Eads004835.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Exocentrus adspersus
Gene Symbol
-
Assembly
GCA_029955175.1
Location
JANEYG010000007.1:3123691-3130002[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 46 0.00012 0.0081 17.3 0.2 2 23 4 25 4 25 0.95
2 46 1.1e-05 0.00077 20.5 4.6 1 23 31 53 31 53 0.98
3 46 0.0038 0.26 12.5 1.3 1 23 59 81 59 81 0.98
4 46 0.081 5.5 8.4 0.4 2 23 88 110 88 110 0.90
5 46 1.2e-05 0.0008 20.4 1.6 1 23 115 137 115 137 0.98
6 46 0.051 3.5 9.0 2.4 1 23 146 169 146 169 0.94
7 46 0.00014 0.0096 17.0 0.7 1 23 176 198 176 198 0.98
8 46 1.2e-05 0.00085 20.4 0.8 2 23 205 226 204 226 0.98
9 46 4.7e-07 3.2e-05 24.8 0.5 1 23 232 254 232 254 0.98
10 46 9.4 6.4e+02 1.9 2.4 1 14 260 273 260 276 0.88
11 46 2.1e-05 0.0014 19.7 0.8 2 23 291 312 291 312 0.97
12 46 1.6e-06 0.00011 23.2 0.6 1 23 318 340 318 340 0.98
13 46 0.0046 0.31 12.3 1.6 1 23 346 368 346 368 0.98
14 46 0.002 0.14 13.4 0.3 2 23 375 397 375 397 0.95
15 46 0.0015 0.1 13.8 1.6 1 23 402 424 402 424 0.96
16 46 0.0023 0.16 13.2 0.4 2 23 435 457 434 457 0.95
17 46 0.00023 0.015 16.4 0.6 1 23 464 486 464 486 0.97
18 46 5.1e-06 0.00034 21.6 0.9 2 23 493 514 492 514 0.97
19 46 3.4e-05 0.0023 19.0 1.9 1 23 520 542 520 542 0.97
20 46 0.013 0.87 10.9 3.8 1 23 548 570 548 571 0.95
21 46 0.00083 0.056 14.6 2.7 1 23 590 612 590 612 0.94
22 46 0.00039 0.026 15.7 0.7 1 23 618 640 618 640 0.97
23 46 0.022 1.5 10.1 1.5 1 23 646 668 646 668 0.99
24 46 0.0018 0.12 13.6 0.3 2 23 675 697 675 697 0.94
25 46 0.00073 0.05 14.8 4.5 1 23 702 724 702 724 0.97
26 46 0.11 7.3 8.0 2.3 2 23 735 757 734 757 0.93
27 46 9.7e-05 0.0066 17.5 1.6 1 23 764 786 764 786 0.98
28 46 6.1e-06 0.00041 21.3 1.8 2 23 793 814 792 814 0.97
29 46 1.3e-05 0.00089 20.3 6.2 1 21 820 840 820 842 0.96
30 46 2.4 1.7e+02 3.7 0.4 1 17 848 864 848 865 0.91
31 46 1.1 73 4.8 4.4 1 20 938 957 938 960 0.95
32 46 0.094 6.4 8.1 0.3 1 23 967 989 967 989 0.95
33 46 0.00062 0.042 15.0 2.3 1 23 995 1018 995 1018 0.97
34 46 0.0027 0.18 13.0 0.4 1 23 1028 1051 1028 1051 0.96
35 46 0.0068 0.46 11.7 0.7 3 23 1061 1081 1060 1081 0.98
36 46 0.0021 0.14 13.4 1.0 1 23 1087 1109 1087 1109 0.97
37 46 1.9e-06 0.00013 22.9 0.9 1 23 1115 1137 1115 1137 0.98
38 46 0.2 14 7.1 0.6 2 23 1252 1273 1251 1273 0.91
39 46 0.14 9.5 7.6 3.3 1 23 1279 1301 1279 1301 0.98
40 46 0.0019 0.13 13.5 1.3 1 23 1307 1329 1307 1329 0.91
41 46 0.00025 0.017 16.2 3.6 1 23 1335 1358 1335 1358 0.98
42 46 0.0011 0.077 14.2 3.3 1 23 1370 1393 1370 1393 0.93
43 46 0.011 0.76 11.1 1.3 3 23 1404 1424 1403 1424 0.98
44 46 1.9e-06 0.00013 22.9 1.2 1 23 1430 1452 1430 1452 0.98
45 46 1.6e-06 0.00011 23.2 0.8 1 23 1458 1480 1458 1480 0.98
46 46 0.006 0.41 11.9 0.0 1 22 1486 1507 1486 1507 0.96

Sequence Information

Coding Sequence
ATGCACAACGTTTGTGCGACTTGTGGGAAAGTTTTTGCTTACGCCAAAAGTCTTAAGAAGCATCTCGTCTCTCACGGCGAAGAGAGGCCCTTTCCTTGCCACCtctgcaataaaaaattcaagaggCGGTACCAACTCTCTACCCACATTAAGGTACACGACGGTTCCTTGTCCTTCGAGTGCGATTTGTGTTTGAAAAAACTGCGTTCTAGAAGCTCCTTGATAACTCACAGAAAGCTACACCTCAAAGATTACGTTGCCAGGTGTGAGTTGTGTAACCAAGGCTTCTACACGATTCAACAGTACACTAACCACATGGGCGCCAAGCATACAAGCAGCAGCTTCGTCTGCAATATTTGCGGTAGATCGTGCTACGACAAAGCCTCTTTGCAAGGTCACATGAAGCGTCACTCCAAAGATTACGGCAGTGTTAAATTCCAATGTGAATTATGCGATAAGGAATTCCTACAGGAGCGGTATTTGAAGCAACACCACGTGCGAATGCACAAAAACGGAGGTCAGAGGTACGTTTGTGACCACTGCGGGAAGAAAGTAGGATCAAAGACAAGTTTGCGAGACCACCTACTCATCCATAAGGGCTTGAAACCCATAAAATGCAAAGAGTGCGGTCGAGGCTTCGCCCTGAGAACAACACTGAAGTTGCACATGCGGACCCATACAGGAGAGAGGCCCTACAGCTGCGACGTATGCGGTAAGGCGTTCACCCAGAAAGGTCCCTTGAAGACTCACATGCGGTACCACACCGGCGAAAGACCTTACAAATGTGAGATTTGCCCTACCGGGTGCAAGAGTCGGAAAAAAAGACGGAGTCGTGTTAAGAAGGAAACTGAACATTCAAGAAAAGCAGAAACTTGCGATGTGTGTGGCAAGTCATTCACAGACACGAGGAAGCTGACGAGACACGTCATCTCACATAGTGAAGAAAGACCCTATTCCTGCAACCTGTGCGGCAAGCAATTCAAGAGGAAATATCAAGTAGCGGCGCACATTCGCGTGCATGACGGTAACATGTCCTTCGAATGCGATTTCTGCTCTAAGAAATTACGGTCCAAGGGCTCCTGGATGATCCACAGGAGGAGGCATTTGAAGGATTACGTTGCCAAGTGTGAGGTTTGCGGCCAGGGTTTCGTAACGAATCAAGAGTACAGCAACCACATGGGTTCCAAGCACAACACTAGCAACCACATTTGCAACATCTGCGGAAGAGGTTGTTACGACAAAGGTGTCTTAAAAAGTCACATGGCTCGTCACGCAGATAACTACGAGACTAATCAGAGTATCAAGTGCGATATTTGCGACAAAACCTTCCTTCAAGAAAAGTACCTTCGGCAACACGTCATAAGGATTCACAGGGATGGAGGGCAGAAGTACATGTGTGACTTTTGCGGGAAGAATCTGAACTCCAAAGGGAGTTTGAAGAACCATATATACATACACAAGGGAGTTAGGCCGGTAGAGTGCAAGGAATGCGGTAAGAATTTTGTTCTGAAGACCACCTTGAAGTTGCATATGAGAACTCATACCGGGGAGCGACCCTATAGTTGTAAAGTGTGCGGGAAATCGTTCACGCAAAGAGGCCCTTTGCATACTCACTTGCTGTATCATACCGGAGAGAGGCCACACAAGTGTGAAATCTGTTCCATGGGTTTCGTAACTAAAACGTTATTAGTGAGCCATAATAAGAAACACCACGACGTCATGTGTACGAAGAAACAAGGATCTAAGTCTAGGAGATCGAAATCAGTTCATTTTTGTACAGTTTGTGGAAAAGTCTTCACAGATGTCAGATGCCTGAGTCGTCATCTCGTCGTACACAGCGAGGAGAGGCCGTTTGCTTGTAACATCTGCCCTATGAAATTCAAGTTGAATCACCAACTATCAGCCCACGCTCGCGTGCACAACGAAAGCCTGTCTTACGAGTGTGATTTCTGTTTGAAAAAACTACGGTCGAAGGGTTCCTGGGTCACCCACCGACGCAGACATACGAAAGACTTCATTGCTAGGTGTGAAATTTGCGACCAAGGTTTCGTCACCAGTCAGGAATATACCAGGCATGTGGACTCCAAGCATGGAATGAGCAGTCACACATGCACCATCTGCAGACGAGGTTTCTACAACAAACACGGTCTCCAAAGTCACATGGCTCGCCACGCTACCGGTTACAGCACCAACGAACACATTCGCTGCGAACTGTGCAACAAGACCTTCCTCCaagcgaagtacctgaaagatCATTTCCATAGAGTACATAAAGACGGCGGACAGAGATTCGTATGCCATCATTGCGGTAAGGAGGTGAACTCCAGAGGCAGTTTACGCGACCATCTGCTGATCCACGAAGGGCGTAAGCCGCTCCAGTGTATGGAATGCGGCAGGTGTTTTGTACAGAAGGGTACGTTGGACCAGCATATGAGGACGCATACGGGAGAGCGGCCCTACGAGTGTAAAGAATGCGGGAAGTGCTTTACCCAGAAGACTGCACTCACTAGACACTTACGGTGTCACACCGGGGAAAGGCCTTACGAGTGCCCCGTGTGCTGCAAAGGATTCATCAGCAAGGCAGCGTTgtcCAAAAACTATCGTCAAAAACGGGCCTTAACAGATCCTGAATGTGTTAttccaaaaccaaaaaaagaacCCAAAGAGGAATTAACCGATTCCGAAGAAGAGTACCCTGAAGATACTTTAGAGAACAATTTGCTCAAATTTGCTTGTGAACTCTGCGAAGAACAGATTCAAACAAGTATTGATTTCGCCATACACTCCATCAAGCATTCCCCAGATAACAAGTACTACTGCCACCATTGCCAATATAAAACGACTACGGCCAAGCGTATACGGAACCACATGTGGTTGCACGGCAAcaacagaaaatttttcaaatgtgAAACGTGCACTACCGTTTTCCCCGAATGGGCCCAAGCTATGGATCACAAAAACTTCCACTCGGGTGAGATGCCGTACGAATGTGAAACTTGTGGCAAGCATTTCATGTATTCCTGGTTGTTATTCACCCATCGCCGTTTACTTCACTGGGAAAGTACTGGAGGTACCGGCCCTTTCATGTGCGCAGTCTGCAGTGGGTCGTTTGGCACACGGTCCGGTTTACGGAAACACATCAGCAGGAAACACAGCAACAACCCTAAAGAGGTTACACTCTGCGATATTTGCGGAAAGAGTTTGGCTAACAACGAAACGTTGAAATTCCACAAGAGGACGCATACCGGGTACAAACCCCACGTGTGTAGTACTTGCGGTAAGAGCTTTTTGAAGAAAGGGTTGCTTATGGAACACGAGAGGGTCCACACCGGCGAGAGGCCCTTCATCTGTAAATACTGCCAGAAGGGGTTTTCACAGAGGGCACCCCTGAAAATTCACATGAGGACTCATACAGGAGAAAGGCCgtttTTCAACTCCTCCATCCTAAACAATCTCATATATGGCCCAGGAATATCTATAACACCCATCAAACAGGAAAGTAGCAACTGCCCTGCCACCGAATCCAATAAACCAGCTCCTTTTAACGGGTACAACGGTTATAACCCGTTCATTAACCAGTTTCTGGAACTTGACGCCAAGTTTCAACTTCCAAACGCAGAGATGGAAATAAAACCTGAAGCAGATTCTGGCAATATTCTAGACTGTTTAGATAAAGCTAATAAAGTGAAAAAGAAACCAAAGAACAGTTCGGATAGGAGTGCTCCTCAACCCCCTACTATTGACGAACCGATACATTGCGAAACTTGTAACGAAACTTATAAGAACAATGTAGCTTTCGCTTTGCATTCGATTCAACACGCACAAGATGAGAAATACGAGTGCCACTTATGCGATTATAGGAACTCGTCCAAATACCACATCGAAATGCATATCAGAGCCCACGAAGGCACCACCAAATACAAATGCGAGATCTGCGGTAAAGCCTTCACTGTAAGCACCCACGCCATAgaacataaatatttccatacGGGAGAAAAACCTTTCCAATGTGAAATTTGCGGGAAACACTTCATGTTTTCCTGGTTCTTAACCTCGCATCGCAGAACGCAGCACTGGGAAATAATGACTGGAAGCCCACTAGTGAAATACGACTGTACTATCTGTAACAAGCACTACACTTCTTCTACCGGCCTAAAAAGGCACAACCTCAGCAAACACAACTCTTCGGGAATAGACCCCTCCGTACTATGTGACATATGCGGAAAAAGACTTTCCAGTAAAGAGAAACTAAAGTTCCACAGAAGGATACATACAGGTTACAAACCCTTCTCCTGCGAGGTGTGCACTAAAAGTTTCTCTAGGAAAGAACAATTGAAGGAGCACGAAAGAGTGCACACGGGAGAGAAGCCGTTCATATGCAAATACTGCGGGAAAGGGTTCACTCAGAGGTCTCCTCTTAGGATACACGAGAGGACTCACACCGGGGAAAGACCGTACGTGTGCATGATTTGCGGCAAAGGGTTTATTTCCAAGGGGGTGATGGATACGCACATGAAGACTTGTTCAGCGGCGCAGATACCTTATATTTAA
Protein Sequence
MHNVCATCGKVFAYAKSLKKHLVSHGEERPFPCHLCNKKFKRRYQLSTHIKVHDGSLSFECDLCLKKLRSRSSLITHRKLHLKDYVARCELCNQGFYTIQQYTNHMGAKHTSSSFVCNICGRSCYDKASLQGHMKRHSKDYGSVKFQCELCDKEFLQERYLKQHHVRMHKNGGQRYVCDHCGKKVGSKTSLRDHLLIHKGLKPIKCKECGRGFALRTTLKLHMRTHTGERPYSCDVCGKAFTQKGPLKTHMRYHTGERPYKCEICPTGCKSRKKRRSRVKKETEHSRKAETCDVCGKSFTDTRKLTRHVISHSEERPYSCNLCGKQFKRKYQVAAHIRVHDGNMSFECDFCSKKLRSKGSWMIHRRRHLKDYVAKCEVCGQGFVTNQEYSNHMGSKHNTSNHICNICGRGCYDKGVLKSHMARHADNYETNQSIKCDICDKTFLQEKYLRQHVIRIHRDGGQKYMCDFCGKNLNSKGSLKNHIYIHKGVRPVECKECGKNFVLKTTLKLHMRTHTGERPYSCKVCGKSFTQRGPLHTHLLYHTGERPHKCEICSMGFVTKTLLVSHNKKHHDVMCTKKQGSKSRRSKSVHFCTVCGKVFTDVRCLSRHLVVHSEERPFACNICPMKFKLNHQLSAHARVHNESLSYECDFCLKKLRSKGSWVTHRRRHTKDFIARCEICDQGFVTSQEYTRHVDSKHGMSSHTCTICRRGFYNKHGLQSHMARHATGYSTNEHIRCELCNKTFLQAKYLKDHFHRVHKDGGQRFVCHHCGKEVNSRGSLRDHLLIHEGRKPLQCMECGRCFVQKGTLDQHMRTHTGERPYECKECGKCFTQKTALTRHLRCHTGERPYECPVCCKGFISKAALSKNYRQKRALTDPECVIPKPKKEPKEELTDSEEEYPEDTLENNLLKFACELCEEQIQTSIDFAIHSIKHSPDNKYYCHHCQYKTTTAKRIRNHMWLHGNNRKFFKCETCTTVFPEWAQAMDHKNFHSGEMPYECETCGKHFMYSWLLFTHRRLLHWESTGGTGPFMCAVCSGSFGTRSGLRKHISRKHSNNPKEVTLCDICGKSLANNETLKFHKRTHTGYKPHVCSTCGKSFLKKGLLMEHERVHTGERPFICKYCQKGFSQRAPLKIHMRTHTGERPFFNSSILNNLIYGPGISITPIKQESSNCPATESNKPAPFNGYNGYNPFINQFLELDAKFQLPNAEMEIKPEADSGNILDCLDKANKVKKKPKNSSDRSAPQPPTIDEPIHCETCNETYKNNVAFALHSIQHAQDEKYECHLCDYRNSSKYHIEMHIRAHEGTTKYKCEICGKAFTVSTHAIEHKYFHTGEKPFQCEICGKHFMFSWFLTSHRRTQHWEIMTGSPLVKYDCTICNKHYTSSTGLKRHNLSKHNSSGIDPSVLCDICGKRLSSKEKLKFHRRIHTGYKPFSCEVCTKSFSRKEQLKEHERVHTGEKPFICKYCGKGFTQRSPLRIHERTHTGERPYVCMICGKGFISKGVMDTHMKTCSAAQIPYI

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-