Basic Information

Insect: Exephanes ischioxanthus
Gene Symbol: ush
Assembly: GCA_958510785.1
Location: OY294016.1:14719597-14724306[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0069 0.58 11.1 0.0 3 20 310 327 308 329 0.92

2 8 5.1e-05 0.0043 17.8 1.3 1 23 362 384 362 384 0.98

3 8 0.12 9.7 7.2 1.6 3 20 423 440 422 442 0.93

4 8 0.017 1.5 9.8 4.4 2 21 655 674 654 675 0.94

5 8 0.081 6.8 7.7 0.0 3 20 702 719 700 721 0.91

6 8 0.02 1.7 9.6 0.0 2 23 760 781 759 781 0.95

7 8 0.011 0.9 10.5 1.4 1 23 787 809 787 809 0.99

8 8 0.11 9.5 7.2 0.5 3 21 905 923 904 924 0.92

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0069	0.58	11.1	0.0	3	20	310	327	308	329	0.92
2	8	5.1e-05	0.0043	17.8	1.3	1	23	362	384	362	384	0.98
3	8	0.12	9.7	7.2	1.6	3	20	423	440	422	442	0.93
4	8	0.017	1.5	9.8	4.4	2	21	655	674	654	675	0.94
5	8	0.081	6.8	7.7	0.0	3	20	702	719	700	721	0.91
6	8	0.02	1.7	9.6	0.0	2	23	760	781	759	781	0.95
7	8	0.011	0.9	10.5	1.4	1	23	787	809	787	809	0.99
8	8	0.11	9.5	7.2	0.5	3	21	905	923	904	924	0.92

Sequence Information

Coding Sequence: ATGGCAGCACCCTTTTACGTCCTTCCTCATTCTCCCTGGCAGCGAGTGGCCCTGCAGGGCACACACGAACTCTTCGAACCTTCGACCTGCGCAGAGAGATGGGCCTCGGAGCTTCGCGTTGCTCTGAACGCAGCCGAGCCTGAACAGGgGGAAGATGAGGAGTGGAGCGATTCGGAGAAGACACCGTCGGTGAGCAGCGGGGTCGAGGGCGGAGGTTCGGCGGTCTCGAGTCCCGCGGCACCGGCGATCGACGAGGACTCGAGTCAACCACTGCCTCCAAGACTGACGAGCGGTAGCAATAATATTGCCGCTGCaccgacgacggcgacgacgactaTAATACCGAATTCGTCTGGCGATGACATAAGATTACGACTGAGCGTGCTGAGCGAGGGCGCCCGGAAGCGATTGGCCAGTCTCACCGAGGATTTCGAGGTCGCCAAAGGAATTCGCGAGCGTCACGGTGGAACGACGGGAACAGGAAGAACTGCGAACAGGGCGCAGGACTCGAGTCCGAAATCCGCGAGAAACGATGTCGACGACGACGTGGTCGTCTGCAGCTCGAGAACGTTCAAGGACGTCGAGGAGACGCCGAGATCGGTTTCATCGGGAAGAAGACGCGAGGCGAGCAGGAGAGACTCGGAGGACACGAGACGCTCGGACGAGCCACCGTCAGAGCCGAAGAAAATtcgtctcgacgacgaggcggCCCCGAGACTCAGACTGAATGCTAGTCTGGCGACGGATCCGGCCCTGAGACCGGGCACCGTTGCCGCTCTCACGATCAAACCGGAGAATGTATCGCCGCCCAATACGGCGCTACCCCCCGGTCTTCAAAATGCCATTGCTTCCGGACGTCTGTTCGTTCTGCCGACCGACGGAAAAGAGTCCATAACGGTAGAGCCATCGAGGCCAGCGCCGTTGATATGTCCTCCGTGCGGGATACGCTTCAGTTCGGCGAGCACTCTCGAGGCTCATCGTACCTTCTACTGCGCTCACAGACCTCGTCTAGAGGAGGAAAAcacgaacgacgacgacgaggagaagaCCGGCGGTGGGAACAAGTACGAGGTTCGCAAAGCTTACGCGTGTCCTCACTGTTCGTACAGCGCGGACAAGAAAGTCTCGTTGAATCGCCACATGAGGATGCACGCGTCGTCACCGGCAGCTCCGCCGGCTCCGACGACACCGGGAGCGGTCGTCGTCGCGAACGTTACGAACTCGACGCCGGCCAATGGCTCGCTGAACGAGGAAGCCGAGCGATACTGTCGCAACTGCGACATAAGATTCAGCTCTCTGAAGACCTACCGAGCTCACAAAACGCATTACTGCAGCACGAGGCACGTTGTCAAGGACACCCCGGCTCCTCCAACTGCGAAGGCATCTCCACCGACGAGTTCGAGTCCCGGCGACTCGCCTCCCCCTCAACCGTGTCTCGCGCTACCGACTAATCCTATCTTAATTGTACCGTATTCTCTCTTCCGCGGTGCGAGCGTTCTCGCCGCTCCGTCTCTGCCGACGCCCGACACACCGTGCTTCCTGCTGCCCAACGGATCCCTTCAGCCGATGACTCGTGGTCCAGCGCCCAGTCAGAACTCCGTTCAAGATCCGCCAGCTGTACTGAGGGTAGCGAACAAACCGGCGACACCGTCGTCCATATCCATTCCCACGTTGTCAACGTCGCCGTCCTCCGCCGCCTCCACCCCTCTCGATCTCAGTGTGAGAAGATCGCCGGTACAGCAGGACGAGAAGGAGAACAGAGTGTCGCCGGCGCCGTCGTCTCTGCCACCTCCCCCGGGTAGTCCGAGATCGAGAGGTAGCGGAAGTCCCAGAACGAGATCTCTGCCCAACACGCAGACCGGTGGATCGACTCAGCCTCCACCGCCGACGGAACTCGCTCTCAGACTAGCAGAACTTCCACCACCTCCGGTTCCCGGAGTTCTCGTTAAACAGGGAGTTTCGCGATGCAAAGAGTGCAACATCGTGTTCTGTCGTCACGAGAATTTCGTCGCTCATAAGAAACATTACTGCCAGGCGAGGGAGAGTACAGTCTGCAGTCCACCGCCTCCCGGCACGCCGTCGCCGCCCCTCGTGCAGTTAATATGCGCGGCTTGCGGCATCAAGTTCGCTTCCATGGACAATCTCGTCGCTCATCAGGCGTTCTATTGCCCGAAAAGGCCCGAACCGCAGGAGCATCACACACGGTGTCCAAAATGCAAGACGATGATAGAGGCAGGCGGAACACACACCTGCGCGAGCGGACCGACCGGCGGATGGAGGTGTCCAGTTTGCGGTGCCGTCAGTCCCACCGCCGGCGCAGCTCAGCGTCACATGGACGCTCACCAGGGCGTCAAAGCTTTTCGGTGTACGATCTGCCGTTACAAGGGTAACACTCTCCGTGGTATGAGGACGCACATAAGAATGCACTTTGAGAAACGAGGAACGGATCTGCAGGAGGAAAATTACATCACGTGCGTACTGGACGACGACGCGACAGTACCAACGCCCGAACCACCTCCGGCGACAACACCCGAGGAAATACCGGCGGAAGTTCAGGTTAACGGCAAGACGGAGGTGAGAAAGAGTCCTCAGCCGCCCCCACCGCCCCCGCCTGCTCCGACTACCGCAGTGCAGAGCAAGGTGAAACAGGAACGTGAAGACACACCACCGCCCGAGGAGAGTCTCGATCCTAGCAAAACCGGGCCCCGCTATTGTCGCTCGTGTGACATAAGCTTCAATTACCTGAGCACATTCATAGCCCACAAAAAATTCTACTGCTCGAGTCACGCTGGCGAGGcgagcaacaacaacaacaataacaataacaacaactcGAGCAGCcacacgacgacgacgacgacgacgcccacgacgacgacgaccccTCCAAGCGGTAGAACCGAGGCTTCCGTACTCTAG
Protein Sequence: MAAPFYVLPHSPWQRVALQGTHELFEPSTCAERWASELRVALNAAEPEQGEDEEWSDSEKTPSVSSGVEGGGSAVSSPAAPAIDEDSSQPLPPRLTSGSNNIAAAPTTATTTIIPNSSGDDIRLRLSVLSEGARKRLASLTEDFEVAKGIRERHGGTTGTGRTANRAQDSSPKSARNDVDDDVVVCSSRTFKDVEETPRSVSSGRRREASRRDSEDTRRSDEPPSEPKKIRLDDEAAPRLRLNASLATDPALRPGTVAALTIKPENVSPPNTALPPGLQNAIASGRLFVLPTDGKESITVEPSRPAPLICPPCGIRFSSASTLEAHRTFYCAHRPRLEEENTNDDDEEKTGGGNKYEVRKAYACPHCSYSADKKVSLNRHMRMHASSPAAPPAPTTPGAVVVANVTNSTPANGSLNEEAERYCRNCDIRFSSLKTYRAHKTHYCSTRHVVKDTPAPPTAKASPPTSSSPGDSPPPQPCLALPTNPILIVPYSLFRGASVLAAPSLPTPDTPCFLLPNGSLQPMTRGPAPSQNSVQDPPAVLRVANKPATPSSISIPTLSTSPSSAASTPLDLSVRRSPVQQDEKENRVSPAPSSLPPPPGSPRSRGSGSPRTRSLPNTQTGGSTQPPPPTELALRLAELPPPPVPGVLVKQGVSRCKECNIVFCRHENFVAHKKHYCQARESTVCSPPPPGTPSPPLVQLICAACGIKFASMDNLVAHQAFYCPKRPEPQEHHTRCPKCKTMIEAGGTHTCASGPTGGWRCPVCGAVSPTAGAAQRHMDAHQGVKAFRCTICRYKGNTLRGMRTHIRMHFEKRGTDLQEENYITCVLDDDATVPTPEPPPATTPEEIPAEVQVNGKTEVRKSPQPPPPPPPAPTTAVQSKVKQEREDTPPPEESLDPSKTGPRYCRSCDISFNYLSTFIAHKKFYCSSHAGEASNNNNNNNNNNSSSHTTTTTTTPTTTTTPPSGRTEASVL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_01207679;
90% Identity: iTF_00059009; iTF_01364961; iTF_00058257; iTF_00059736; iTF_00905699; iTF_00397627; iTF_00841412; iTF_00398395;
80% Identity: -