Basic Information

Insect: Exocentrus adspersus
Gene Symbol: -
Assembly: GCA_029955175.1
Location: JANEYG010000006.1:2534989-2536828[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0047 0.32 12.2 0.2 1 21 130 150 130 151 0.95

2 12 7.7e-06 0.00052 21.0 3.5 1 23 159 181 159 181 0.99

3 12 1.2e-08 7.9e-07 29.9 0.4 1 23 187 209 187 209 0.99

4 12 3.3e-05 0.0022 19.0 2.3 1 23 215 237 215 237 0.98

5 12 0.00076 0.052 14.7 2.8 1 23 243 265 243 265 0.98

6 12 0.0007 0.048 14.8 0.6 2 23 276 297 275 298 0.94

7 12 0.011 0.74 11.1 3.4 1 23 306 328 306 328 0.96

8 12 7.7e-07 5.2e-05 24.2 3.0 1 23 334 356 334 356 0.98

9 12 1.4e-05 0.00095 20.2 0.7 1 23 362 384 362 384 0.99

10 12 9.3e-06 0.00063 20.8 1.0 1 23 390 412 390 412 0.99

11 12 5.5e-05 0.0038 18.3 3.0 1 23 418 440 418 440 0.98

12 12 9.3e-05 0.0064 17.6 0.8 1 23 446 469 446 469 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0047	0.32	12.2	0.2	1	21	130	150	130	151	0.95
2	12	7.7e-06	0.00052	21.0	3.5	1	23	159	181	159	181	0.99
3	12	1.2e-08	7.9e-07	29.9	0.4	1	23	187	209	187	209	0.99
4	12	3.3e-05	0.0022	19.0	2.3	1	23	215	237	215	237	0.98
5	12	0.00076	0.052	14.7	2.8	1	23	243	265	243	265	0.98
6	12	0.0007	0.048	14.8	0.6	2	23	276	297	275	298	0.94
7	12	0.011	0.74	11.1	3.4	1	23	306	328	306	328	0.96
8	12	7.7e-07	5.2e-05	24.2	3.0	1	23	334	356	334	356	0.98
9	12	1.4e-05	0.00095	20.2	0.7	1	23	362	384	362	384	0.99
10	12	9.3e-06	0.00063	20.8	1.0	1	23	390	412	390	412	0.99
11	12	5.5e-05	0.0038	18.3	3.0	1	23	418	440	418	440	0.98
12	12	9.3e-05	0.0064	17.6	0.8	1	23	446	469	446	469	0.97

Sequence Information

Coding Sequence: ATGGCTTTAATCGAcgatatttatataaaagaagAACCGAAGGATGAAACTGAGGACGTGAAACTGTCCAAATCCCCTGCAATACCTCTAAAGCTTGAAGCAGACAATTTATTGCAGGATAGACCAGAATATGTTAGTCTGCCAAGCGCTGAATACAACGTAGATGACGCAGAAGATAAAGCATGGCACGGCAAAGAAGCGACTCCTAAAAAGGACATGAATCAACCTAGCGTAAGCACCAATATCCACCGTGTGGCTGATTACTCTTGTGAGCAAGGCAAAGTTGAGGAAGATCTCTCACTTCAGACCACCACGAAAGAACCGGCTACCGAATCACAAGAAAAAACAGAATCAGAGGATTCCTTCAGCGATGACAGCGATGAGGGATTTGTTTGTAAAGTTTGCAAACAAAGGTTTGTGGATGATTTCCTGTTGGAGCTTCACATAAAATCTAGGAGAGTGACAGAAAAGTGTTACAAATGTTGCGGCTGTGACAAGCAGTTTAGGGACAATACACAGTTGACTGTTCATGCTCGGAAACACACCGGCGAGCAACCGTACGTTTGCAACATTTGCGGGAAAAAATTCTCCGTTAGTGGTAATTTGAGCAAACACATGCGCATCCACACAGGGGAAAGGAAATACGAATGTGATACCTGCCAACGAAAGTTCACACAGTTTGCCCATTTGGAAGACCACTTGAAGATACATTCAGGCGATCGACCATTTGTTTGCGATTTTTGTAACAGCGGATTCAAAACGAAAGCGAGGCTGAAAAAGCATAGAAAATCCCACGAAGCTGAGAAGATTACTAAGAGATCCGTGCCGTGTCAAGTTTGTAACAAAATAATGAAGAGCTCAAAACAACTTATAGCCCATATGGATACCCATCACGAAGAGGGTAGTTCTAATCCTTTCTTTTGTGGTATTTGCGGAAAAAGTTACAAGCACATGTTCGCCTTAAATTTCCACTTGAAGAAGCATGGAGGTATTCGTGACTTCAAGTGCAACTTATGCGACAAGACCTTAAGCAATGCAAGCCATTTAAGAAGGCACCTAAATTCTCATTCGGGTGTAAGACCTTACAGCTGTGAATTATGCATGAGAGCTTTTCCGTCTCGACAAAACTTGAATAGACACATGATGACGCATACAGGAGAAAAGCCATACTCGTGTCAAGAATGTGGCAAGGGTTTCCTTAGCTTGGAGAATTTGACCCGACACAAAAGGACGCATACTGGTGAAAAACCTTTCCCCTGTCATGTTTGTGGAAAATTTTTTGCTCATAGTACAACAGCTAAAGAGCATCAACGAATTCACACCGGCGACAAACCTTTCAAATGTAGCATCTGCAGCAAGCGATTTGCGCTGAATAAGGCGCTTTACAAACACGTCCGCGAATGGCATCCAGTGTACTTTCCAGAGTTCAAACGTCTGAATGATCTACCTCCAAACGTAAGACGCGCCAGGGAGAAAATGAAGAGAGAACTGGAAGAGGTGGACGTGAAGAATGTGACTCTGGTGGCGGATGTGAGCGTGACAACTGATGTTAAAAGTGATTTAGTTAAGAAGTACGAAGATTTCGATGACGAGGGAAGGGCGGATGAGATACCTTTCATCAAAGTTGAAAAACAGGAATTGGACGATTGTTGTTGA
Protein Sequence: MALIDDIYIKEEPKDETEDVKLSKSPAIPLKLEADNLLQDRPEYVSLPSAEYNVDDAEDKAWHGKEATPKKDMNQPSVSTNIHRVADYSCEQGKVEEDLSLQTTTKEPATESQEKTESEDSFSDDSDEGFVCKVCKQRFVDDFLLELHIKSRRVTEKCYKCCGCDKQFRDNTQLTVHARKHTGEQPYVCNICGKKFSVSGNLSKHMRIHTGERKYECDTCQRKFTQFAHLEDHLKIHSGDRPFVCDFCNSGFKTKARLKKHRKSHEAEKITKRSVPCQVCNKIMKSSKQLIAHMDTHHEEGSSNPFFCGICGKSYKHMFALNFHLKKHGGIRDFKCNLCDKTLSNASHLRRHLNSHSGVRPYSCELCMRAFPSRQNLNRHMMTHTGEKPYSCQECGKGFLSLENLTRHKRTHTGEKPFPCHVCGKFFAHSTTAKEHQRIHTGDKPFKCSICSKRFALNKALYKHVREWHPVYFPEFKRLNDLPPNVRRAREKMKRELEEVDVKNVTLVADVSVTTDVKSDLVKKYEDFDDEGRADEIPFIKVEKQELDDCC

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -