Basic Information

Insect: Exocentrus adspersus
Gene Symbol: -
Assembly: GCA_029955175.1
Location: JANEYG010000203.1:120810-123581[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.001 0.07 14.3 2.5 1 23 266 288 266 288 0.98

2 14 0.00073 0.05 14.8 2.2 1 23 297 319 297 319 0.99

3 14 0.00031 0.021 16.0 3.4 1 23 328 350 328 350 0.98

4 14 0.00022 0.015 16.4 3.4 1 23 359 381 359 381 0.98

5 14 0.00018 0.012 16.7 0.7 1 23 390 412 390 412 0.99

6 14 0.0002 0.014 16.5 7.8 1 23 421 443 421 443 0.98

7 14 0.0023 0.16 13.2 4.5 1 23 452 474 452 474 0.97

8 14 0.0042 0.28 12.4 4.1 1 23 483 506 483 506 0.97

9 14 0.00013 0.0091 17.1 0.7 1 23 515 537 515 537 0.98

10 14 0.0025 0.17 13.1 3.4 1 23 546 568 546 568 0.99

11 14 0.012 0.81 11.0 2.4 2 23 578 599 577 599 0.97

12 14 0.0022 0.15 13.3 2.9 1 23 608 630 608 630 0.98

13 14 0.11 7.4 8.0 4.0 2 23 640 661 640 661 0.97

14 14 3.1e-05 0.0021 19.1 5.1 1 23 670 692 670 692 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.001	0.07	14.3	2.5	1	23	266	288	266	288	0.98
2	14	0.00073	0.05	14.8	2.2	1	23	297	319	297	319	0.99
3	14	0.00031	0.021	16.0	3.4	1	23	328	350	328	350	0.98
4	14	0.00022	0.015	16.4	3.4	1	23	359	381	359	381	0.98
5	14	0.00018	0.012	16.7	0.7	1	23	390	412	390	412	0.99
6	14	0.0002	0.014	16.5	7.8	1	23	421	443	421	443	0.98
7	14	0.0023	0.16	13.2	4.5	1	23	452	474	452	474	0.97
8	14	0.0042	0.28	12.4	4.1	1	23	483	506	483	506	0.97
9	14	0.00013	0.0091	17.1	0.7	1	23	515	537	515	537	0.98
10	14	0.0025	0.17	13.1	3.4	1	23	546	568	546	568	0.99
11	14	0.012	0.81	11.0	2.4	2	23	578	599	577	599	0.97
12	14	0.0022	0.15	13.3	2.9	1	23	608	630	608	630	0.98
13	14	0.11	7.4	8.0	4.0	2	23	640	661	640	661	0.97
14	14	3.1e-05	0.0021	19.1	5.1	1	23	670	692	670	692	0.98

Sequence Information

Coding Sequence: atgaacaaaaaaccaaaaatttgtagATTATGTTGTAATGTATCCTCAGAAGAGAACTTGGAAGAAATCGGTGAGCTTACGAAAGACGTTTTAGATGTTCTTCTAATCAACATGAATATGAACGTAAGCAAACGTCCTGTGATGTGTTCATGTTGTTCCGGTAAAGTGCACGGTTTATTTGCATTCAAATCGGGGTGCATGTATACGGAAGATTTTATCGCTCCTTTCGTGGATTCCGAAACACAAAATCAAGTCGATCTGAAGGAAGTATACATCAGGGAAAAAGGCCTTAAGGTTCTGGTCGAGATCTTACGTGACCGGAACTTGTGCAGGCTGTGCATGAAAGCTGTGGAAGATAAATTCGTGTCTTTGGACGGATTGGGTAAACAGATAAGTTCGGTCAAAGCCATGGTGAGCAGGTGCACCCCCGAAGTTAATTTGGATAGTACTAAAAACGCAGTCGTTTGTGAAGCTTGCATCGACTGCCTTAAAGACTACTGCAACTTCTTGGAAAGCTGCGCCAATGTAGAAAGGAGTATAGAGTTGTATCATCGTGAGAATGGAATCGGTGAAAACGAGCAGGTAAACTTGTCCGAGGTATTGGAATTCAATATGACGCATTTTGTAAATGAGGTTAGCGCCGTTTCTGTCCATGTCCCCGTCAAGATGGAAGTAGATGAATTTTGCAACGATGCTTCCGAGACTAGCGAACAGAAACCGTTCCCAAAAATCGAAACgcaagaaataaaaatcgagTCGACTGAAAATTGGCCTTTGACAGAAGATTGTACACGGTACAGTTGTTATGTTTGCGACTACAAGTCGGAACGAAAAAAAGACCTGACCAAACATAAATTGACCCACAAAGACCCGTCGgataaaaaactttataaatgCAATGTGTGCGGCCACAGGATGAAACAAGCGGTTAACATGAAAACGCATATGTTGAGACATAAGGATCCTTCACAGATCGAATGGTTCCGATGCGATTTTTGTGATTACAAATCGAAACATAAATCTTATTTAGCTTCTCATATGTTGGTTCACAAGCAGGATTCAGACATCGATTGGTACACGTGCCAGTACTGCGACTACAAGACGAAACGTAAAGCTCAGTTGAGGATGCACTTCTTGACGCATAAAGATGAGTCGGAAATAAAATGGTACCGATGCGACTTGTGCGAATATAAAGCGAAACAAATctctaatttaaaaactcaCATGGCGACACACGAAGACGCTTCGAATAGACAGAAATACAAATGCCACGTTTGCGGTCATAAAACAACGCAAAAGGTTCATTTGAAAACGCATATGATGCAACACAAGGACGTGTCGGAGATCGACTGGCACGAATGTAATTTGTGCGGTTTCAAATCAAAGTTCCGTTACAGCTTGAAGAACCATATGTTGAAACACGTGGATTCCTTGGAAGTGGAATGGCATAAATGTAACTTGTGCGACCACAAGACGAGGTACCGCGTCGCTCTACGCCGTCACATCCTTTCGATGCATAAAGACCCGTCGCTGGTAAAGTGGTTCGAATGCACCGTTTGCGATTACAAAGCCAAGCAGAAAATTAACCTGCAAACGCATATGCTCCAGCATAAAGACCCTTCGGAGATAAAATGGTACAGGTGCGACCGCTGCGATTATAAAGCCAAGCGGAAAGAACATGTAAACAGCCACATGTTACGACATAAAGACGACTCGGAGATCGATTGGTTAAAGTGCAGCCTATGCGAGTTCCAGACGAAGCACAGAGTCAGTTTGAGATCGCACATGTTGGTGCATAAGGATCCTTCGGAGGTGAAGTGGTACAAATGTAAATCCTGCGACTTTAAAGCTAAACGCAAAACCAACTTCCAAAACCATCTGTTGGTTCATAAGAGCGCGTCGGAGGTACAGTTGCGCAAATGTAGTTTGTGTGAGTTTACAACGAAGCATTCCAGTAGCATGCGTGTTCATAAACTCATGCACAAGGACCCCTCGGAGGTGGAGTGGCACGAATGTCACCAATGCGGCTTTAAAGCCAGACAGAAATCTAATCTGAAGACTCATATGAGGATTCATTAG
Protein Sequence: MNKKPKICRLCCNVSSEENLEEIGELTKDVLDVLLINMNMNVSKRPVMCSCCSGKVHGLFAFKSGCMYTEDFIAPFVDSETQNQVDLKEVYIREKGLKVLVEILRDRNLCRLCMKAVEDKFVSLDGLGKQISSVKAMVSRCTPEVNLDSTKNAVVCEACIDCLKDYCNFLESCANVERSIELYHRENGIGENEQVNLSEVLEFNMTHFVNEVSAVSVHVPVKMEVDEFCNDASETSEQKPFPKIETQEIKIESTENWPLTEDCTRYSCYVCDYKSERKKDLTKHKLTHKDPSDKKLYKCNVCGHRMKQAVNMKTHMLRHKDPSQIEWFRCDFCDYKSKHKSYLASHMLVHKQDSDIDWYTCQYCDYKTKRKAQLRMHFLTHKDESEIKWYRCDLCEYKAKQISNLKTHMATHEDASNRQKYKCHVCGHKTTQKVHLKTHMMQHKDVSEIDWHECNLCGFKSKFRYSLKNHMLKHVDSLEVEWHKCNLCDHKTRYRVALRRHILSMHKDPSLVKWFECTVCDYKAKQKINLQTHMLQHKDPSEIKWYRCDRCDYKAKRKEHVNSHMLRHKDDSEIDWLKCSLCEFQTKHRVSLRSHMLVHKDPSEVKWYKCKSCDFKAKRKTNFQNHLLVHKSASEVQLRKCSLCEFTTKHSSSMRVHKLMHKDPSEVEWHECHQCGFKARQKSNLKTHMRIH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -