Basic Information

Insect: Exocentrus adspersus
Gene Symbol: -
Assembly: GCA_029955175.1
Location: JANEYG010000033.1:907907-909690[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.029 2 9.8 0.2 1 20 239 258 239 260 0.94

2 9 1.8e-07 1.2e-05 26.1 0.6 1 23 280 302 280 302 0.96

3 9 1.2e-05 0.00081 20.4 0.1 1 23 308 330 308 330 0.99

4 9 7.1e-06 0.00049 21.1 2.9 1 23 336 358 336 358 0.97

5 9 1.4e-08 9.2e-07 29.7 3.5 1 23 364 387 364 387 0.98

6 9 0.00019 0.013 16.7 0.4 1 20 393 412 393 415 0.92

7 9 8.2e-06 0.00056 20.9 0.4 1 23 421 443 421 443 0.98

8 9 0.0085 0.58 11.4 3.9 3 23 456 476 454 476 0.97

9 9 7.5e-06 0.00051 21.0 2.0 1 23 480 503 480 503 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.029	2	9.8	0.2	1	20	239	258	239	260	0.94
2	9	1.8e-07	1.2e-05	26.1	0.6	1	23	280	302	280	302	0.96
3	9	1.2e-05	0.00081	20.4	0.1	1	23	308	330	308	330	0.99
4	9	7.1e-06	0.00049	21.1	2.9	1	23	336	358	336	358	0.97
5	9	1.4e-08	9.2e-07	29.7	3.5	1	23	364	387	364	387	0.98
6	9	0.00019	0.013	16.7	0.4	1	20	393	412	393	415	0.92
7	9	8.2e-06	0.00056	20.9	0.4	1	23	421	443	421	443	0.98
8	9	0.0085	0.58	11.4	3.9	3	23	456	476	454	476	0.97
9	9	7.5e-06	0.00051	21.0	2.0	1	23	480	503	480	503	0.97

Sequence Information

Coding Sequence: ATGaataaaagtagaaaaattaatttagccAAGGTCTGCCGAACATGCTTATCCGAAAGGAGGCATTTGAAAGAAATACGTACAACTAGAATACCAAAAATGATGGAGAGTTGTGCCTCTGTTCGGgtGTACGAAGATGATGGTTTACCTGGGAACGTTTGCATCACTTGCTTCCATTTGATTGCTAAATTCTACGCTTTTAAAAAGAACATGGAAAGGAGCGATCGAATACTTCGACAGTATATAAAGAATAACAGGATAAAGCAAAGTGATATAATTAACATTGCTCTAAGTGAGGCTGAGATTCATGAAACTGCAGAGGGTATGGAAGGTCCTAACGATAGCTCCCTAATTATGATAAATGAAGCTAAGGCAGAATTTAACGAGGATGACATTCCGTTAAGTACACGCGTTATTGAATTACAAGAGATTGCTAAGAGCCAACTAGAGTTTATCGACAGTAAAACTGGAGATTTACAAGAAATAGATTTTACGCACTCCGACATTGAAGACTTGAAAACGTGTGATACTGTGCAAATATTTACCGATGGTCCTCCACCTCTGGTACCTCTTGCACCTGTTAAAACACACGTACCGGTTGAGACAGTTGTAAAAGATTTACCCAAAGATACGCCCCCATTAGTTCCCATCAAGCCAGTAGTAAATATAAACGTGTTAGAAAacataattattgaaaaatcgaaacATATAACTTATAATTGTAGTACCTGTAGTAAAGAGTATGATTCAGTATCAGCTTTAAAAGACCATAAGGCGAACTCGTGCCAGATTAATACTTTACAATGCCATCTGAAAGGTCATATGGTAGCTAAAGACTACCTCTGTAAAATTTGCGGTAAGCGATATCCAAATCCAAGTACTTTCACTGTCCATATGAGAACTCATACAGGCGAAAGGCCGTTTAAATGCCAAATTTGCGACAAAGGCTTTGTACGTTGGGCTGGTGTTGTGGGGCACATGAAAACGCACGAAGAACATAAACCTTACAAATGTGAATCGTgtggaaaatgttttaaaatctcTTCGAATCTAGAAAgacacaaaattttacattctGGAAATTTACCGTACTCGTGCAGTTACTGTGGAAAATGCTTTAGCCAATCCGACAATCTACAGTTACATATCAGAACGTATCACACTCACGAACGACCTTACCTTTGTAGTCAATGTGGAAAAGGTTTTGTGAGCTCGACGCGGCTAAACCGACACATGTGGGTACACTCTGGTTATAAACCGTATACCTGTGCCTTGTGTCCTAAAGCTTATTCAAACTCGAACGATTTAAAGAACCACGAGAGGAGTCATCTCGGTAAAAAAGGAGACGAGTTCAAGAATTGGGCATGCGACGAATGCAACATGAAGTTTTACCACCCCTGTCGATTAGCCAGGCACAAGAAAACCCACACCAAACCTTACGTGTGCCACATTTGCACCAAGCCGTTCACCTCCAATTCCGTGCTTCTTAAACATATAAAGAATAAGCACGGTTTGATGTACGTCGAGGAGAGTGTGCTACAGCCGGATGAAGGAGTCAGCCAAATATTTGTACAGTGCCAGTCGCAGTCGATAGAGAAAACCGAGTCCTTGTTGGGGTATGAAAAAGTTCAAACTGTCGGAtttgaaaaagaagaagaCAACATTCACTTTCTTTAG
Protein Sequence: MNKSRKINLAKVCRTCLSERRHLKEIRTTRIPKMMESCASVRVYEDDGLPGNVCITCFHLIAKFYAFKKNMERSDRILRQYIKNNRIKQSDIINIALSEAEIHETAEGMEGPNDSSLIMINEAKAEFNEDDIPLSTRVIELQEIAKSQLEFIDSKTGDLQEIDFTHSDIEDLKTCDTVQIFTDGPPPLVPLAPVKTHVPVETVVKDLPKDTPPLVPIKPVVNINVLENIIIEKSKHITYNCSTCSKEYDSVSALKDHKANSCQINTLQCHLKGHMVAKDYLCKICGKRYPNPSTFTVHMRTHTGERPFKCQICDKGFVRWAGVVGHMKTHEEHKPYKCESCGKCFKISSNLERHKILHSGNLPYSCSYCGKCFSQSDNLQLHIRTYHTHERPYLCSQCGKGFVSSTRLNRHMWVHSGYKPYTCALCPKAYSNSNDLKNHERSHLGKKGDEFKNWACDECNMKFYHPCRLARHKKTHTKPYVCHICTKPFTSNSVLLKHIKNKHGLMYVEESVLQPDEGVSQIFVQCQSQSIEKTESLLGYEKVQTVGFEKEEDNIHFL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -