Eads004834.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Exocentrus adspersus
Gene Symbol
-
Assembly
GCA_029955175.1
Location
JANEYG010000007.1:3118562-3123178[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 30 0.00044 0.03 15.5 3.2 1 23 135 157 135 157 0.98
2 30 2.3e-05 0.0016 19.5 2.0 1 23 163 185 163 185 0.98
3 30 2.5e-05 0.0017 19.4 5.8 1 23 190 212 190 212 0.99
4 30 0.012 0.85 10.9 0.6 3 23 220 241 219 241 0.96
5 30 0.0037 0.25 12.6 0.1 2 23 247 268 246 268 0.96
6 30 0.0068 0.47 11.7 3.7 1 23 278 300 278 300 0.97
7 30 1.2e-05 0.00083 20.4 0.7 1 23 306 328 306 328 0.99
8 30 4.6e-06 0.00031 21.7 0.6 1 23 334 356 334 356 0.98
9 30 7.2e-06 0.00049 21.1 2.9 1 21 362 382 362 384 0.95
10 30 4.3e-05 0.003 18.6 2.6 5 23 393 411 388 411 0.95
11 30 0.0012 0.081 14.1 5.9 1 23 461 483 461 483 0.98
12 30 0.00021 0.014 16.5 1.3 1 23 489 511 489 511 0.96
13 30 6e-05 0.0041 18.2 1.3 1 23 518 540 518 540 0.99
14 30 0.0012 0.083 14.1 1.9 3 23 548 569 547 569 0.96
15 30 0.0012 0.083 14.1 1.0 1 23 575 597 575 597 0.97
16 30 0.00027 0.018 16.2 0.6 2 23 608 630 607 630 0.96
17 30 6.7e-05 0.0046 18.1 0.3 1 23 636 659 636 659 0.94
18 30 6.2e-05 0.0042 18.2 4.1 1 23 665 687 665 687 0.98
19 30 2.4e-05 0.0016 19.5 5.8 1 23 693 715 693 715 0.99
20 30 0.00043 0.029 15.5 1.8 2 23 722 744 722 744 0.96
21 30 0.00016 0.011 16.9 1.6 2 23 760 781 759 781 0.96
22 30 2e-06 0.00014 22.9 1.1 1 23 787 809 787 809 0.97
23 30 0.0025 0.17 13.1 0.6 1 23 815 837 815 837 0.98
24 30 0.0015 0.1 13.8 0.8 2 23 844 866 844 866 0.95
25 30 0.00058 0.04 15.1 0.7 1 23 871 893 871 893 0.96
26 30 7.2e-05 0.0049 18.0 0.6 2 23 904 926 903 926 0.96
27 30 0.0018 0.12 13.6 3.1 1 23 933 955 933 955 0.97
28 30 1.4e-05 0.00097 20.2 1.2 2 23 962 983 961 983 0.98
29 30 5e-06 0.00034 21.6 0.3 1 23 989 1011 989 1011 0.97
30 30 0.0066 0.45 11.8 4.3 1 23 1017 1039 1017 1040 0.95

Sequence Information

Coding Sequence
ATGGAGCGttgcattttaaaatttagaagcCTGTATCACGACCAACTGTACTCGACGCAGTTCACGCTAGATTCCTTGAATCCCGCCAATCTACACATGCAGTGTAAATATTTGATGGACGTAGTGGATTATCAGAAACAAACTATACCTGATGATAACATACTAGGAAACTCTGTAGTGGATCAGCTGAATGAATCAGACACTGAACTACTAAACCTGCTGACAGCAGAAGAAGACTGTACCGCTATTTTGAATAACATAGCCACAAATGAACAATTCCAAAGACTAATAAGCAACGAAGCTGATTTCGTTCAAACAGAAGAAATGGAAGAGTTTATGAGCAACAACTGTGAACTCCCACCTGCATCTGTGAACATCGAAGAGAAAACGACGAAGGAAGGCTTTAAGTGCGACCAGTGTCAAAGAATCTGCGCTACAAAGAAACTACTAAAGAAACATTTGCTGATACATACCCAAGAACGCACTTTCCCTTGCGAGACTTGTGGGAAATTATTCCGGCACAAATACGAGGTTACTGCTCATCAGAGGAGCCACAACAAACCTACGTTCCAATGCGATATATGTTCCAGAATGTTTATACACAAGTCACACCTCAATGTCCATCGTAAAAAACATTTGGGGGAGTACACAGCATTTTGCGAGGAGTGCCAAATTGGCTTCGTTACTTTAACTTCATTCAAAACTCATAGGAACGTCTACCATGACAACTTACAACTCATTTGCGATAACTGCGGCGCCGCTTTAAGCAGTCTTTCTTCCTTGAAGGAACATAAACTTACTCACGATCCGAATTACGGCAAGGAAAGGTCTCACGTCTGCGACATATGTGGGAAAAGTTATTTGACTTCGAGGAACTTGAGATGCCACATGAAAATCCATTCCAAAATCTGCGCGTACAAATGTAACATCTGCGGCAAGTCGGTCAGCAGTAAAAGTATCTTAGAAACACACCAGAAGATGCACACCGGCGTTAAGGACTTCAACTGTGAGATTTGCGATAAAAATTTCGCTTCCAAGGAATACCTCACGGTTCACAAACGCATCCACAGCGGGGACAAACCGTTCGAGTGCACCGTTTGTGGTAAACGTTTCACGCAGAAGACGTCGCTGACTGTCCATATAAGGTGCCATACCGGACAGAAGCCTTATAAATGTGAATGCGGGAAGGAGTTCACCACTAAGAGCCATCTAATGACGCACTACAAGACTCATGACATCGGCGGAGTTGATATAGATGTGGAAAAAAGTTCCCCAAAAAAGAAACAGCTCGCTAGTCACATCCTGAATAAGCACGACGACACGAACCCTTTCCAaTCAGAGGATAACTTTTCCGTAAAAGACGAAGATGGGAAGCAGGCCTATAAGTGCGCCACCTGTCTCAAGACATTCAGCAGCAAGCATTACTTCAAAAGCCACCAGCTTAGCCACACGGACATTAAACCTTTCAAATGTATAGACTGCGGCAAGAATTTCAAGAGAAAACAGGAACTCACCAGTCACAGCCTAGTCCACAACAGCAACAGGAAGATCTTCCAATGTGAGGTCTGCAAAAAAACCATGACTACAAAATCAGGCTTAATCCTGCACCAGAGAAGGCACCTGAAGCTGTATAACGTGTTCTGCGACTATTGCAAGAAGGGTTTTTACTCCAAAACTACCCTCACGTTACACGTCAACTCCAAGCATACCGGCAAGTCCACGTTCATTTGCGAAATATGCGGCCGGCCTTGCTACGACAAGACCAGTTTAGACAATCACAGAGCAAAGCACGACATCAGCTACGGCAAGCTGAAGAACATCAAATGCGAACTCTGTGATACGAAATTCATCGATAAGAAGTACCTGCTGGTGCACATGTATAAACTCCACGGCAATGGCAACCGATTCGTGTGCGACATATGCGGAAAGAAACTGTGCTCCAAAGTTAGTCTGCAAGAACATATGATAGCCGTGCACGAAGGTCTTAAACCTCACAAGTGCAAAATGTGCGATCAGAGCTTCGCAAACAAAACAACTTTAAGACTCCACGAGAGGCGACATACAGGAGTCCGCCCTTACAAATGCACCCACTGTGAAAGAGCTTTCACGCAGAGCCACAGCCTAAAAATGCACTTGAGACTGCATACCGGTGAGAAGCCCGAGGTGTGCACCTTGTGTAACACCAACTTTGTTTCGAAAAACATGCTGAGATCTCATATGAAAAGTAAACATAAAGTGTATGATCTGCCAATgGTGAATGACGAATCGTCCAAACTGACGTGTTTATACTGCGATAAAGTTTTCAAGGAGAAACGTAGACTCAACAAGCACCTTTTATCGCACAGCACTGAGAGACCCTTCGCGTGCAACCTGTGCGACAAACGCTTTAAGAGGAAGTACGACATCAACATTCACATGCGGGTGCACGGGGATCACCCGACGTTCGAGTGCGACATCTGTTTGAAGACGCTCAAATCGAAAGGGGCGTTTGTGATCCACAGAAAGAGACACTTGAAACAATACGTCGCCAAATGCGAAATTTGCGGCAGGGGATTCGTCACCAATCAAGAGTACCACAACCACGTGGCTTCCAAACACGGTACCAGCAACCACATCTGCAGCATATGTGGCAGGGGTTGTTACGACAAGGCCGCTCTTCAAGGTCACATGGCACGCCACGAAGAAGACTACGGAGTGAACAAGAACATCAAGTGTGACATTTGCGAGAAAACATTCTTCCAAGAGAAATACCTAAAGCAACACATTATCAGGATCCACAAAGACGGAGGACAACGATTCATGTGCCATTTCTGCGGAAAGAACCTACATTCCAAAGGCAGTTTGAGGGACCACATATTGATCCACAAGGGACTGAAGCCGATACAATGCACGGAGTGCGGCAAAAGCTTTGCTCTCAGAACCACTCTAAAGCTACATAAAAGGACCCACACGGGAGAGAGGCCGTACAGTTGTAATGTTTGCGGGAAGGCGTTCACCCAGAAGGGACCTTTGAATACGCATTTGTTGTACCACACCGGAGAAAGGCCTCACAAATGTGAAATCTGTTCCATGGGATTTGTGACCAAGACGCTGTTAATGAGCCATAACAAGAAACATCACGACTTGATGTAA
Protein Sequence
MERCILKFRSLYHDQLYSTQFTLDSLNPANLHMQCKYLMDVVDYQKQTIPDDNILGNSVVDQLNESDTELLNLLTAEEDCTAILNNIATNEQFQRLISNEADFVQTEEMEEFMSNNCELPPASVNIEEKTTKEGFKCDQCQRICATKKLLKKHLLIHTQERTFPCETCGKLFRHKYEVTAHQRSHNKPTFQCDICSRMFIHKSHLNVHRKKHLGEYTAFCEECQIGFVTLTSFKTHRNVYHDNLQLICDNCGAALSSLSSLKEHKLTHDPNYGKERSHVCDICGKSYLTSRNLRCHMKIHSKICAYKCNICGKSVSSKSILETHQKMHTGVKDFNCEICDKNFASKEYLTVHKRIHSGDKPFECTVCGKRFTQKTSLTVHIRCHTGQKPYKCECGKEFTTKSHLMTHYKTHDIGGVDIDVEKSSPKKKQLASHILNKHDDTNPFQSEDNFSVKDEDGKQAYKCATCLKTFSSKHYFKSHQLSHTDIKPFKCIDCGKNFKRKQELTSHSLVHNSNRKIFQCEVCKKTMTTKSGLILHQRRHLKLYNVFCDYCKKGFYSKTTLTLHVNSKHTGKSTFICEICGRPCYDKTSLDNHRAKHDISYGKLKNIKCELCDTKFIDKKYLLVHMYKLHGNGNRFVCDICGKKLCSKVSLQEHMIAVHEGLKPHKCKMCDQSFANKTTLRLHERRHTGVRPYKCTHCERAFTQSHSLKMHLRLHTGEKPEVCTLCNTNFVSKNMLRSHMKSKHKVYDLPMVNDESSKLTCLYCDKVFKEKRRLNKHLLSHSTERPFACNLCDKRFKRKYDINIHMRVHGDHPTFECDICLKTLKSKGAFVIHRKRHLKQYVAKCEICGRGFVTNQEYHNHVASKHGTSNHICSICGRGCYDKAALQGHMARHEEDYGVNKNIKCDICEKTFFQEKYLKQHIIRIHKDGGQRFMCHFCGKNLHSKGSLRDHILIHKGLKPIQCTECGKSFALRTTLKLHKRTHTGERPYSCNVCGKAFTQKGPLNTHLLYHTGERPHKCEICSMGFVTKTLLMSHNKKHHDLM

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-