTAAGGAGACATATGCTGATCCATAAACAACCATCGGCGGTggaatggttcaaatgtgatttatgcaattttaaaacgaaaagAAGGGATTACTTGAAAGCTCATGGATTGGTCCACAAACATCGGTCGGAAAGGTATAGATGTAGTGTGTGCGGTTACGATGCGAAGGAGAAGGACACTTTGAAGCAACACGTGCTGATTCATAAACACAAATCACACGCGCAGTGGTCCGAATGCGACATGTGTAATGTtaagacaaaataa
Protein Sequence: MKKIHSTFVETKDAFKVEAELEIANNCIKSEDLELICNDIKTNMLDEELIRDPIKVEEQGIVYEDLMEDVSFSETEGETKFFECHQLQDQHASVGGSKHSKGDNNTLGLHQDELLDTKTLKCNLCDYQAKKRANLMRHAIIHKDPSQVKWFECDSCNFKTKRSDHLRSHVFVHKDPLEWFKCHLCNYKAKLKPNLNQHMRIHKDNWQTQWFKCELCDVRTKQKSHLNRHMIVHKATSEIEWFQCNLCDYKTKHKSSWKTHVMLIHEDPSQVQWFECDLCSFKAKRRYVLKNHALVHKDPCEWFKCNVCEYSTTVKGNLTKHALVHKDPSERNWFRCTLCDYKAGEKKYLKKHMSVHNNDVKVEELEVIHDCVKTETLESICDSIKCESTNNEFMPDLNSCPVEQRVDDPSEVKPDESNSSTNFKTLATHQNSSVCKKSFKCDLCDYKAKQKSNLRRHMLIHKQPSAVEWFKCDLCNFKTKRRDYLKAHGLVHKHRSERYRCSVCGYDAKEKDTLKQHVLIHKHKSHAQWSECDMCNVKTK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -