Basic Information

Gene Symbol
Kdm5
Assembly
GCA_029955175.1
Location
JANEYG010000004.1:1700684-1710633[+]

Transcription Factor Domain

TF Family
ARID
Domain
ARID domain
PFAM
PF01388
TF Group
Helix-turn-helix
Description
This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 2 6.3e-25 2.1e-21 76.8 0.0 2 89 118 201 117 201 0.94
2 2 0.078 2.6e+02 2.8 0.0 26 67 1241 1283 1224 1300 0.74

Sequence Information

Coding Sequence
ATGAAtacaaaagtagaaaaaccaataaataatggTTCAAATGGCCTCAAAAGCCATCCTGGAAGTTCAAAGACTTCTCCAATAAAATGTAGTGACCACTATTCACAGTACAAAGAAGAAACATTTCAATTTGAAGTACCACCAGAGGCCCCAGTTTTTTATCCTACTGAAGAAGAATTTCAGGATCCCTTAGCCTACATTGCCAAAATAAGACCCATAGCCGAAAATACAGGcatttgcaaaataaaaccACCAGCACATTGGCAGCCACCATTTGCTGTAGATGTAGACAAATTACGTTTTACACCTAGGATACAGAGGTTAAATGAGTTAGAGGCAAAAACCCGCgtaaaactaaattttctaGATCAAATAGCAAAATTTTGGGAATTACAAGGTTCTTCATTGAAGATCCCGATGGTAGAACGAAGAGCTCTTGACTTGTATACGCTGCATAGAGTCGTTCAATTGGAAGgtGGTTTTGAATGTGTCACCAAAGATAGAAAATGGTCAAAAGTTTCTCAAAGAATGGGTTATCAAATAGGAAAAAGTATCGGAACTATATTAAAAACACATTATGAGAGATTACTTTATCCATTCGATGTATTTAAACAAGGGAAAACTATGGACATAAAAATTGAACAAACATCAGAAGACACTGAGAAAGCTGATAAAGATTATAAACCTCACGGTATTGTAAACCGTATGCAAATAAAACCACCACCTGAAAAAAATGCACGAAGGTCTAAACGGTTTGAGAATGATGAAAGCAAGACTGAAaatttagctcttaaaataaaagaagaaaaaactgATGACGAAGATGTGGGAAATAAAGAACTCCGGCGCTTACAATTTTACGGAGCTGGCCCAAAAATGGCTGGTTACGATGACAAAAAGGAAAGCAAACCCAGAAGCAAGAACGTTAAATATGATTTCGATCCACTCGCCAAATATGTTTGCCATAACTGCAACCGTGGAGATGCAGAAGAGTATATGTTACTTTGTGACGGATGTGATGATAGCTATCATACGTTTTGCCTCATGCCTCCTCTATCTGAAATCCCTAAAGGTGACTGGCGTTGCCCGAAGTGTGTTGCAGAAGAGGTTTCAAAACCTATGGAAGCATTCGGTTTTGAGCAGGCACAAAGAGAGTATACCTTACAGCAGTTTGGAGAAATGGCAGATCAGTTTAAGTCGGAATATTTCAACATGCCAGTACATATGGTACCAACTGGTACAGTAGAAAGGGAATTTTGGAGGATAGTTTCTTCCATTGATGAAGACGTCACTGTAGAATATGGAGCAGATTTACATACAATGGATCATGGATCTGGATTTCCTACAAAATCTTCTTCTAACCTATTTCCAGGAGACAAAGAATATGCTGAATCTAGTTGGAATTTAAACAACTTGCCTGTACTCGAAGGATCTGTACTTGGTTACATAAATGCTGATATATCTGGAATGAAGGTACCTTGGATGTATGTTGGTATGTGCTTCGCAACATTTTGCTGGCACAATGAAGACCATTGGAGCTACTCCATAAATTATTTGCATTGGGGTGAAGCAAAAACTTGGTATGGCGTACCAGGAAGCAAAGCTGAAAATTTTGAGGAAACCATGAAATCAGCAGCTCCAGAGTTATTTCATTCACAGCCTGATTTACTTCATCAATTAGTAACTATAATGAATCCCAACATTCTAATGAATGCTGGTGTTCCTGTATACAGAACCGATCAACATGCTGGAGAATTTGTAGTTACTTTTCCCAGAGCCTACCATGCTGGATTTAATCAAGGTTACAATTTTGCCGAGGCTGTAAATTTTGCACCAGCTGATTGGTTGCGCATGGGTCGTGAATGTGTTTTACATTATTCACATCTGAGACGCTTTTGCGTATTTTCACACGACGAGCTAGTGTGTAAAATGGCATTAGATCCAGAAAAATTGGACTTAACTATTGCCGCGGCAACCTATCAGGATATGCTTGTAATGGTTGATACTGAAAAGAGGTTAAGGAAGACTTTACTAGATTGGGGAGTGACCAATGCGGAGCGTGAAGCTTTTGAACTGCTACCTGACGATGAAAGGCAATGTGAGGTTTGTAAGACGACCTGTTTTCTATCAGCAATTACTTGCAAATGTACAACAGATGTTCTAGTTTGTTTGAGGCATTATAAAAACCTTTGTGAATGTCCACCACAAAATCGTACCTTGAGGTATCGTTACACGTTAGATGAATTGCCAGTTATGTTGAAAGCTTTAAAATTGAAGGCCGAATCTTTTGATCATTGGGTTGCTCGAGTAAAAGATGCCCTGGATCCAAAAACGCCAAAGACTCTTAATCTTTCTGATTTAAAAGCTTTATTAAGTGAAGCTGATGGTAAAAAGTTTCCTAAATGTGATCTACTTCAGACTTTAACCAGTGCTGTGGAAGATGCTGAAAAATGTGCCAGTGTTATACATCAATTAGATCTGAATAAAATGAGGACACGAACGAGAAATtctaatgatacaaaatataagTTGACTGTTGAAgaattaacattattttgtgAGGAAATTGATAGCTTAGCTTGTATTTTGGAGGAAGCCAAAAGTATTAGAGAACTTCTTCAGCAAACTAGAAAATTTGAAGAAACTAGTACACGTTTATTATCTTTATCTTTAGCAGACTGTTCCATTAGTGAACTTGAGGCTTGTAGTGTTCATGGAGGTGGACTTTGCATTGAATTGCCAAATTTACGGTCAATAGGGACTCGGTTGAAGCAAGTACAGTGGCTCCGTGATGTAGATACTTACCGGAATAAAACGGATGTGATGGGTTTAGATGCAATAAAAGATCTCATACGTGAGGGTACTATGATACCACCGCATCCTGAAATGGAAGAAGAGTTATCAAAGCTACAAGGTATACTTCAAACCAGTGAAGAATGGGAAGAACAAGCTGGTGAAGTACTAAAATCTGAAGAGAATAATGTGTTGATTCAAGTAGACAAATTACTCAAAGAAGCGTCTAAGATCTCGTGCTATTTACCTACGGAAGGACACCtatatgattcaatgaaaaaGGCAAGGGACTGGTTGAAATTATTGGAAGAAATGAATTCAGCTGAATATTATCCATATTTTAGTGCAATGGAAGAACTGATAAAAAAGGGCAAATCACTGGCTCTACATCTTGTGGAAGTAGATAGAATGAATGAGTATCTTAGTTTAGCAACTAACTGGAAAGAAAAGACGTGTCGAGCATTCTTAAGGAAAAACTCGAATTGCACACTCATGGAAGCATTATCCCCCAGGGTGACAGTTCCTAATTTAGTTAAAAGCAACAAGAAAACTAAGGTTGTAGATGAAGAAAGTAGTCCAATATCTCTAACTAATGCAATGGATCCAGCTGCAGTAGTAGCTGTATTTAAAGATGCTGAAGATGCAGAAATGGCTATGATCAAGAAGTTACGGATAGTGAACATGGCAAAAAGTTTAGACCCCAGTGAAGGACATACGTTTTGTATCTGTGGTAGGGGTTTGTATGGTGTTATGATGCAGTGTGAATTGTGCAAAGATTGGTTCCATGCTAGCTGTACCCAACTCCCAAAAGTTGCAACTACAAAGTACAaaggaaattttacaaatatagcGTTGCATATGGGCTTTAAAGACTGTAAATTCCTATGTCCAAATTGCCAACGCACGAAGCGTCCTCGATTAGATGTTATTTTAGGATTATTGATGTCATTACAGAAATTATATGTACGAGTTCCAGAAGGCGAGGCTCTACAGTGTCTCACAGAACGGGCTATGAATTGGCAAGATAGGGCTAGGCAGTTACTGCAACATCCCGAACTGGAAAAGGCAAAAGCCAAATTAACTATGAATCCTGAGCTGCACCAAAGGGTTCAAGAAATAACTCCATACAGTGGTGTGACTGAAGAAGGTGTAACTTGTGACAGTGGTATTAACGATTCTGATGATGCTTCTAGGGAATCCAAAGATTCAGATGACCGCATGGGGGAACATGCTTATTCTTTACATCTTCCAAAAGTTGGCGAAGGAGAAGACTATATATTGGATATTAACATTGAGGTGAAGAAACAACTAGAAGAATTACTTATGGAGGGTGACTTGTTAGAAGTATACCTAGATGAAACATTTGCTTTATGGAAACTTATGCAGGCTTCGAGGGATCCAGAGAGGGAACCTGTGCTTATCGATTTTGATGCACACTTGAAAGGTACACCTAAAAAAAGGGGGCGAAAGCGTCTTTCTGAAGAACTAGAATCGGCTAAAAAAGGGGGCAAAAACAGTGAAGGTAGAAGGGGAGAAAAAGATAAGGGGTCtgatgatgatgatgatgaagcTTGCGCCGCAAATGGTTGTCAGAAGCCCACGGGGCAGAACGTTGACTGGGTGCAATGTGATGGAGGATGTGAACAGTGGTTTCATATGGCATGTGTTGGCTTATCAGCAGAGGACATAAATGAAGATGAAGATTATATTTGTATAACTTGTTCAAGAACAACTACATATGAGAATCTGAACGATAGTCGATCAAGTAGTCCTAGATCTCCCGATTCAACTCAGCCTTCCACATCTAAAGACTTTTCATAG
Protein Sequence
MNTKVEKPINNGSNGLKSHPGSSKTSPIKCSDHYSQYKEETFQFEVPPEAPVFYPTEEEFQDPLAYIAKIRPIAENTGICKIKPPAHWQPPFAVDVDKLRFTPRIQRLNELEAKTRVKLNFLDQIAKFWELQGSSLKIPMVERRALDLYTLHRVVQLEGGFECVTKDRKWSKVSQRMGYQIGKSIGTILKTHYERLLYPFDVFKQGKTMDIKIEQTSEDTEKADKDYKPHGIVNRMQIKPPPEKNARRSKRFENDESKTENLALKIKEEKTDDEDVGNKELRRLQFYGAGPKMAGYDDKKESKPRSKNVKYDFDPLAKYVCHNCNRGDAEEYMLLCDGCDDSYHTFCLMPPLSEIPKGDWRCPKCVAEEVSKPMEAFGFEQAQREYTLQQFGEMADQFKSEYFNMPVHMVPTGTVEREFWRIVSSIDEDVTVEYGADLHTMDHGSGFPTKSSSNLFPGDKEYAESSWNLNNLPVLEGSVLGYINADISGMKVPWMYVGMCFATFCWHNEDHWSYSINYLHWGEAKTWYGVPGSKAENFEETMKSAAPELFHSQPDLLHQLVTIMNPNILMNAGVPVYRTDQHAGEFVVTFPRAYHAGFNQGYNFAEAVNFAPADWLRMGRECVLHYSHLRRFCVFSHDELVCKMALDPEKLDLTIAAATYQDMLVMVDTEKRLRKTLLDWGVTNAEREAFELLPDDERQCEVCKTTCFLSAITCKCTTDVLVCLRHYKNLCECPPQNRTLRYRYTLDELPVMLKALKLKAESFDHWVARVKDALDPKTPKTLNLSDLKALLSEADGKKFPKCDLLQTLTSAVEDAEKCASVIHQLDLNKMRTRTRNSNDTKYKLTVEELTLFCEEIDSLACILEEAKSIRELLQQTRKFEETSTRLLSLSLADCSISELEACSVHGGGLCIELPNLRSIGTRLKQVQWLRDVDTYRNKTDVMGLDAIKDLIREGTMIPPHPEMEEELSKLQGILQTSEEWEEQAGEVLKSEENNVLIQVDKLLKEASKISCYLPTEGHLYDSMKKARDWLKLLEEMNSAEYYPYFSAMEELIKKGKSLALHLVEVDRMNEYLSLATNWKEKTCRAFLRKNSNCTLMEALSPRVTVPNLVKSNKKTKVVDEESSPISLTNAMDPAAVVAVFKDAEDAEMAMIKKLRIVNMAKSLDPSEGHTFCICGRGLYGVMMQCELCKDWFHASCTQLPKVATTKYKGNFTNIALHMGFKDCKFLCPNCQRTKRPRLDVILGLLMSLQKLYVRVPEGEALQCLTERAMNWQDRARQLLQHPELEKAKAKLTMNPELHQRVQEITPYSGVTEEGVTCDSGINDSDDASRESKDSDDRMGEHAYSLHLPKVGEGEDYILDINIEVKKQLEELLMEGDLLEVYLDETFALWKLMQASRDPEREPVLIDFDAHLKGTPKKRGRKRLSEELESAKKGGKNSEGRRGEKDKGSDDDDDEACAANGCQKPTGQNVDWVQCDGGCEQWFHMACVGLSAEDINEDEDYICITCSRTTTYENLNDSRSSSPRSPDSTQPSTSKDFS

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00386968;
90% Identity
iTF_01226399;
80% Identity
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