Eads023163.1
Basic Information
- Insect
- Exocentrus adspersus
- Gene Symbol
- -
- Assembly
- GCA_029955175.1
- Location
- JANEYG010000215.1:199889-201670[-]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.2e-10 9.3e-08 32.4 0.0 5 39 22 56 19 60 0.92
Sequence Information
- Coding Sequence
- ATGCCTCGCAATTATCGTAAACAACTAGGACCCCGGCAAAATCGAAATTACGATCCAGTTTACCTCGAAAGGGCAATTGCAGCAGTTCGCCGAGGAACACTTAGCATAAGAACAGCCTCCGAACAATATGCCATTCCGTACACCACTTTACATCGATGGgtgaataataataaccttTTGGCTTATGGTAGACCACCAGCCCTTGAAAATTTAGAGGAAGAGAAATTAGTGAAAGTTCTTTTAATTTGTGCTGAGTGGGGGTTTCCTATGAAGAGCTTCGACATTAGATATATAGTgcaacaatatttaaataaaagtggaAAGCGAGAAAAAAGGTTCAGTGACAATTTACCTGGGTTGGACTGGTTTAAATCTTTTATGGCCAGGCATCCAAACTTAACGATCAAGTTTGCTGAAAACACTAAAAGGGTTAGAGCTGCTGTGACCTATGAAGTGGTCGAAACATATTTCTCCAATCTAAAGCAATCGCTAAAGGATGTGCCATCGGCAAATGTATTGAATTATGACGAAACTAATTTCGCCGATGATCCCGGAGCAGTGAAGGTTGTGGTAAAACGCGGGATAAAACATGCCCACAGAATCATGGATACATCAAAGAGTAGCACCAGTGTCATGTTCGCCATATCAGGCGATGGAAATTTACTTCCACCTTATGTGGTGTACAAAGCAAAACACCTCTACCCCGGATGGACTGAAGGCGGATTTCCAAATTCAAGGTATAACCGTACGGTGAGCGGTTGGTTCGATGCGAATACTTTTGAAGACTGGTTTGTAACAACCGCTTTGCCGTATTTTCGAAACCTTGATGGACCAAAACTTATTATCGGAGATAACCTCTGCAGCCATCTCACAATTAGCGTGATTCAAGAATGTGAGAAAAATAACATCCGATTCGTCTTGTTACCCCCTAATTCGACGCATCTTCTACAGCCACTTGACGTGGCGTATTTTCGGCCTTTCAAGAGATCCTGGCGcagtattttagaaaagtggaaattaaaaaatcgagGTGTGCTGCCTAAAACCGTATTTCCCACATTGCAATCCATTGAAGCTGTTGGAGCAAAATCAACAGCTAATATATTAGCTGGGTTTAAGGCTTGTGGCATAGTGCCATTTAATCCGGATacagttttacaaaaaatggtTCGCCTTAGACCCCAAGAAGGGCAGGAAAGAGTAATGGAAACAAGTTGGACGGAAGCTATAGTCTCACACCTTAGTGACCTGAGATCAGGTTCTAATGATGCGGCTCCTAAAAGAGGGAAAAGATTAACTGTGCCATCCGGACAGAGCATTGCAGCATCTGATCTTCTGCCAGAACTAATAGAACCAGAGGATATAATAGAAATTAGTGGAGAAGGGGGCAATGAAAGTGAGGAGTTAATGGAAACTGAAGAAGACAACACATCTGAAGATCAATCAGCACAAACAAGTTCTGAGAATTTACCATCTGTATCACATGGTAAAGTTGACCAGAACTTGAATAAATTCAGAAATGGCGATTTTGTAATTGtcaaattcaaaacaaataaaagggACAGGTTGTATGCCGCAAATATACTATcacaaaatgaaaatgaatacACAGTAAACACCCTGAGAAAGAAGGACACTTcgaaacaaacattttttgtcaATCCGAATGTGCCAGACATTGTTACAGTGGAAGAATCGCAAatagtcaaaaaaatatatgggcATGCTGGTAGACGGGGACAGTTTGTTCTTAATGATATTTCAAACTATTGTTTAGAGTGA
- Protein Sequence
- MPRNYRKQLGPRQNRNYDPVYLERAIAAVRRGTLSIRTASEQYAIPYTTLHRWVNNNNLLAYGRPPALENLEEEKLVKVLLICAEWGFPMKSFDIRYIVQQYLNKSGKREKRFSDNLPGLDWFKSFMARHPNLTIKFAENTKRVRAAVTYEVVETYFSNLKQSLKDVPSANVLNYDETNFADDPGAVKVVVKRGIKHAHRIMDTSKSSTSVMFAISGDGNLLPPYVVYKAKHLYPGWTEGGFPNSRYNRTVSGWFDANTFEDWFVTTALPYFRNLDGPKLIIGDNLCSHLTISVIQECEKNNIRFVLLPPNSTHLLQPLDVAYFRPFKRSWRSILEKWKLKNRGVLPKTVFPTLQSIEAVGAKSTANILAGFKACGIVPFNPDTVLQKMVRLRPQEGQERVMETSWTEAIVSHLSDLRSGSNDAAPKRGKRLTVPSGQSIAASDLLPELIEPEDIIEISGEGGNESEELMETEEDNTSEDQSAQTSSENLPSVSHGKVDQNLNKFRNGDFVIVKFKTNKRDRLYAANILSQNENEYTVNTLRKKDTSKQTFFVNPNVPDIVTVEESQIVKKIYGHAGRRGQFVLNDISNYCLE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00721935; iTF_00721939; iTF_00721938;
- 90% Identity
- iTF_00721935;
- 80% Identity
- -