Eads023553.1
Basic Information
- Insect
- Exocentrus adspersus
- Gene Symbol
- -
- Assembly
- GCA_029955175.1
- Location
- JANEYG010000234.1:140887-142662[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 6.8e-10 2.9e-07 30.8 0.0 1 39 18 57 18 60 0.92 2 2 6.6 2.8e+03 -1.2 0.0 27 36 342 352 342 353 0.83
Sequence Information
- Coding Sequence
- ATGCCCAGACAATACCACAGAATGCTTGGATCGAGAACCTATTCTGACTACAGCCCAGATATGCTTGCAGAATGTCTGAATCAGGTTAAAAATGGAGAAATTAGTCAGCGACAAGCTGCTGCTCAGTATAAAATCCCTAGGAAGACACTTTACagcaaactaaaaaataagcaTGCTTGCAAGCCTGGTCACCCTGCAATATTTTCAGAAGAGGAAACTGAGTTTGAGAAATGTATACTGTCGCTCAGTGATTATGGGTTTCGTGTGGATTCATTTGATTTGAGAATggtcataaaaaattatttaaatcaacaAGGGCGCAACATTCGTCAATTCGCAAATAACACCCCCGGAGAGGATTGGctgaaatcatttttaaaacgaCGAGCCACACTGTCTCTGCGATTCGCAGAGAGTATTAAACGAAATCGTGCAGCGGTTAATGAGGATACTTTAAGACAATTCATAGAAAATTTGTCTACAGAATTAGAAAATGTTCCATCGAAGAACATATGGAACTTCGACGAAACCAATTTAACCGATAACCCAGGACAAAAAAGAGTACTGACGAAAAGAGGATGTAAATATCCTAAGATACGCAATTCTTCAAAAACCTCTTTTTCATTAATGTTTTGTGGCAGCGCAGAAGGAGAGCTTTTACCATTGTACGTAGTGTACAAAGCTCAACACATGTGGTCCACTTGGACGGAGGGTGGTCCTAAGTATACACGATATGCTAGTACTCCAAGTAGATGGTTTGATGGAGCAGTATTTACAGACTGGTTCGAAGGGCAACTATTACCTCGGCTGAAGAAACTTGAGGGAAAGAAGGTTGTCCTTTGTGACAATCTTTCTTCACATATCACTGTAAAAACTCTTAAATTgtgcaaagaaaataatatttccttGATATGTTTGCCTGCTAATAGCACACATCTAACACAGCCATTAGATATTGCCTTCTTCAGGCTTTTAAAAATCGCCTGGAGAAAAATTTTGGCAAACTGGAAAGAAAGTGAGGAAGGTATCAGCTACACAGTTTTACAAAAACAGCATTTTCCACCATTACTAACTAAATTAATGCAGGCCATTGAACCAAATACAGTGGCAAATTTGAAGTCTGGTTTCAGAAAATGCGGAATTGTACCTATTAATGTCGAACTACTACAAAGACTTCCACAGGGCTGCAATCAAGAGGCTATTGAAAACTCATTCATAGCAAACTTGGATAACAGGAGGCAAGAAGTTACCAAGCCTCTAAGAAAGACAAGAAAGAGAATGAATATTATTGCCGGCAAAAGCATTTCTGCTGAAGACGTTTTTGGTAATGAAGAGgtagaaaataatatagagACACCACAAAATTCTACAAATAAAGACGACATCCTTTGCAACGATTCTTCAGGAGATGATGTCGAAACCGAGATGAAAGAAGCAAACGATGAGGCAGATTTTATAAATGTCTGCAACGAACTGGCATCAGGCATGAAATCTAAAGATCTCTTGCAGTTGCAACCAATAGTTCGCCAAGTGGAGAGGTACGTTGCCTTCACATATGAAGGCGAAATTTTTGCTGGccaaatagtttattttaatgatCAGGAGGTTACAATCAGTGCCAtgcaaaaatctttaaaatgcTGGAAATGGCCTGCAAAAGCCGATATAATGAGCTATCCGTGGGAAGACGTGAAAGGGGGTCTCGATGCCCCAAAGCAAATTTCAAAACGAGGTCTTTATGCCATCCCACAGCTTGCTGCATTTTGGGAGAAGTAA
- Protein Sequence
- MPRQYHRMLGSRTYSDYSPDMLAECLNQVKNGEISQRQAAAQYKIPRKTLYSKLKNKHACKPGHPAIFSEEETEFEKCILSLSDYGFRVDSFDLRMVIKNYLNQQGRNIRQFANNTPGEDWLKSFLKRRATLSLRFAESIKRNRAAVNEDTLRQFIENLSTELENVPSKNIWNFDETNLTDNPGQKRVLTKRGCKYPKIRNSSKTSFSLMFCGSAEGELLPLYVVYKAQHMWSTWTEGGPKYTRYASTPSRWFDGAVFTDWFEGQLLPRLKKLEGKKVVLCDNLSSHITVKTLKLCKENNISLICLPANSTHLTQPLDIAFFRLLKIAWRKILANWKESEEGISYTVLQKQHFPPLLTKLMQAIEPNTVANLKSGFRKCGIVPINVELLQRLPQGCNQEAIENSFIANLDNRRQEVTKPLRKTRKRMNIIAGKSISAEDVFGNEEVENNIETPQNSTNKDDILCNDSSGDDVETEMKEANDEADFINVCNELASGMKSKDLLQLQPIVRQVERYVAFTYEGEIFAGQIVYFNDQEVTISAMQKSLKCWKWPAKADIMSYPWEDVKGGLDAPKQISKRGLYAIPQLAAFWEK
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -