Basic Information

Gene Symbol
ct
Assembly
GCA_029955175.1
Location
JANEYG010000046.1:1060562-1073838[+]

Transcription Factor Domain

TF Family
CUT
Domain
Homeobox|CUT
PFAM
PF02376
TF Group
Helix-turn-helix
Description
The CUT domain is a DNA-binding motif which can bind independently or in cooperation with the homeodomain, often found downstream of the CUT domain. Multiple copies of the CUT domain can exist in one protein (eg Swiss:P10180).
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 4 7.3e-28 7.3e-24 84.3 0.0 2 72 272 343 271 348 0.95
2 4 1.2 1.2e+04 -2.9 0.0 34 55 376 397 369 399 0.79
3 4 1.7e-32 1.7e-28 99.2 0.0 2 77 675 751 674 753 0.96
4 4 1.4e-30 1.4e-26 93.0 0.0 3 75 886 959 884 963 0.95

Sequence Information

Coding Sequence
ATGTCCCAACAGAAACGAATCAGTCAGTTGCTGGAGGAGGTGCAGAGGCTCCAGGGGTGCATAGCTAAGCTCCAGGAGTCGTCCATGTCCCAGATCAACAGACTGGAGGACCAGCTGGAGCAGAAGAGGCAGCACATCCTCAGACTGGAATCGAGGTTAGACTCGCAGAAAGACTACGACGATCTGAAACGAGAGATCAGCATATTGAGGTCGGATCTAGCCAACAATCCCGACGGGAAGAACATCGAGCTGTTGCTGGAGAAGTCGAAGAGCCTGGCCCACGAGGGCAGGGACAAGTCCCCATCGAGAGAAAGTGAAGGGGTGGAACAGCACCCGTCGCAGCCGCCCACCCTCTCCATCACCCCTCCCAACAACCTCCCGCCCCCCCTTCCAGAACATGGACCAGCGAAGAGCACCACGCCAGTAAACCCCGATCCAGTGGCGGAGAAGAGCTCGGCGTCGACACCCCAACCTATCGAACACCAGCCCTGTCAACCGTCACCTCCGGTGGAGAACCTCGTCAACGGCAACCCGAAGAGCCCGCAAGAGGACAACAACAACCACCATGTCAGCAACAACAACATTCCCCTCACGGCCACCATGTGCGCCGTGAACAACTTCCTTAGGAGCGAGGACACCCTCAAGAGTCCGTACAGATTCGACGACCACAGATCCCCGTTCAAGTTCGCGGAGGAGCTGGGGATGGCGCCCGGGTCCATGGTGGGGAGGCTGGGAGAGAGCCTCATCCCCAAAGGGGATCCCATGGAGGCCAGGTTACAAGAGATGCTGAGGTACAACATGGACAAGTACGCGTCGCAAAACTTAGACACCCTACACATAGCGAGGAAGGTGAGGGAGCTGCTGTCCATCCACAATATCGGCCAAAGACTCTTCGCCAAGTACGTGTTGGGTTTGTCCCAAGGCACCGTGTCCGAATTGCTATCGAAACCCAAACCGTGGGACAAGCTGACGGAGAAAGGACGGGACAGCTACAGGAAGATGCACGCTTGGGCGTGCGACGACAACGCCATCTTGCTGCTGAAATCACTCATACCAAAGAAAGACCATTTTTCATCAACAGGCAAATCTGAAACGGGAATGCCGACCTTCGGTAGATCCGAAAGCGATCTCACCGAAGAAAGATTGGCTCATATACTGAACGAAGCCAACCAATTCCAACACATGAAACAGCAACAACCACCTCAGCCGGAAGACAGCCACAGCAACGAAGACTCCAAATCGCCGCACGGGTGCAGCAGCCCGTTTTCCAGGGATTCCTCGTTGAATAAACGCTTGAAGAAGTACGAAAACGATGACATCTCCCAAGAAAAAGTCGTTAGGATCTACCAAGAAGAACTGGCCAAGCTCATGGGTAGGAGGATGGACGATATGCGCAATCCTAGAGAAGGACCTTTTCCTGGTATTTTCCTCCCACAACTGTTTAGCGGTAACACCATGGACAGGACCCATGAGGATATCCGCATAGCCTTGGACGCGTACCACCGCGAACTTGCAAAGCTCAACCAAGGCCAACCCCCAACCCAAATGCCCTTAAGTCTCTTGGCCATCCAACAGCAAGCGCTTGCCCACCACCACCAACAACAACAACACCACCAGCAGCACCAAGCACAAAACCAAAGCTCCAACGGAGGCGTACAAGACCTGTCGATACCAAAAGACAAAATCAAGATGATGAACGGGATGATAGACGACAAGGAAAAGGACGACGACGCAATGTCGCGTCATTCCGGTTCGGCTTTCAGCCTGGTGCGCCCTAAAATCGAACCGGGTACCCAACAGAGCACCGGATCCACAGCTTCCAGTCCTTTAGGCAACTCGATCCTACCTCCCATCACTCCCACGGATGATTTTTCCGGTTCCGCAGCAGCATCACCACTACAAAGAATGGCAAGCATCACCAACTCCCTCATATCACAGCCTCCGACACAACCGCATCACTCTACCAATAACAGACCTCTAAAGGCTGTCCTTCCACCGATCACCCAACAACAGTTCGACATGTACAATAACCTCAACACCGAAGATATCGttaagaaagttaaagagcaGCTCAGTCAGTACTCGATAAGCCAAAGACTGTTCGGAGAGAGCGTACTGGGTTTGTCGCAAGGTTCCGTCAGCGATCTCCTAGCCAGACCGAAACCTTGGCATATGCTCACCCAAAAGGGAAGAGAACCGTTCATCAGAATGAAAATGTTCTTGGAAGACGACAACGCTGTACATAAACTAGTAGCAAGCCAGTACAAAATAGCACCAGAGAAACTGATGAGAACTGGCGGGTATGGAGGAGCTTGCAGCTCCATCGGCAAACCCATGCCTCCCACCACAAAAATGCTATCCGAAGCAGCCGGTCTGCTAAACAAGATGCAGGAGTCTCAGAATATCTTGCCGCCCTCTTTGCAACTGGGACCGCCGCCGAGCTCAAACCCCCAACCGCCCCCACCTCCCATGCTTCTCACTCCTCCGGGACTACCTCCGCATCACGCTATCAATTTACAAAACCAAGAATTGATGAAGAAATCGAACCAAAGCCCTCACGGCATTCCACATTCCCCGATGGGACAGCAACACGCCTCCTTGAGGAACATGCACCAGCACATGTCACCCAGCGTTTACGAAATGGCGGCGCTGACCCAGGACCTGGACACCCAAGTCATCACTACCAAGATCAAAGAAGCTTTACTCGCCAATAATATTGGACAAAAGATATTCGGCGAAGCCGTCCTGGGACTCTCCCAAGGCTCAGTGAGTGAACTCCTATCCAAACCCAAACCGTGGCACATGCTGAGCATAAAAGGTCGCGAGCCCTTCATCCGGATGCAGTTGTGGCTCAACGACGCCCACAACGTCGACCGTTTACAAGCCCTAAAAAACGAAAGACGCGAAGCCAACAAACGGCGTCGCTCCTCCGGCCCCGGCGCTCACGACAACAGCAGCGACACCTCCTCCAACGACACCTCGGAATTCTACCACTCCAATTCTCCAGGTCCTGGACCGCCATCGGCTAAAAAGCAACGCGTGCTCTTCAGCGAAGAGCAGAAGGAAGCGCTGCGGCTAGCTTTCGCTCTAGATCCTTACCCCAACGTGGCAACCATCGAATTCCTAGCCGGGGAACTGGGACTGTCCTCGAGGACCATCACCAATTGGTTCCACAATCACAGGATGAGACTGAAGCAGCAGGTGCCGCACGGGATGCCTTCGGACTTACCACCGCGGGACCAGACCGGCAACCAACAACCCTTCGACCCCGTCCAGTTCAGATTGCTGTTAAACCAAAGATTGCTCGAGTTGTCCAAGGAACGGATGGGGCTCAGTGGCGTGCCGTTGCCCTACCCGCCCTACCTTGCAGCCAACACTAACCTAGCTGCCCTGATAAGTCGAGGATTATTGCCTACCGGCGACATGGACTTGTCGGCTTTGAACAACGCCGTCAAAGAGCAGATGAGCGGTCTGGACTTGTCGATGACTTCCTTGAAACGGGAACCCGGCGATTTCGATGACGAAGACGACGTGGAAAGTAATGTGGGATCCGAAGACTCGAATATGTCTGGAGGGAGCATGCACGGAGAAGTGAAGATTGAACCCAAAGAAGTACCTGCGAGCCAAGGTAGGTCATCGAGGAGAAAGCCCGCCGCGCCCCAGTGGGTCAACCCCAATTGGGAGGAGGAAAAGGAGAAGACTAGTACCGGAGACGAGGTTATAATAAATGGCGTATGCGTGATGCAGACAAGTGAAGACTACGCCAGGCGAAACGCGGAGGAAACCGTTCACGTCGAACCTCAAGCCGTCATGGATCGCTTCGATGACGACCAGAGCGATTCGTCGTCGGTGAGCAACGAGAATGACCAGCACGAGAAGAGCGAGGAGAAAAGGGACGAGGATCACGAAGAGAACAACGAAGATAGCGAATTGAAGAATGAAGATAGCGAAAGTAAGGTGGTTAAGCAAGAGAACGAGGAAGAGAGGTGGGAGTACTGA
Protein Sequence
MSQQKRISQLLEEVQRLQGCIAKLQESSMSQINRLEDQLEQKRQHILRLESRLDSQKDYDDLKREISILRSDLANNPDGKNIELLLEKSKSLAHEGRDKSPSRESEGVEQHPSQPPTLSITPPNNLPPPLPEHGPAKSTTPVNPDPVAEKSSASTPQPIEHQPCQPSPPVENLVNGNPKSPQEDNNNHHVSNNNIPLTATMCAVNNFLRSEDTLKSPYRFDDHRSPFKFAEELGMAPGSMVGRLGESLIPKGDPMEARLQEMLRYNMDKYASQNLDTLHIARKVRELLSIHNIGQRLFAKYVLGLSQGTVSELLSKPKPWDKLTEKGRDSYRKMHAWACDDNAILLLKSLIPKKDHFSSTGKSETGMPTFGRSESDLTEERLAHILNEANQFQHMKQQQPPQPEDSHSNEDSKSPHGCSSPFSRDSSLNKRLKKYENDDISQEKVVRIYQEELAKLMGRRMDDMRNPREGPFPGIFLPQLFSGNTMDRTHEDIRIALDAYHRELAKLNQGQPPTQMPLSLLAIQQQALAHHHQQQQHHQQHQAQNQSSNGGVQDLSIPKDKIKMMNGMIDDKEKDDDAMSRHSGSAFSLVRPKIEPGTQQSTGSTASSPLGNSILPPITPTDDFSGSAAASPLQRMASITNSLISQPPTQPHHSTNNRPLKAVLPPITQQQFDMYNNLNTEDIVKKVKEQLSQYSISQRLFGESVLGLSQGSVSDLLARPKPWHMLTQKGREPFIRMKMFLEDDNAVHKLVASQYKIAPEKLMRTGGYGGACSSIGKPMPPTTKMLSEAAGLLNKMQESQNILPPSLQLGPPPSSNPQPPPPPMLLTPPGLPPHHAINLQNQELMKKSNQSPHGIPHSPMGQQHASLRNMHQHMSPSVYEMAALTQDLDTQVITTKIKEALLANNIGQKIFGEAVLGLSQGSVSELLSKPKPWHMLSIKGREPFIRMQLWLNDAHNVDRLQALKNERREANKRRRSSGPGAHDNSSDTSSNDTSEFYHSNSPGPGPPSAKKQRVLFSEEQKEALRLAFALDPYPNVATIEFLAGELGLSSRTITNWFHNHRMRLKQQVPHGMPSDLPPRDQTGNQQPFDPVQFRLLLNQRLLELSKERMGLSGVPLPYPPYLAANTNLAALISRGLLPTGDMDLSALNNAVKEQMSGLDLSMTSLKREPGDFDDEDDVESNVGSEDSNMSGGSMHGEVKIEPKEVPASQGRSSRRKPAAPQWVNPNWEEEKEKTSTGDEVIINGVCVMQTSEDYARRNAEETVHVEPQAVMDRFDDDQSDSSSVSNENDQHEKSEEKRDEDHEENNEDSELKNEDSESKVVKQENEEERWEY

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01368896;
90% Identity
iTF_01014037;
80% Identity
iTF_00721880;