Basic Information

Insect: Exocentrus adspersus
Gene Symbol: -
Assembly: GCA_029955175.1
Location: JANEYG010000005.1:619135-621056[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.0018 0.12 13.5 1.9 1 23 61 83 61 83 0.97

2 18 3e-05 0.002 19.2 0.8 2 21 88 107 87 108 0.95

3 18 0.00017 0.011 16.8 1.0 2 23 123 144 122 144 0.97

4 18 4.6e-05 0.0031 18.6 0.1 1 23 150 172 150 172 0.98

5 18 1.6e-06 0.00011 23.2 0.7 1 23 178 201 178 201 0.98

6 18 0.0095 0.65 11.3 0.7 2 23 208 230 207 230 0.94

7 18 0.06 4.1 8.8 0.2 3 20 239 256 238 258 0.94

8 18 0.0075 0.51 11.6 0.2 1 23 273 295 273 295 0.98

9 18 0.0069 0.47 11.7 0.3 1 23 312 334 312 334 0.96

10 18 0.57 39 5.7 3.1 3 23 341 361 339 361 0.95

11 18 5.8 4e+02 2.5 3.3 2 23 365 386 364 387 0.93

12 18 0.00059 0.04 15.1 2.9 1 23 393 416 393 416 0.98

13 18 0.021 1.4 10.2 5.6 1 23 425 448 425 448 0.98

14 18 0.00099 0.067 14.4 1.7 1 23 454 476 454 476 0.98

15 18 0.01 0.7 11.2 0.8 2 20 486 504 485 506 0.93

16 18 0.014 0.99 10.7 2.9 1 23 519 541 519 541 0.97

17 18 0.00031 0.021 16.0 4.1 1 23 546 569 546 569 0.97

18 18 0.0034 0.23 12.7 0.1 3 23 577 597 575 597 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.0018	0.12	13.5	1.9	1	23	61	83	61	83	0.97
2	18	3e-05	0.002	19.2	0.8	2	21	88	107	87	108	0.95
3	18	0.00017	0.011	16.8	1.0	2	23	123	144	122	144	0.97
4	18	4.6e-05	0.0031	18.6	0.1	1	23	150	172	150	172	0.98
5	18	1.6e-06	0.00011	23.2	0.7	1	23	178	201	178	201	0.98
6	18	0.0095	0.65	11.3	0.7	2	23	208	230	207	230	0.94
7	18	0.06	4.1	8.8	0.2	3	20	239	256	238	258	0.94
8	18	0.0075	0.51	11.6	0.2	1	23	273	295	273	295	0.98
9	18	0.0069	0.47	11.7	0.3	1	23	312	334	312	334	0.96
10	18	0.57	39	5.7	3.1	3	23	341	361	339	361	0.95
11	18	5.8	4e+02	2.5	3.3	2	23	365	386	364	387	0.93
12	18	0.00059	0.04	15.1	2.9	1	23	393	416	393	416	0.98
13	18	0.021	1.4	10.2	5.6	1	23	425	448	425	448	0.98
14	18	0.00099	0.067	14.4	1.7	1	23	454	476	454	476	0.98
15	18	0.01	0.7	11.2	0.8	2	20	486	504	485	506	0.93
16	18	0.014	0.99	10.7	2.9	1	23	519	541	519	541	0.97
17	18	0.00031	0.021	16.0	4.1	1	23	546	569	546	569	0.97
18	18	0.0034	0.23	12.7	0.1	3	23	577	597	575	597	0.95

Sequence Information

Coding Sequence: ATGAACCAAGCCGACGTTTCACCTCCCCTAACACCAGCGTCGGAGATCAAGGAAGAACCCAACGATGCCGACGCCTCGTCGCTGATCTCCCTAGACCTAAAACAAGAGCAGGAAGACGAACCCGACTACGTGGACCTGAGCGTTTTCACCTCCACGAAGCCTAAACCGGAAGAGAAGCGTTTCCACTGTCCCCAATGCCCGAGGAAGTACCACCGTTCCGAGTATCTCGCCCTTCACCTGGCCGTGCACAGCCCTAAGATGACGTGCCACGTCTGCGGCGCCAAGTTCACCGACAGGACAAAGCTGAAGAAGCACATGAACGCTTATATAAAGCACAAGATGGAGGAGGCGAGAAACGAGCAGCTCACCTGCACGTACTGCTCCAAGTGGTTCAAGACGCCGAAGCAGCTCAGACTACATGTGAGGGTACACACAAACGAGAGGCCGTACAAGTGCCAGATCTGCGGCGAGGGGTTCAAGCAGTTGAACGCGCTTGGTAACCACCAGGTCACGCACACCAAGGAGAAGCGGTACACCTGCGAGATATGTAACGGGGCGTATACCACGTCGTCGAGTTTGAGGAGGCATCAGAGACGCATCCACGAGAGGGGAAGGGCGATGAAGTGCGGGTACTGCAAAGGTATGTTTTACAACAGAGCAGATTTTACGACGCACCAGGAGCAGGAACACAATGACGTAAAATTTAAGCGGAATTGTCCTGGGTGTTTCGAAATATTCTATACCAGGACAGCGTTCAAGCAGCACAAGGAGGAGAACGGAGAACATTTCCCTGTAGTGGAACGCGGTGTGAAAACATACACCTGTCCCTTGTGCGGTAAGGAAATTTCTGGTATGAAATCGTACATGGATCATCGTCGGGAACACTTGTCTTACTCTAACGAAGACTTGAAGCAAGCGTACAAATCTAGTTCCTTCCCTTGCAAGTTCTGCCCGGCCGTGTACAAACTGAGGCAGAGCCTCTTCGTACACATGGACGAGCACATGGATAAGACCGTACACTGCGACCTATGCGACAAAGATACCACGCATTACGGCTTGAAGGTACATAAACGAAGAGTACACTCACATATAACATGCAAACACTGCCGGGAGGTCGTACTGGGTCGGAGGGCGTTGTTCTTGCACTACCGCAAGCACCACGCCAAGTCCAAGTCATACCAGTGCCACGTATGCGGAAAAAAGTTCCTGCTGAAGGAGTCACTGGTGCGCCATTTCCGTAGGGAACATAACGTTTCCACCTCCTTTAAACCCTTCAAATGCGGCAGCTGCAGCAAACGTTTCTTCACCCACTTGCACTTGGCGGCGCACAAACGCAAGTGGCACAGCTCCAAGACCGACTACAAGTGCCCGGTATGCGACACCAGCTTCCACACCCTGAAAGAAATCAAGGAACATAACCTCACCCACGACCGAGCTTCGTTCAGGCGTTGCTGGCGCTGCCGCATCTGCAAGAAGATATTTAAATTACGAGGTAATTACCTCCATCACCTTTCGTTGAAGAACTGCATCCAGTTTCTTTCGAAACGAACCCTGCACCAGTGCCAAGTGTGCGGCAAGGAGCTGCATTCGGAGGATACGTGGCGCAGGCACTACCAGCTGCACTCCAGCTTCGAATACCATTGTCCGTACTGCGAAAAGAAGTACAAGCAAGTGGAGTCGATGCGAAAGCACATGTCCAGGCGCCACTCGGGCAAGCAGCTGTTCTGGTGCGACACCTGCGGGAAGGGATTCGAGCAGGAGGGGGAGTTCGAAACGCACTACGCCGGGCATGATGTCAAGGTGGAAGAGGAGATGGTGGTGAAGATGGAGCCGTTCGAGGGAGAGGTGAAGGAAGAGGTTGTGGACTGA
Protein Sequence: MNQADVSPPLTPASEIKEEPNDADASSLISLDLKQEQEDEPDYVDLSVFTSTKPKPEEKRFHCPQCPRKYHRSEYLALHLAVHSPKMTCHVCGAKFTDRTKLKKHMNAYIKHKMEEARNEQLTCTYCSKWFKTPKQLRLHVRVHTNERPYKCQICGEGFKQLNALGNHQVTHTKEKRYTCEICNGAYTTSSSLRRHQRRIHERGRAMKCGYCKGMFYNRADFTTHQEQEHNDVKFKRNCPGCFEIFYTRTAFKQHKEENGEHFPVVERGVKTYTCPLCGKEISGMKSYMDHRREHLSYSNEDLKQAYKSSSFPCKFCPAVYKLRQSLFVHMDEHMDKTVHCDLCDKDTTHYGLKVHKRRVHSHITCKHCREVVLGRRALFLHYRKHHAKSKSYQCHVCGKKFLLKESLVRHFRREHNVSTSFKPFKCGSCSKRFFTHLHLAAHKRKWHSSKTDYKCPVCDTSFHTLKEIKEHNLTHDRASFRRCWRCRICKKIFKLRGNYLHHLSLKNCIQFLSKRTLHQCQVCGKELHSEDTWRRHYQLHSSFEYHCPYCEKKYKQVESMRKHMSRRHSGKQLFWCDTCGKGFEQEGEFETHYAGHDVKVEEEMVVKMEPFEGEVKEEVVD

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -