Basic Information

Gene Symbol
-
Assembly
GCA_029955175.1
Location
JANEYG010000002.1:5115403-5118506[-]

Transcription Factor Domain

TF Family
MYB
Domain
Myb_DNA-binding domain
PFAM
PF00249
TF Group
Helix-turn-helix
Description
This family contains the DNA binding domains from Myb proteins, as well as the SANT domain family [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 7 0.18 2.9e+02 2.4 0.0 3 18 189 204 188 225 0.75
2 7 0.16 2.6e+02 2.5 0.0 22 45 256 281 253 282 0.84
3 7 4.6e-11 7.7e-08 33.1 0.2 1 35 288 324 288 327 0.96
4 7 4.2e-11 7e-08 33.2 0.0 1 46 341 390 341 390 0.98
5 7 1.8e-10 3e-07 31.2 0.0 1 46 397 442 397 442 0.96
6 7 0.01 17 6.3 0.7 30 45 446 461 443 462 0.86
7 7 3.8 6.4e+03 -1.9 0.0 25 36 734 746 733 747 0.72

Sequence Information

Coding Sequence
ATGGAAGACGAGGAGGACCTCAAGAGGATGATAGCGCTCATAAACACAACCAAGGAGATGATGAAGGAGGATGCACCAGATTACCACTACGATGATTTCATCATCTGCGAAAACAGCGACGGAGACGAGaacGGGGACTACGCCTATATCGAAGACAATTTCGAGTTCTGCAACTTCAAGAGCAGCACGGATCTTTCTAAACTGAACTCCTACGAATCTAGATCTAGCTTGAAACCTGACGAATTGCAAGTGATAGACTCGTGTTCCGATTCGGACTTGCGGAAGCTGCTGCTGCTAAACCGAACCAAGAACTTCCAACTGATGCAAATGTACAAGAAACTGAAAGACTTGTTGATACAGTGCCAGAAAGATATTGTCGACAAGAACGAGCTGTTGACAAACTTCATGAAACAGAACGTGGGAAAGCAGCCGTCCAGCGGGGCGTGGCGTTTAGCGGCGCCCTATTTCAAAGACAAGCAACTGTACAGTTGCCCTCCCAACGCGGATGCTGTTCGAAAGAAGAAAAACAACGAATTGTGCGTGTACGACATCACGTATATTCCGAGGTGGACGAATCTGGAATGCGAAAAGTTGCAACGAGCCGTGAAGCTCAACTATAACATTAACCAACAGAACGAAGTTATGAAAAAGATGAAGAACTTGGAGACAAACGATAATGAAATGAAAGCTTTGCAAGCGAGGATGGAGGAGTTACAGAAGGAAGACAACTGCGTAACACCCCCTTTGAACTCGGACCAGTTTATCGATTGGATGAGAGTGGCAGAAGTATTTCTTCAAgATCGAAGAACATCATTTGAGTGTACTTCCTTCTGGCATATTTACCTGCACCCGTCCATCAATAAGACACCGTGGACACCTGAGGAGATCGAAAAGCTGAAAAAGCTCGCTGTGAAGCACCGGCTTCAGAACTGGGATGATATCGCAAGGGAACTAGGAAGCAACCGTACCGGTTTCATGGCTTGTATGAAATACCACACCAATCTGCATGAACGGGTCAGGAAAGGCGACTTCACCCACGCCGAAGATATGATGATAACGCAACTAGTGCAGAAGCATAAAATGGGCGACTACATTCCCTGGTTCAAGATCGCGCAGCACTTCAAAGACAGGACGAGGAGTCAGCTGCACCATCGCTACACCTACTACCTTAGCCAGACGGGTAAACGCAAAGGTAAATTTACCGACGAGGAAGATATACTACTGATGATACTCGTCGACCGGTTCGGAAGGAACTACAAGAAATGCTCCGAGTATTTACCCACCAGGTCACTGGTCCAGCTCCGGTCGCGGTACAGCACCAACCTGCAAgggaagataaaaaaaagGTGCCGGAACCAAATCAGGCAGAGGTACCACACCATAAAAGCCTACATGGAGAAAAACCCCGCGTCTACTTTGGCCACGGTGCCCAGGAGGAAGCACAAACTCCAAGCCGAGGAAGACGCTTTCAATTTTCTAAGaatgATAGCAGATCAGTTTCGAGACTCTGAAGAGATCCCCACGCTGCAAGAGATAGGGAAAGCGTTGCGGCAGCAGGGCTATGAAAGCAATCAGCCTTTAGAACTTCCGAATGCGTTCGAAGTTAAATTCCCTAACAAGTTCAACGTCGACGAGATGTTAACCAATTTCTTTTCCGACTCCTTCAAGATGACGTCGTCCAAGTGCATCACGCCGCACTACGTCCAGAAAGCCGTCACAGACGTTCGTACGGTGCTGGACGTTTTGCAAGTAAAGTTAGACATACCTGAGGATTTCGAACACGACAACAGGTTGGACAACTTGGACGTGGCGGTTTTAAACGCCCTGTCAACTGAGAGGGAAGGCAACGAGGATGTAAACAATCTATTAGCGCCGAATCTGAATACTGTCCTCGGTCTTAGGAACCTTTTGATAAAGTTCTCCAGCAACAACCTGGAATACCAGGAAACGAATAAGGATCACGTTAACGAAGCGTGGTCCAATATCGTTAGGCAATTACTGAATCTATCGGACAGGGAACGGGATGTGATCGAGAAGCATTACCACCTGTTTTTCAAACGCTTCCAAACTCTTTTCAAATGGCCAGCGGTGATGACCCTAGTCAATCCCTCCGCCGAGCTGCACAGCACTTGCAACAACGAATTAACAGTCAACAAGATCCAGGTGAAACGAACGTACAGCAAAGCGGACAAGAACGAAACCATCGCAGAGGAAGTGCCTGGTAAGCGGATGAAGAACTCGGAAGCGGCCAGTTCCTCGACGGCGATAACTTTTCAACCTTTAAAACTAACCCCTGTGACCAATAAGAGCGTGATTGAAGACTTGCTGCGCAACAGAGACAAAAAGTTGTTTTGCCTGGAAGCCGTCCAAGGCGAGAAGGGAACCACAACTGTAATAAAGGAAGTGGATTTCCATTCTTACGTCGACAAGCAAGTCGAAAGTACCGCTAATGTAGAAGTCGCTTCGACACCCACCAAGAACCGGGCCACTCATTTTATACCCGGCCAAGGAGAGTGTATTATATTGAGGGGCGACGACGACGCTCTTTCGGGTATCAGCGATGAATCACTCGATGACGACGGCGTTGAAGAGGATGACGTTGATATAGTCAAGTTAGAGCAGATAATTCACGACCAAGTCGGCGAGGTTTCTCATGAAGtatTGGAAGATTTCGAGGATCTGAAGAAATTGGACGATTTTATAAAGACGCACAAAGGCCTTGATATGGATTTTGCGTGA
Protein Sequence
MEDEEDLKRMIALINTTKEMMKEDAPDYHYDDFIICENSDGDENGDYAYIEDNFEFCNFKSSTDLSKLNSYESRSSLKPDELQVIDSCSDSDLRKLLLLNRTKNFQLMQMYKKLKDLLIQCQKDIVDKNELLTNFMKQNVGKQPSSGAWRLAAPYFKDKQLYSCPPNADAVRKKKNNELCVYDITYIPRWTNLECEKLQRAVKLNYNINQQNEVMKKMKNLETNDNEMKALQARMEELQKEDNCVTPPLNSDQFIDWMRVAEVFLQDRRTSFECTSFWHIYLHPSINKTPWTPEEIEKLKKLAVKHRLQNWDDIARELGSNRTGFMACMKYHTNLHERVRKGDFTHAEDMMITQLVQKHKMGDYIPWFKIAQHFKDRTRSQLHHRYTYYLSQTGKRKGKFTDEEDILLMILVDRFGRNYKKCSEYLPTRSLVQLRSRYSTNLQGKIKKRCRNQIRQRYHTIKAYMEKNPASTLATVPRRKHKLQAEEDAFNFLRMIADQFRDSEEIPTLQEIGKALRQQGYESNQPLELPNAFEVKFPNKFNVDEMLTNFFSDSFKMTSSKCITPHYVQKAVTDVRTVLDVLQVKLDIPEDFEHDNRLDNLDVAVLNALSTEREGNEDVNNLLAPNLNTVLGLRNLLIKFSSNNLEYQETNKDHVNEAWSNIVRQLLNLSDRERDVIEKHYHLFFKRFQTLFKWPAVMTLVNPSAELHSTCNNELTVNKIQVKRTYSKADKNETIAEEVPGKRMKNSEAASSSTAITFQPLKLTPVTNKSVIEDLLRNRDKKLFCLEAVQGEKGTTTVIKEVDFHSYVDKQVESTANVEVASTPTKNRATHFIPGQGECIILRGDDDALSGISDESLDDDGVEEDDVDIVKLEQIIHDQVGEVSHEVLEDFEDLKKLDDFIKTHKGLDMDFA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-