Basic Information

Insect: Exocentrus adspersus
Gene Symbol: -
Assembly: GCA_029955175.1
Location: JANEYG010000021.1:1119539-1121610[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 16 0.00083 0.056 14.6 1.4 2 23 138 159 137 159 0.97

2 16 0.036 2.5 9.4 2.6 2 23 165 187 164 187 0.91

3 16 0.00023 0.016 16.4 0.6 1 23 199 222 199 222 0.94

4 16 3.5e-05 0.0024 19.0 0.3 2 23 237 258 236 258 0.96

5 16 0.0052 0.35 12.1 3.3 2 23 265 286 264 286 0.97

6 16 1.8e-06 0.00012 23.0 1.5 1 23 294 316 294 316 0.99

7 16 2.6e-08 1.8e-06 28.8 0.3 1 23 321 343 321 343 0.98

8 16 0.015 1 10.6 5.4 1 23 349 371 349 371 0.98

9 16 2.5e-06 0.00017 22.6 1.6 1 23 377 399 377 399 0.98

10 16 0.00012 0.0084 17.2 2.2 1 23 405 427 405 427 0.97

11 16 6.3e-06 0.00043 21.3 0.8 3 23 435 455 433 455 0.96

12 16 4.2e-07 2.9e-05 25.0 0.1 2 23 461 482 460 482 0.97

13 16 4.2e-05 0.0028 18.7 1.3 1 23 488 510 488 510 0.98

14 16 3.9e-06 0.00026 22.0 1.4 1 23 516 538 516 538 0.99

15 16 4.1e-06 0.00028 21.9 1.3 1 23 544 566 544 566 0.98

16 16 8.4 5.7e+02 2.0 0.0 1 20 572 591 572 593 0.90

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	16	0.00083	0.056	14.6	1.4	2	23	138	159	137	159	0.97
2	16	0.036	2.5	9.4	2.6	2	23	165	187	164	187	0.91
3	16	0.00023	0.016	16.4	0.6	1	23	199	222	199	222	0.94
4	16	3.5e-05	0.0024	19.0	0.3	2	23	237	258	236	258	0.96
5	16	0.0052	0.35	12.1	3.3	2	23	265	286	264	286	0.97
6	16	1.8e-06	0.00012	23.0	1.5	1	23	294	316	294	316	0.99
7	16	2.6e-08	1.8e-06	28.8	0.3	1	23	321	343	321	343	0.98
8	16	0.015	1	10.6	5.4	1	23	349	371	349	371	0.98
9	16	2.5e-06	0.00017	22.6	1.6	1	23	377	399	377	399	0.98
10	16	0.00012	0.0084	17.2	2.2	1	23	405	427	405	427	0.97
11	16	6.3e-06	0.00043	21.3	0.8	3	23	435	455	433	455	0.96
12	16	4.2e-07	2.9e-05	25.0	0.1	2	23	461	482	460	482	0.97
13	16	4.2e-05	0.0028	18.7	1.3	1	23	488	510	488	510	0.98
14	16	3.9e-06	0.00026	22.0	1.4	1	23	516	538	516	538	0.99
15	16	4.1e-06	0.00028	21.9	1.3	1	23	544	566	544	566	0.98
16	16	8.4	5.7e+02	2.0	0.0	1	20	572	591	572	593	0.90

Sequence Information

Coding Sequence: ATGACAGAtttaaaatctatgtttaACAGCATCTCTTTGGACAATATACAAAATGTGTGTAGAATATGCGTGACCCCAGTTCAGAAGAACAGCATCTTGATATTTGAAAACATGGACATACCGCAAAAAATCATGGCTTGTGCTTCAGTTAAGGTTGTTGACGGAGATGGTTTACCTTCTCGTATTTGCAAAACGTGCTTCGACTCATTGAATAAAGCATATCTGTTAAAGGAACAATGCGAGGAGTCAGACAGAGTGTTGAGAAATTGCTTATCTTTATCGGATAAAATCTGTAACGACCAAGACGACTCTGACTGCGATGCAAATGATGTGGATAACGACTTTGATTGTCCCAGTTCAGAACCGGGCAACAGTGGTAAGGATGTTGAGACAGTACCATCGACAGAACTAAAGTGTAACAACTGCCAAAGCGTATTCCAGAAATTAAACCAGTTGAAATTGCACATGCGGGTGCATAAGAAGAAGATCTGCAATTGCAAACTGTGTTTGGAATCGTTTAATTCTTCGTACGAGCTGTCTCAGCATAATAAACTAGAACATAGCACAGTTAAAAGAAAAGTGGAAGAAACAACGCATGTGTGTTCGGTTTgtgatgaaaaatatacaagcaACACGACTTTAATAGACCACATGCTTGCAAAACATACAGagaaaaaagtaaatgtaTCGGACAAATCGAGCGAACTTGTCtgtaatatttgtaataaaacttACTTGAATCGCAGCAACTTAACGGCTCACATGGGGATGCATACAGGCGACAAACCCTTAGAGTGTAAGATTTGCAAGAAAAGGTTCACGCAGGGAAGAGCGTTTGCATGCCATATGAGGACGCATTCAGATGAAATTGAGAAACCGTTCAAGTGCGATACGTGTCAAAAGCAGTTCCCACAGGAAAGTCAGTTGATGGTTCACATGAAGAAGCACAGTGGGAAGAAATACGTTTGTAATATATGCGGGAAAAGCTATAGTAATTCGGGTAATTTGAAGGGTCACATGCGGTTGCACACTGGAGACAAGCCGTACACCTGCCATATTTGCAATAGACAATTTGCTCAAAGCAACGCCCATTCCTACCATATGAAAACCCACTTTGGCGAGAAACCGTTCTCTTGCGAAACTTGCTCAAAAACTTTCACAACTAACGGCCAGCTCATAAACCATCGACGCTTACATACGGGTGAAAGGCCGTTTGCTTGCACGATGTGCCCGAAGAGATTCACGCAAAAATCTGCTTGTACTATTCACATAATGACCCACACCGGAAACAAACCGCACCTTTGCAGTATTTGTGGGAAAAAGTACACTCAAGGCAGCCAACTTGCAGAGCATATGAGAATACACAATGgtgaAACGCTGCAGTGCAGCGTCTGTGGGAAAGCCTACACGACCACAGGCAACTTGGCCGCTCACATGCGCATCCACTCGGGCGTCAAACCCCACGTCTGCGATATTTGCAACAAAGCATTTTACGTCGCCAACAAACTGGCCAAGCATAAACGCACCCACACGGGCGATAAGCCTTACAGTTGCAACGACTGCTCTAAAAAGTTTGGTTCTTTGGATTCGTTGAAAATTCATACCAGGACTCATTCGGGTGAACGCCCTTACGCCTGCGATTATTGTGATAAGAGCTTTATAAGTGCCTCGCATCGTACAGCGCACGTAAAGACTCACCGCGAAATAAAATCGTACGTTTGTGGAGCGTGTTGTACTGCTTTCGTAAGCCCTGCGGAGATAACAGCTCATCAGACTGTGTGCGACAAAGTTGTGAAGGATACGTTTATTGCGTTGAACGGAGAGTTTATTTAA
Protein Sequence: MTDLKSMFNSISLDNIQNVCRICVTPVQKNSILIFENMDIPQKIMACASVKVVDGDGLPSRICKTCFDSLNKAYLLKEQCEESDRVLRNCLSLSDKICNDQDDSDCDANDVDNDFDCPSSEPGNSGKDVETVPSTELKCNNCQSVFQKLNQLKLHMRVHKKKICNCKLCLESFNSSYELSQHNKLEHSTVKRKVEETTHVCSVCDEKYTSNTTLIDHMLAKHTEKKVNVSDKSSELVCNICNKTYLNRSNLTAHMGMHTGDKPLECKICKKRFTQGRAFACHMRTHSDEIEKPFKCDTCQKQFPQESQLMVHMKKHSGKKYVCNICGKSYSNSGNLKGHMRLHTGDKPYTCHICNRQFAQSNAHSYHMKTHFGEKPFSCETCSKTFTTNGQLINHRRLHTGERPFACTMCPKRFTQKSACTIHIMTHTGNKPHLCSICGKKYTQGSQLAEHMRIHNGETLQCSVCGKAYTTTGNLAAHMRIHSGVKPHVCDICNKAFYVANKLAKHKRTHTGDKPYSCNDCSKKFGSLDSLKIHTRTHSGERPYACDYCDKSFISASHRTAHVKTHREIKSYVCGACCTAFVSPAEITAHQTVCDKVVKDTFIALNGEFI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -