Eads010924.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Exocentrus adspersus
Gene Symbol
ZNF236
Assembly
GCA_029955175.1
Location
JANEYG010000031.1:665277-671034[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 25 0.052 3.5 9.0 2.4 1 23 131 153 131 153 0.97
2 25 0.025 1.7 10.0 0.3 1 23 159 182 159 182 0.93
3 25 1.1 77 4.8 2.4 2 23 189 212 188 213 0.92
4 25 0.045 3.1 9.2 0.1 1 23 218 240 218 240 0.97
5 25 0.04 2.7 9.3 0.3 2 23 252 273 251 273 0.93
6 25 2.7e-06 0.00018 22.5 1.1 1 23 300 322 300 322 0.97
7 25 1.4e-06 9.2e-05 23.4 2.1 1 23 328 350 328 350 0.98
8 25 0.0023 0.15 13.2 0.2 1 23 356 379 356 379 0.96
9 25 0.76 52 5.3 1.4 1 23 390 413 390 413 0.95
10 25 4.4e-07 3e-05 24.9 1.9 1 23 507 529 507 529 0.98
11 25 0.0012 0.085 14.1 1.1 1 23 535 557 535 557 0.99
12 25 0.00034 0.023 15.8 0.7 1 23 563 585 563 585 0.99
13 25 0.0012 0.081 14.1 2.0 1 23 665 687 665 687 0.95
14 25 8.9e-06 0.00061 20.8 1.1 1 23 693 715 693 715 0.98
15 25 1.3e-05 0.00088 20.3 0.4 1 23 721 743 721 743 0.97
16 25 0.011 0.78 11.0 3.2 1 23 749 772 749 772 0.95
17 25 4.3 3e+02 2.9 1.4 5 20 1011 1026 1008 1028 0.87
18 25 0.2 14 7.1 0.2 2 23 1081 1103 1080 1103 0.96
19 25 3.6e-05 0.0024 18.9 3.6 2 23 1113 1134 1112 1134 0.97
20 25 5.8e-06 0.0004 21.4 2.6 3 23 1142 1162 1140 1162 0.98
21 25 7.3e-05 0.005 17.9 1.4 1 23 1169 1191 1169 1191 0.97
22 25 0.12 8.2 7.8 0.8 1 20 1197 1216 1197 1220 0.89
23 25 0.00045 0.031 15.4 1.6 2 23 1386 1408 1385 1408 0.96
24 25 0.075 5.1 8.5 0.2 1 23 1414 1436 1414 1436 0.93
25 25 0.014 0.96 10.8 1.2 1 23 1442 1465 1442 1465 0.97

Sequence Information

Coding Sequence
ATGTTGACACTAACAAACAACCAGTTAATAGCAAGTAATAATGATAGAGAAGACTTGGCTACATTCGTAGCGATACCTGCAAATTCCTTAAAGCACCCAAGCGAATACACAGATTTGAGAGTGGTTGAAAATATCGTCCTCAAACAGTTACCGGATGGATCAATATTATACTTAACAGAGACTGGGAAGCAGCAGGTGGCCGAAGAAACGTACGTGACCGACACTGTGCCATTAAAGTTAATCAATGATCAGCCAGAGAAAGAAATTGCTAGAAATCGTACCATTTTATTGCATCCTCCGATGAGGAAACAAGATAAGGATAAGCTTCCGACACGACcaacaaataaagaaaaaccgATCAGAGTAGAACCGAAACCAGAGCATTCTCaatataaatgtataaaatgtgATAACTCTTTTGATACAATCGAACAGTACCATAATCACATGAGGTGGCACAAATGCCAAAAGAAGTTTAGGTGTGAGAAGTGTCCCATGGGATACAACGTGGAGAACAATCTTAAGATACACACGACTCTGATGCATTCCGAGGGAAATACGACAAAATGTCCTGTGTGCCATATCACCCTAACATTCCAGAGGATGGCGAGTTTAAAGTCGCATCTACTTCTGCATCACACCGAAGAGTTTTACACATGCGACGATTGTGAAGGAGAATATGACAAAGAGgaGGATTTTATCAAACACATGGAAGCGCACTgttcgaaaaaaataaagtatccAAGGCCTTTAACTTGTCCTTATTGTAAATTAGAGTTTGACGACGTCAAGGAATTCAGGACGCACGTTACAGATCATATGAAACTGCGTAAAACAGTTTTGAAGAATAGGAGACAGAGAAAATCAGGAACAGGTGGTAAAAAGGAGGAATCTAATCATGTCTGTGTTATCTGCAACAAGAGTTTTATCAAGAATTCATTATTGGAGAGGCATTTGAGGATTCATAGTGGAGAGAAGCCTTACAAGTGTCAATACTGTGATAGAAGCTTTACCCAGAAAGGTACTTTGCAAATTCATCTTAGTAGACATGCTGGCGTGAAGCCGTTCGCTTGTACCTTATGCCCTGCTCGATTTAATCAAAAAGgtaatttAGGAGTTCATGTGCAAAAAACTCACACTTTCCCAGCTGAGAAGGACCAGAAGATGTTCAAGTGTTCCCAGTGTGCctgtatctttaaaaaaatcgctaCTCTAAACGGTCACGTAACCAAAGCTCATCTTAACAGTAAAGACACTTCCCAATTGGATGATAATCTCATCGAAGACGTCATTTCCAAGCTCAAAGAACTGGAACAGCAAACTTCCGGCAATGTAACAGCTAAGTTTCCCGCGAAAAATAAAGAGAACAAGCCAAAGGAACATGttgttattgaaaataagggcGTGGAAGTGCCGGATTTTGATAAAGgcaattttattcatttaacGGAGTCTGCAAATGATGGTACAGTGAGGAGATATCTGGTGCGGCAGATGAAAGTGGATGATATTCGTTGGTACTTTTGCAATTACTGCTCCAAACAGTTTAAGAAGCCCTCGGATTTGATCAGGCATATGAGGGTGCACACAAAAGAAAAGCCGTTTAAGTGCGAGCAGTGCAACGCGGAATTCACGTTAAAGACAACCTTGCTTTCCCACGTCAAAACCCATACCAACAAAATGGACTACACCTGTAAAATATGCAATTCCTCTTTCATTTCTCTTAGGGTATTGAATGCGCATCTCAGaAAGCATGATTTTGAATCCCTGCCAAAGTGGCAGTGCATAACTTGTGGGTATTTGTTCAATCAGTCAGAAGAAGGAGTCGAACACAGGGAGAAAATGGGTCGTGATAAACCGCACGTGGTCCAACCGTTCAGAAACACCATCATGAAGCAACCGTTATACCAAACAACTTATGGTTTCTTGACGTTCAAGCCTCCGAAACACCCGGTGCCCAACACTGGTTCCGAATCACCCACACTCCGGCCCTTCCATTGTGCTATATGCGACGCGAGATTCACCAAGAGGATTAACCTAAAGAGACATGTCCTGTTCCACAACAGTGACCGGAACTTCAAGTGTAATTTATGCCCTAAGACCTTTATCACGTCGTACGGATTGAAAGAGCATTTAAATTATCACAACAACGTGAAGAATTATGCGTGCAAGCAGTGCGATAAGAAGTTTGTCACTGCGACTCTTCTGAAGAGGCACGTTATCATCCATAACAACCATAAGCCCTATCAATGTCCCTACTGTACAAAGAAGTTCAAGACGTTGCTGTTGTGTCGGATACATATAAATCGGGTACACATGAAGGAAGTCATTAAGAAGttaaattcAGAGTCCGAAAATCTTGTAGTGGGACTGCAGCCTAGAGCAGGTCAGAATAATGCTGGTATGGTATCAGTTGCTTCAGAAATTAATGTGCTTCAGAACCTGCCACACACCGCCGACAACGAAAACATGACGATGCTGGCTCCTGAAGGAAACAACTGCATCCAAATCATGAATGCAGACGGCACTCTAACCGACGTCAATAAATATTCCACCGTCTTCGTCAATATGAACGACTTACAGTTCCTCGACAACTCCAACTTAAATTTAACCAGTGAGAATACAGGATCTCTGTTGAACCCGCAAGAAAACTTACAAGTGAATGATATAATCTTCGATATTGATTTAAAACCTGGTTTAAGTTTACCTCCCGAGGAAATATTTGAAGCTTCCATCGAAGCGGAGCAGGTTTCAAATGCTTTACCGAGCGCAGCTGATGTTTCTACTAAATTAGTAAAACTGGATAACTTCTCTGAGGAAAATACCGGTGCCAACACCTCTATTTTAAACAACAGTAGTGACTTGTATtcgaatattaattttaatagttgTTTAAGTTTACCTATAACAGTAGGAGAAAACGATGCGATTTTAGATGCAAATACATCGAGTACTGTGCTTCAACAAGCCTGCGCCGCTGATATGAGCCACGTTGACAATATCTACGAAAGCACAAATATAATGTGTATAAATTGCAGTAGGATGTTTACAAGCTTTGATACTTTCCAAGCGCATAACTGCACTTTGATAAACAATGACACTGTACAGGATAAAAATGAACACGAATCCAAGGAGTTAATTCCTGACGGATTTGATCAGAACCGGGAATTGAATTTGAAAGAAACGATTGAAGATAAATCGTTTTCTAATTCAAAGACTCGTAACGTCAAGTCTAATATCACTTGTAATACTTGTAAGACTGTTATGAATAGCAAGGCTGAGTACGTAAAGCATTTAGCGACGGCGCACAAGGCGCGTAGGGGTAGCGGGACGAAGAgttgtaaattttgttttaaggACTTTAAAAAACCTTCGGATTTGAAAAGGCATCTCAGGACGCATACCGGGGAAAGGCCGTTTGGGTGTCACATGTGCggaaaaactttttctttaaagTCAACCTTGGAATCTCATATAAAAACGCACGATCCGGCTCCTAAGCGGTACAACTGTAACGTTTGCAGTTCGTTTTTCTCGTCAAAGTCTAGTTTGAAGGTGCACATGATGTTACATACTGGTCAGAAACCTTATAGCTGCTCATTTTGCGACCTGAAGTTCAGGACCGTCGGCAACAGAAAATCGCACGAGGTCCTCATGCATTTATCCAAATCAAGGAAAAGCGGACAAAGTAAACAAACCAAAGTTAAAAACCTATTAGAGTCCGTAGCTTCAGGAATTATTAGCAGTCTATCCGAAATCCAGCCCAATCCCGATAGTTGCCTCGAAGATAACAGGGATCACGTTGAAAACACACCCACAAAACTAGGCATCGAAGAACAAGACCTTTCTTCTCAAGTATTAACTACAGAAAATTTACTATCCACGCTGCAAGACGACTCTCTCCCTATGGACCCGGTCCTTCTCCTCCAACAGCTTCAAATGTCAGGCCTAGTCCTCACCAACGAACACAATGAACCGGTATCCACGCTTCTACTAGATGACGGCACAATCCTCAACATTGACGGCATGAAGGACTCCATCCCCGAATTGTCTTTACAACCAGCAGAAATACAAGAACcggaaaatatgaatattaacaATAACAACGTACCGGTACCAGCAGTAGCTAAACCTCCCGAAAAAGTTAGGAATTTAGAGTGTGATATTTGTCACAAAATGTACGCGTCCAGGGATGTGCTTAGGAAACACAGGAAAAAGGTGCACGGGGTTAATAAGAAGTATCCGTGTATCAAGTGTGATCGGGCGTACGATACACAGGATGAGCTTGGGAAGCACAATAAGTGGCATGATGGGTATCGGGCGTTCTCATGCGCGTATTGCACTAACAGCTTTATGGAGGAATCTCGGTTGAAAGTTCATATGAAGAGgATGCACCAGCATTCAAATGCTACAAAGACTACTACAAGTGCTTTATTGGATGTTAACTTTGATTTAGCATCAGAGAACATAGACGATCCTTtgcttaataatttatttactttcaaaAAGATTGTGTAA
Protein Sequence
MLTLTNNQLIASNNDREDLATFVAIPANSLKHPSEYTDLRVVENIVLKQLPDGSILYLTETGKQQVAEETYVTDTVPLKLINDQPEKEIARNRTILLHPPMRKQDKDKLPTRPTNKEKPIRVEPKPEHSQYKCIKCDNSFDTIEQYHNHMRWHKCQKKFRCEKCPMGYNVENNLKIHTTLMHSEGNTTKCPVCHITLTFQRMASLKSHLLLHHTEEFYTCDDCEGEYDKEEDFIKHMEAHCSKKIKYPRPLTCPYCKLEFDDVKEFRTHVTDHMKLRKTVLKNRRQRKSGTGGKKEESNHVCVICNKSFIKNSLLERHLRIHSGEKPYKCQYCDRSFTQKGTLQIHLSRHAGVKPFACTLCPARFNQKGNLGVHVQKTHTFPAEKDQKMFKCSQCACIFKKIATLNGHVTKAHLNSKDTSQLDDNLIEDVISKLKELEQQTSGNVTAKFPAKNKENKPKEHVVIENKGVEVPDFDKGNFIHLTESANDGTVRRYLVRQMKVDDIRWYFCNYCSKQFKKPSDLIRHMRVHTKEKPFKCEQCNAEFTLKTTLLSHVKTHTNKMDYTCKICNSSFISLRVLNAHLRKHDFESLPKWQCITCGYLFNQSEEGVEHREKMGRDKPHVVQPFRNTIMKQPLYQTTYGFLTFKPPKHPVPNTGSESPTLRPFHCAICDARFTKRINLKRHVLFHNSDRNFKCNLCPKTFITSYGLKEHLNYHNNVKNYACKQCDKKFVTATLLKRHVIIHNNHKPYQCPYCTKKFKTLLLCRIHINRVHMKEVIKKLNSESENLVVGLQPRAGQNNAGMVSVASEINVLQNLPHTADNENMTMLAPEGNNCIQIMNADGTLTDVNKYSTVFVNMNDLQFLDNSNLNLTSENTGSLLNPQENLQVNDIIFDIDLKPGLSLPPEEIFEASIEAEQVSNALPSAADVSTKLVKLDNFSEENTGANTSILNNSSDLYSNINFNSCLSLPITVGENDAILDANTSSTVLQQACAADMSHVDNIYESTNIMCINCSRMFTSFDTFQAHNCTLINNDTVQDKNEHESKELIPDGFDQNRELNLKETIEDKSFSNSKTRNVKSNITCNTCKTVMNSKAEYVKHLATAHKARRGSGTKSCKFCFKDFKKPSDLKRHLRTHTGERPFGCHMCGKTFSLKSTLESHIKTHDPAPKRYNCNVCSSFFSSKSSLKVHMMLHTGQKPYSCSFCDLKFRTVGNRKSHEVLMHLSKSRKSGQSKQTKVKNLLESVASGIISSLSEIQPNPDSCLEDNRDHVENTPTKLGIEEQDLSSQVLTTENLLSTLQDDSLPMDPVLLLQQLQMSGLVLTNEHNEPVSTLLLDDGTILNIDGMKDSIPELSLQPAEIQEPENMNINNNNVPVPAVAKPPEKVRNLECDICHKMYASRDVLRKHRKKVHGVNKKYPCIKCDRAYDTQDELGKHNKWHDGYRAFSCAYCTNSFMEESRLKVHMKRMHQHSNATKTTTSALLDVNFDLASENIDDPLLNNLFTFKKIV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-