Basic Information

Insect: Exocentrus adspersus
Gene Symbol: -
Assembly: GCA_029955175.1
Location: JANEYG010000007.1:3137819-3140414[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 18 0.41 28 6.1 0.1 2 23 56 77 55 77 0.95

2 18 0.13 9 7.7 4.0 1 23 83 105 83 105 0.98

3 18 0.019 1.3 10.3 3.1 1 23 111 133 111 133 0.89

4 18 8.4e-05 0.0058 17.7 2.9 1 23 139 162 139 162 0.96

5 18 6.6e-05 0.0045 18.1 1.6 1 23 174 197 174 197 0.95

6 18 0.0033 0.23 12.7 1.3 3 23 208 228 207 228 0.99

7 18 1.4e-07 9.3e-06 26.5 0.7 1 23 234 256 234 256 0.98

8 18 1.5e-05 0.001 20.1 0.7 1 23 262 284 262 284 0.98

9 18 0.17 11 7.4 1.0 2 21 295 314 295 315 0.92

10 18 0.0091 0.62 11.4 1.2 2 23 368 389 367 389 0.96

11 18 0.016 1.1 10.6 2.8 1 23 395 417 395 417 0.98

12 18 0.033 2.3 9.6 1.3 1 19 423 441 423 445 0.75

13 18 0.00038 0.026 15.7 3.0 1 23 451 474 451 474 0.97

14 18 3.7e-05 0.0025 18.9 0.7 1 23 486 509 486 509 0.97

15 18 0.11 7.3 8.0 0.8 3 23 520 540 518 540 0.96

16 18 9.8e-06 0.00067 20.7 0.4 1 23 546 568 546 568 0.98

17 18 5.6e-06 0.00038 21.4 3.8 1 23 574 596 574 596 0.99

18 18 0.00022 0.015 16.4 0.0 2 22 603 623 603 623 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	18	0.41	28	6.1	0.1	2	23	56	77	55	77	0.95
2	18	0.13	9	7.7	4.0	1	23	83	105	83	105	0.98
3	18	0.019	1.3	10.3	3.1	1	23	111	133	111	133	0.89
4	18	8.4e-05	0.0058	17.7	2.9	1	23	139	162	139	162	0.96
5	18	6.6e-05	0.0045	18.1	1.6	1	23	174	197	174	197	0.95
6	18	0.0033	0.23	12.7	1.3	3	23	208	228	207	228	0.99
7	18	1.4e-07	9.3e-06	26.5	0.7	1	23	234	256	234	256	0.98
8	18	1.5e-05	0.001	20.1	0.7	1	23	262	284	262	284	0.98
9	18	0.17	11	7.4	1.0	2	21	295	314	295	315	0.92
10	18	0.0091	0.62	11.4	1.2	2	23	368	389	367	389	0.96
11	18	0.016	1.1	10.6	2.8	1	23	395	417	395	417	0.98
12	18	0.033	2.3	9.6	1.3	1	19	423	441	423	445	0.75
13	18	0.00038	0.026	15.7	3.0	1	23	451	474	451	474	0.97
14	18	3.7e-05	0.0025	18.9	0.7	1	23	486	509	486	509	0.97
15	18	0.11	7.3	8.0	0.8	3	23	520	540	518	540	0.96
16	18	9.8e-06	0.00067	20.7	0.4	1	23	546	568	546	568	0.98
17	18	5.6e-06	0.00038	21.4	3.8	1	23	574	596	574	596	0.99
18	18	0.00022	0.015	16.4	0.0	2	22	603	623	603	623	0.95

Sequence Information

Coding Sequence: ATGAAGATACTGTTAGCAAAGGAAGGCCAGGCAGGAAGAAGGGCTCAAAAGTTTCTAAAATGCACCATGACAAGGAACCCAAGAAGAAGCGTTCCCGCAAGAGCGACAGTCCTAAAAAAGATAATCATGAATCATCCCCCACCCATGCAGCTGGACGAGCCCATACAATGCGACGTCTGCAGTGCTTCTTACATGAACAACGTCGACTACGCTCTTCATTCCCTGAGCCACAGTGAAGACAACAAATATACCTGCCATCTTTGCAACTACAGGAACGGATCCAAGTACCACTTGGAGATGCACGTGAGGGCGCACGAGGGTACCACCAAGTTTAAGTGCGAGATTTGCAAAAAGTCGTTTACCATAAGTACCCACGCTATCGAACACAAGTATTTCCACACAGGCGAGAAGCCGTTCCAGTGTGAAATCTGCGGGAAGCACTTCATGTTCTCCTGGCATCTGGCTTCTCACCGCAGAGCTTCACACTACGAAATCCTTACAGGTAAACCGCTCGTGAAATTCGACTGTCCTATTTGCAAAAAACATTACGAGTCCGCCAGTGGATTGCGAAGACATACTATAAAGAAACACAGGCACAATGAAATAGATTTATCGGTGCTGTGTGATGTATGCGGGAAGAGACTGTCTAGTAGGGAAAAGCTCAAGTTCCACCTGAGAACGCATACTGGATACAAACCATACGCGTGCCACGTGTGCCCCAAGAGCTTCTCCAAGAAGGATCAATTGATCGAGCATATTCGGGTTCACACCGGGGAGAAGCCGTATGTCTGCAAACTTTGCGGGAAGAGATTCGCGCAGAGGACGCCACTCAAAACTCACGAGAAAATCCATTCTGGGGACAGGGCTAAGAACGCGAATAACGTCTGTACGGTTTGTGGCCAGTCGTTTTTAACCAAAATGGATCTGCAGTGTCACATGAAGAGCTGTGTTGTTGCCAATTTGTATCCGAGATGGAAACGGCGGAGGAAGAAAATAAAGAGGGAGTCGTACATCAACAACAAAACCCCGCGGAAGAGAAAATCCCGCAGAAAAACCGAGAGACCCATCAGCGTGGAGCCGTTGAGATTGGATGTCCCCATCAAGTGCGAAACTTGTAATACGAAATTCTACACTAATATCGAGTTTGCAACGCATTCCTCCACTCACAGCCCAGACGGGAAATATTCCTGTCACTTGTGCGACTACAAAAACACTTCCAAGTACCGCTTAGAAGCCCATGTGCGTATGCACGAAGGATCAGCAAAGTACAAGTGCGAGATGTGCGGCAAAGCCTTCAGGATAGGCACGCATGCCATCGAACACAAGTTTTACCATACAGGCGAAAGACCGTTCCAATGTGAGATATGCGGGAAGCACTTCATGTACTCCAGAAGACTAGCTTCGCACCGCCGTAACTCGCACTATCAACTTCTCACAGGCAAACCGAAAACAAAGTACACTTGCGAGCTGTGCGACAAAACCTTCGAGTCGCTACCGGGTCTTAACAACCACAGGAACAAAAAACACCGCAACATACAATCGGACATATCGGTCATATGCGAAATTTGCGGGAAGCAGATTTCTTGCAAAGGCAGGCTTAAGTACCACTTAAGAATACACAGCGGCGACAAACCGTTCTCTTGCCCTGTCTGCTCTAAGAAATTTGCCATGAAGGATCTGATGACCGAACATATGAGGGTTCATACAGGAGAGAAACCGTACACGTGTTCGTACTGCGGCAAGATGTTTGCGCACAGGTCGCCTTTTAGGTACCACATCAAGACCCACACCGGGGAGAAACCCAACGTGTGCCCTATATGCGGGAAGGGCTTTATTTCCAGGGCCGGCATGAACAGCCACATCAAAACCtgctataaaatttaa
Protein Sequence: MKILLAKEGQAGRRAQKFLKCTMTRNPRRSVPARATVLKKIIMNHPPPMQLDEPIQCDVCSASYMNNVDYALHSLSHSEDNKYTCHLCNYRNGSKYHLEMHVRAHEGTTKFKCEICKKSFTISTHAIEHKYFHTGEKPFQCEICGKHFMFSWHLASHRRASHYEILTGKPLVKFDCPICKKHYESASGLRRHTIKKHRHNEIDLSVLCDVCGKRLSSREKLKFHLRTHTGYKPYACHVCPKSFSKKDQLIEHIRVHTGEKPYVCKLCGKRFAQRTPLKTHEKIHSGDRAKNANNVCTVCGQSFLTKMDLQCHMKSCVVANLYPRWKRRRKKIKRESYINNKTPRKRKSRRKTERPISVEPLRLDVPIKCETCNTKFYTNIEFATHSSTHSPDGKYSCHLCDYKNTSKYRLEAHVRMHEGSAKYKCEMCGKAFRIGTHAIEHKFYHTGERPFQCEICGKHFMYSRRLASHRRNSHYQLLTGKPKTKYTCELCDKTFESLPGLNNHRNKKHRNIQSDISVICEICGKQISCKGRLKYHLRIHSGDKPFSCPVCSKKFAMKDLMTEHMRVHTGEKPYTCSYCGKMFAHRSPFRYHIKTHTGEKPNVCPICGKGFISRAGMNSHIKTCYKI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -