Eads013694.1
Basic Information
- Insect
- Exocentrus adspersus
- Gene Symbol
- ZEB2
- Assembly
- GCA_029955175.1
- Location
- JANEYG010000046.1:1113642-1115819[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.36 24 6.3 0.1 2 23 131 153 130 153 0.95 2 13 0.53 36 5.8 1.1 2 23 183 203 182 203 0.95 3 13 1.3e-07 9.2e-06 26.5 0.4 1 23 207 229 207 229 0.98 4 13 0.0019 0.13 13.5 1.9 1 23 235 257 235 257 0.98 5 13 0.035 2.4 9.5 0.5 1 14 260 273 260 275 0.90 6 13 10 6.8e+02 1.8 4.4 3 23 315 332 314 334 0.80 7 13 3.5e-05 0.0024 19.0 1.6 2 23 346 367 346 367 0.97 8 13 0.011 0.72 11.1 1.5 1 23 373 395 373 395 0.98 9 13 1.3e-06 9.1e-05 23.4 0.2 1 23 401 423 401 423 0.98 10 13 3.9e-06 0.00027 21.9 3.4 3 23 430 450 429 450 0.97 11 13 1.8e-06 0.00012 23.0 1.4 1 23 456 478 456 478 0.95 12 13 4.6e-05 0.0031 18.6 1.7 3 23 486 506 484 506 0.97 13 13 0.0023 0.16 13.2 2.5 1 23 512 534 512 534 0.98
Sequence Information
- Coding Sequence
- ATGCATAACTTATCTGTAAATGTACAAAAAAGAACACTTTTCACAAGTTTGTTTAACATCAAGCAAAATAACTTTAGAAAATACCCCAATTTCCTATGCAACGCCTGCGACGATAAACTAAATCTGACCAGCAACTTCCGCCAATGCGTAATGAGAAGCTTGGCTATCCTCGAGGAGTATAACAAACAGATTAATTCCACACCACTCGAGTGTAGCGAAGGCATTAAAGATGAGCTCCAAAATGGAGATACAGACTGTTTTGTGGATACAGATATACACATCGAAACCGAACAAGCAGGCAAAACAGATGCTTCCGACATTAAAATCGTCGATTCTGAACAGGTGGATAAAGCAATAGAAGGGTTTAAAAATAGATTCTCGCAAAATAAAACATGCGTTATTTGTGGATTTGTTGCTGCTAATCGAAGATCAATATCCTCGCATATGGCAATCTTCCACAAAGATACAAAGAATCGATGGTGCTTAGAATGTAACGACATCTTTGAAAATTACGAACACCACAAAGCGAGTCACGGCAGTAGGCAACGATGCCCTTTCTGCGAGAAGAAGGTTACTTTACCTCATTATATAGAACACCTGCAAAGCCATTCAGGTACGTTTGAATGCAAGGAGTGTGGTAAAGCGTTCAAGTCTGGCTCATGGTTGACGAAACATTTACGAATCCACACAAACGAGAAGCCGTACACCTGCCCCAACTGCTGTAAAGGTTTCATACAGCTCAGTTCGCTAAGGTACCATTTAGGCACGCACGGTAAATATTCCTGCGAGGTATGCAAGAAACGTTTCAAGACTGAGGACGATATACCGGGGCACGAATGCGATTCAAAAGCAGAAGTTTGGGTAAATTCGGGTGATGGAAATGAAAGCGAAGTGGAaacaattataataaaagGAGTTGGttCTTTGGATTTACAGAATTTTTGTAAGGATTGTAACAAGCGGGTGAAGAGTTTGGGGCAGCATATGAAGAGGCACCACAGAGTTGCAAATGAGGAACCATCACCGAAAACCGCCACGTGTGAGTTTTGTCAAAAAACGTTTTCCAACTCCAACAAGTTACGGATCCATGCTAGAATCCATACGGGGGAGCTTCCGTACAAATGCAAATACTGTGATAAAAGGGCGCTGTCAAGGTCAAGGCTTGTGGATCACGAACGGACGCATACCAAAGAAAAGCCGTACATTTGTAGCGTTTGCGGGAAAGCTTTGTCTCAATCCTCTGCGCTGAGGACGCATATGAAGCAGCATACCGGAAGGACTGAAATTTGTAACCTCTGCGGCAAATCTTTCTGTAGAAAATCCGAATTGAGGCTACATCTGAGTAAACATAAAGGCGAGAAGCCGTTTTTGTGTACGGATTGTGGAAGAACTTTTGCGCAAAGGAGTCACTTATCAGAACATATGGTGAGCCATAGCGAAAAGCGGCCATTCGGATGTTCTCAGTGTGATAAGCGCTTCAAAACTAACAACCTTCTAAGAGAGCATCTGAAATTGCATCAAGGATACAAGCCGTTTCAATGCCCTTCGTGCCCCTATGCTTGTTATAAAGCGTACCGGCTCCAACAACACATGAAACAACACAATAACGAGTCCTATGATGATGGCCAGTTTCCTGAGCCTGTTGTTGACAAACCTAATTCTGAATAA
- Protein Sequence
- MHNLSVNVQKRTLFTSLFNIKQNNFRKYPNFLCNACDDKLNLTSNFRQCVMRSLAILEEYNKQINSTPLECSEGIKDELQNGDTDCFVDTDIHIETEQAGKTDASDIKIVDSEQVDKAIEGFKNRFSQNKTCVICGFVAANRRSISSHMAIFHKDTKNRWCLECNDIFENYEHHKASHGSRQRCPFCEKKVTLPHYIEHLQSHSGTFECKECGKAFKSGSWLTKHLRIHTNEKPYTCPNCCKGFIQLSSLRYHLGTHGKYSCEVCKKRFKTEDDIPGHECDSKAEVWVNSGDGNESEVETIIIKGVGSLDLQNFCKDCNKRVKSLGQHMKRHHRVANEEPSPKTATCEFCQKTFSNSNKLRIHARIHTGELPYKCKYCDKRALSRSRLVDHERTHTKEKPYICSVCGKALSQSSALRTHMKQHTGRTEICNLCGKSFCRKSELRLHLSKHKGEKPFLCTDCGRTFAQRSHLSEHMVSHSEKRPFGCSQCDKRFKTNNLLREHLKLHQGYKPFQCPSCPYACYKAYRLQQHMKQHNNESYDDGQFPEPVVDKPNSE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -