Basic Information

Gene Symbol
Cdc5l
Assembly
GCA_029955175.1
Location
JANEYG010000008.1:2245495-2248422[+]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 1.2e-16 2e-13 50.9 1.5 2 46 9 54 8 54 0.97
2 2 2.5e-12 4.1e-09 37.1 0.1 1 45 60 103 60 104 0.93

Sequence Information

Coding Sequence
ATGCCTCGTATTATGATCAAAGGAGGTGTCTGGAGAAACACCGAGGATGAGATCTTGAAGGCGGCTGTTATGAAATATGGGAAAAATCAATGGTCCCGTATCGCATCCCTGTTACACAGAAAGTCGGCTAAGCAGTGCAAGGCACGTTGGTTCGAATGGTTGGATCCTAGCATAAAGAAAACTGAGTGGTCTCGTGAGGAAGACGAAAAACTCTTGCATTTAGCAAAACTCATGCCGACGCAATGGAGAACCATTTCTCCTATGATAGGACGAACAGCCGCTCAGTGTTTGGAACGCTATGAATATTTACTCGATCAAGCTCAGAAAAAAGAAGAGGGTGAAGATGGAATTGATGACCCACGTAAACTTAAGCCTGGAGAAATCGATCCTAATCCCGAAACAAAACCTGCCAGACCGGACCCAAAGGATATGGATGAAGATGAATTGGAAATGTTATCTGAAGCTAGAGCAAGGCTGGCGAATACACAAGGGAAGAAAGCGAAACGAAAAGCACGCGAAAAGCAGTTGGAAGAAGCTAGGAGATTAGCTGCTTTGCAAAAAAGAAGGGAATTGAGAGCTGCGGGAATTGAAGTAAATTCACGCAGGAAGAAGAAGCGCGGTGTAGACTACAATGCGGAAATTCCATTTGAGAAACGCCCTGCCATCGGTTTTTATGACACTTCTAACGAGGTTTTAGATCCAGTGGCACCGGATTTCTCCAAAATGAGGCAGCAGCACTTGGATGGGGAATTGAGAAGCGAACAAGAAGAAAGGGAGCGTAGGAAGGATAAACAGAAATTGAAACAGCGCAAGGAGAATGACATTCCTCAGGCCATGTTACAAAACCTTGAGCCGCCAAAGAAAAGGTCAAAGCTTGTTTTGCCAGAGCCACAGATTTCCGATCAGGAAATGCATCAAGTTGTAAAATTGGGAAGAGCCAGTGAAGTGGCACGAGAAATAGCAGCTGAAAGTGGCGTTGAGACAACAGACACGTTGCTGAATGATTATACTGTTACTCCACAAGTTGCTGCAACCCCCAGAACTCCAGCACCACAAACAGACAGaattcttcAAGAGGCCCAAAATGTGATGGCTCTCACTCACGTAGACACCCCTCTGAAAGGGGGTTTAAACACTCCACTTCACAACTCTGATTTCTCTGGAGTTGTGCCCCAGGCTCAATCCATTGCTACACCAAACACTGTTTTAGCTACCCCCTTCCGTTCAACAAGAAGTGATGGAAGTGCTACCCCAGGAAGTAGTGTTGGCTTCATGACACCCCGATCGGGTGCTGTGGTACCTGCTGGTGCACAGAGCGGCAACGTAACACCCTCTGTGAGGGACAAGTTGAACATAAATACGGAAGACGGCATTGAAGTTGGAAATACACCCGCTGCACAAAGAATGTATCATAATTCAATAAAAGAGCAGTTGAAAATGGGGCTCAGTACTTTACCACAGCCGAAAAATGACTATGAGATAGTTGTGCCTGAGCATGAAGAGGAAGAGGTACCAGAACAGGCTCAAGAACAGATGatcgAAGATCAGGCCGACGTTGATAAAAGGCGCGAAGAAGAACTTAAAGCAAAAGCTGCAAGAGAATTAGCGAGTCGGTCTCAAGTGATCCAACGGTCATTGCCGCGGCCAGCAGATGTTAACATGACAGTTTTACGCCCACCTCAAGATAGCTATTCCCTTACCGATCTCCAGAGAGCAGAGGAGCTAATTAAACGAGAAATGGTTACAATGCTATGTTttgataatttgaaaaatccgGTTCCTACTCAGAGCAAGCGTTCAAACATGTCACAAGCTCAGCAACTAGCGTATTTAGAGCAACATCCGTACGAGAATTTCAGTAGCAATGATTTAGAGGAGTCTAGAGCAGCACTGAAAAGAGAGATGGAGATTGTGAAAAACGGCATGAATCACGGAGAACTGCCTATCGAAGCTTACACACAAGTATGGGAAGAGTGTCTTAGGGAAGTGTTGTTCTTACCCAACCAAAATCGGTACACGAGGGCGAATCTAGCAAGCAAAAAAGATCGGCTCGAATCTGCTGAGAGGGTTTTGGAACAGAACAGGTCGCACATGGCAAAAGAAGCAAAGAGAGCCGCTAAAATGGAGaagaaactgaaaatattgaCTGGCGGTTATCAATCTCGCGCTCAAGCGCTTATCAAACGGTTACAAGATATGTATGAAAATATAGATCAAACCAACTTGGAATTGaatacttttaaattgttgCAAAAACAGGAAGCAGCTGCTTTGTCTAGAAGAGTTCAGtcaCTTAGCGAGGATGTTGCCAGACAgatggaaagagaaaaagcgttacagaaaaaaatatgcggATTATCAGAATGA
Protein Sequence
MPRIMIKGGVWRNTEDEILKAAVMKYGKNQWSRIASLLHRKSAKQCKARWFEWLDPSIKKTEWSREEDEKLLHLAKLMPTQWRTISPMIGRTAAQCLERYEYLLDQAQKKEEGEDGIDDPRKLKPGEIDPNPETKPARPDPKDMDEDELEMLSEARARLANTQGKKAKRKAREKQLEEARRLAALQKRRELRAAGIEVNSRRKKKRGVDYNAEIPFEKRPAIGFYDTSNEVLDPVAPDFSKMRQQHLDGELRSEQEERERRKDKQKLKQRKENDIPQAMLQNLEPPKKRSKLVLPEPQISDQEMHQVVKLGRASEVAREIAAESGVETTDTLLNDYTVTPQVAATPRTPAPQTDRILQEAQNVMALTHVDTPLKGGLNTPLHNSDFSGVVPQAQSIATPNTVLATPFRSTRSDGSATPGSSVGFMTPRSGAVVPAGAQSGNVTPSVRDKLNINTEDGIEVGNTPAAQRMYHNSIKEQLKMGLSTLPQPKNDYEIVVPEHEEEEVPEQAQEQMIEDQADVDKRREEELKAKAARELASRSQVIQRSLPRPADVNMTVLRPPQDSYSLTDLQRAEELIKREMVTMLCFDNLKNPVPTQSKRSNMSQAQQLAYLEQHPYENFSSNDLEESRAALKREMEIVKNGMNHGELPIEAYTQVWEECLREVLFLPNQNRYTRANLASKKDRLESAERVLEQNRSHMAKEAKRAAKMEKKLKILTGGYQSRAQALIKRLQDMYENIDQTNLELNTFKLLQKQEAAALSRRVQSLSEDVARQMEREKALQKKICGLSE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2