Eisc004246.1
Basic Information
- Insect
- Exephanes ischioxanthus
- Gene Symbol
- lola
- Assembly
- GCA_958510785.1
- Location
- OY294016.1:22555878-22559040[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 8.9 9.7e+03 -3.3 0.1 4 20 102 118 101 119 0.73 2 2 1.4e-08 1.5e-05 24.9 0.1 9 40 409 441 408 446 0.87
Sequence Information
- Coding Sequence
- ATGGAGGACGACCAGCAGTTCTGCCTTAGGTGGAACAATCACCAGAGCACGCTCATACAAAACTTCGACACACTCCTAGAGAGCGGCACGTTGGTCGACTGCACCCTGGCCGCGGAGGGGAAGTACCTAAAGGCCCACAAAGTCGTCCTCTCCGCGTGCAGTCCGTACTTTGagGGCCTCCTCAGCGAGCATTACGATAAACATCCCGTCTTCATACTGAAAGACGTAAAATTTAAAGAACTGAAAGCCATGATGGACTACATGTACAGGGGAGAAGTTAATATTTCCCAAGACCAATTGGCAGCACTCCTAAAAGCGGCCGAGTCCCTACAAATAAAAGGTCTCTCGGAGAGCAAAACGGGGGGCGGTGGTGGCGGCAAGAGCGAGTCATCGAGgcaacagcaacaaaaagTCGTAACACAGCCTACGGCACCGTCGTTGGACATTCCACACGCGTCTTCCGGTCTCACGATAGAAAAGAACAGCAAAGTTCCTAGACAGAGTTTGGCTCAGAGCTCCGTAAGTGACCTACCCGAAGACTCGGCCAGTCCTCAGCTACCTAAGGGGCTCTCCTCcagGGAAGGCTCGCAAAGTCCAACcgcaagaaaaagaaagaggttCAGAAGAAGAAGCGTCGGTGACGATAATTCGGTTGAAAATCACGATGCCTCAAACTCGAGTGACATGCCACAACAAATGAGCGTACCGTCACTCGGTGTTGCTCCGGTTGCGGACGAAAAGTCTCACGCCGATTCCACAGACTCTCTCGGCCGGTCGGCACTAATGCAACAGCTGACCAAACCTGCCGACGAACTGCTACAGATGCCACTCGAAAAACCAGAGCCCACCGATAGCTTGATCGAGCCAAAGTCCGAGTACCTGGAGGAAAACGAGGAGAGCGTCGAAGATCTGACGCTCGACGATGACATGAACGACCTCAATGAAATGGAACAAGACAACAACAGAGCCGGCCCTTCACACGACCCATCCCAACACCCTGGTAGGGGGGCGGGATCGCGGTCTCGTACTTCGAGAGGTGGTAATTCGGTCGGCGGTGATATTGGCCTCGGCGGTGATGCCCAATGGGCATCGCATTTCCTCGATTGTCATAAAAAGGCCCCGATCACGAGACGTCCGCGTCCGGACGTCGACGTAGGCGCGTTACTCAAGTCGCTGGCCAACAAGCAAGGCCGAAAGTATAGTTTAGACTCGGTTAAAATGTCCCTGGAGGCAATATTGCAACAGGGAGTTAGCACCACTCACGCATCGGAGATGTACGGAATAAATCGTTCGACACTGCAGTtctatctgaaaaaattgaacgtcgtGAGACGACGGTGGAGGCAACCGACTACCCTCGTACCGCACAGACAGTCTTGA
- Protein Sequence
- MEDDQQFCLRWNNHQSTLIQNFDTLLESGTLVDCTLAAEGKYLKAHKVVLSACSPYFEGLLSEHYDKHPVFILKDVKFKELKAMMDYMYRGEVNISQDQLAALLKAAESLQIKGLSESKTGGGGGGKSESSRQQQQKVVTQPTAPSLDIPHASSGLTIEKNSKVPRQSLAQSSVSDLPEDSASPQLPKGLSSREGSQSPTARKRKRFRRRSVGDDNSVENHDASNSSDMPQQMSVPSLGVAPVADEKSHADSTDSLGRSALMQQLTKPADELLQMPLEKPEPTDSLIEPKSEYLEENEESVEDLTLDDDMNDLNEMEQDNNRAGPSHDPSQHPGRGAGSRSRTSRGGNSVGGDIGLGGDAQWASHFLDCHKKAPITRRPRPDVDVGALLKSLANKQGRKYSLDSVKMSLEAILQQGVSTTHASEMYGINRSTLQFYLKKLNVVRRRWRQPTTLVPHRQS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00266562;
- 90% Identity
- iTF_00397414;
- 80% Identity
- iTF_00721354;