Eads022623.1
Basic Information
- Insect
- Exocentrus adspersus
- Gene Symbol
- clz9
- Assembly
- GCA_029955175.1
- Location
- JANEYG010000198.1:5021-6710[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 5.8e-11 2.5e-08 34.2 0.0 5 39 22 57 18 61 0.85
Sequence Information
- Coding Sequence
- atGCCAcgaaaatataagaaaaaactgGGTGCATACGGAAAGAGGAACTACAATCCGCAGTATTTAGAAAGAGCGTTGAACGCAGTACGGCAAAAGAAATATTCCATGCGAAGAGCATCAGAGTTTTATGGAGTGCCATACACTACTCTGAATCACCATTTCCACAACAGACATCCATTACAGTATGGAGGACAACCAGTTCTTGACAGAGAATGTGAAAATTTATTGCTGAATGCTCTTCAAACTTGCGCTGAGTGGGGGTTCCCCTTAAAACCAATCAATATTCGAGAAATTGTTcaacagtttttaaataaacgtgGTATCACAGAAAGGCGATTCCAGGATAATTTACCTGGAGAAGGCTGGTTCAATGGGTTTATGGCCAGGCATCCTGAACTCACTATCAAGATGGCAGAGAATACAAAGCGAGTGCGAGCGGCTGTAACATATGAGAGCATTGAAGAATATTTTCGAAACCTGAGAGATGCCATGAAAGATGTTCCACCACAGAATTGTGTAAATTATGACGAAACCAATTTCGTTGACAACCCTGGAGCTGCTAAAGTAGTGATGAAAAAAGGAAGCAAACACGCCTACAGAACGCTGGATACTTCGAAAACTAGTATAACTGTAATGTTTGCAATCGCCGGCAATGGAGCGCGTCTTCCCCCGTACGTCGTTTATAGAGCCAAACACATTTATGAGGGGTGGACAGAAGGGGGATTGGAAGGTGCGATTTACAATAGGTCGATCAGAGGATGGTTTGATTCCGAGTTGTTCGAAGATTGGTTTCGGAGAGTAGCAATaccatattttagaaaattggaaGGCCCTAAATTGCTTATTGGAGACAATCTGAAGAGCCATCTTACTATTGATGTTATACAAGAATgcgaaaaaaatgatattaaatTCGTCCTACTGCCACCTAATTCAACTCATATGTTGCAGCCGCTTGATGTGGCATATTTTCGCCCACTTAAAGGAGCATGGAGAAAAACATTGGAAgaatggaaattaaaaaacaaaggcGTGATACCAAAAACTGTGTTCCCTACGTTGCTTAAAAAAGCTGTAGAATCACTTGGAGATCGAGAAGGAGATAATGCACGAGCTGGGTTTAAAGCATGTGGTATTGTGCCTTTCAACCCCGAAGttgttcttaaaaaaattaagacagtGGATAATGCTTCCGAGTCTTCAATGACTCAAGTTCTTGTAGAGCATCTCCACCAATTAAAAACCGGTCCTAACGAAGCTCCAAAGAGAGGGAAAAAAGTAAGCATAGCAGCTGGAAAAAGCATTACCAGTGCAGATTTTAACCAAggcaaagaaaataaaagaccCAAAGGAAGAAAAAGGCAGATAAGCATTAGTGATGAGGATGAAGAGTTTATTGATCTGGAGGCTTTGGAAACAGAACAAGAAAATCTTGAGATTAACGAAGACGACTATGAAATTGGGAATTGCTCCACAGATCAAGAAAGTGAAATTTCGAGACAACCCGATACACTCATATTAGGAGATTTTGTCATCACAAAATacagtacaaataaaaatcatcGGTTCTACATAAGTAAAATTCTTGAAATCTCAGAGACTGAAATGGTTATGAGTCTGTTATAA
- Protein Sequence
- MPRKYKKKLGAYGKRNYNPQYLERALNAVRQKKYSMRRASEFYGVPYTTLNHHFHNRHPLQYGGQPVLDRECENLLLNALQTCAEWGFPLKPINIREIVQQFLNKRGITERRFQDNLPGEGWFNGFMARHPELTIKMAENTKRVRAAVTYESIEEYFRNLRDAMKDVPPQNCVNYDETNFVDNPGAAKVVMKKGSKHAYRTLDTSKTSITVMFAIAGNGARLPPYVVYRAKHIYEGWTEGGLEGAIYNRSIRGWFDSELFEDWFRRVAIPYFRKLEGPKLLIGDNLKSHLTIDVIQECEKNDIKFVLLPPNSTHMLQPLDVAYFRPLKGAWRKTLEEWKLKNKGVIPKTVFPTLLKKAVESLGDREGDNARAGFKACGIVPFNPEVVLKKIKTVDNASESSMTQVLVEHLHQLKTGPNEAPKRGKKVSIAAGKSITSADFNQGKENKRPKGRKRQISISDEDEEFIDLEALETEQENLEINEDDYEIGNCSTDQESEISRQPDTLILGDFVITKYSTNKNHRFYISKILEISETEMVMSLL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00721924; iTF_00721927; iTF_00721926; iTF_00721928;
- 90% Identity
- iTF_00721927; iTF_00721928;
- 80% Identity
- -