Basic Information

Insect: Euzophera pinguis
Gene Symbol: -
Assembly: GCA_947363495.1
Location: OX376182.1:308771-328736[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.067 5.3 8.3 5.0 1 23 280 303 280 303 0.94

2 14 0.00054 0.043 14.9 1.6 1 23 310 332 310 332 0.95

3 14 0.49 38 5.6 3.1 1 23 336 358 336 358 0.96

4 14 0.0017 0.13 13.4 2.9 1 23 363 386 363 386 0.96

5 14 0.58 45 5.4 0.3 3 23 393 414 393 414 0.96

6 14 0.00017 0.013 16.5 0.2 3 21 424 442 423 443 0.94

7 14 3.7 2.9e+02 2.8 0.8 2 23 450 472 449 472 0.88

8 14 0.33 26 6.2 0.8 3 19 484 500 482 503 0.92

9 14 0.0026 0.2 12.8 0.1 1 23 507 529 507 529 0.96

10 14 0.00095 0.074 14.1 1.2 1 23 532 555 532 555 0.96

11 14 0.00049 0.038 15.1 0.9 2 23 612 634 611 634 0.93

12 14 8.9e-06 0.0007 20.5 4.0 1 23 640 662 640 662 0.97

13 14 0.0012 0.096 13.8 1.7 1 23 668 690 668 690 0.98

14 14 0.0001 0.0079 17.2 0.6 1 23 696 719 696 719 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.067	5.3	8.3	5.0	1	23	280	303	280	303	0.94
2	14	0.00054	0.043	14.9	1.6	1	23	310	332	310	332	0.95
3	14	0.49	38	5.6	3.1	1	23	336	358	336	358	0.96
4	14	0.0017	0.13	13.4	2.9	1	23	363	386	363	386	0.96
5	14	0.58	45	5.4	0.3	3	23	393	414	393	414	0.96
6	14	0.00017	0.013	16.5	0.2	3	21	424	442	423	443	0.94
7	14	3.7	2.9e+02	2.8	0.8	2	23	450	472	449	472	0.88
8	14	0.33	26	6.2	0.8	3	19	484	500	482	503	0.92
9	14	0.0026	0.2	12.8	0.1	1	23	507	529	507	529	0.96
10	14	0.00095	0.074	14.1	1.2	1	23	532	555	532	555	0.96
11	14	0.00049	0.038	15.1	0.9	2	23	612	634	611	634	0.93
12	14	8.9e-06	0.0007	20.5	4.0	1	23	640	662	640	662	0.97
13	14	0.0012	0.096	13.8	1.7	1	23	668	690	668	690	0.98
14	14	0.0001	0.0079	17.2	0.6	1	23	696	719	696	719	0.97

Sequence Information

Coding Sequence: ATGAAAATGAATCAAAGTATTGTGTGCCTCGGTTGTATGGATACATTGGAGATGCCTAGCTTTCTGGATGTTAAGTCATTGGAGGCCTACGAGAGTCTTATTGGAATTTCCTTACCAATGGAAGGGCCTCCGGTTCACTTTTGCTCATTCTGTAAACGAACATTAAACAAATTTGTTACATTCAAAGCGAGATGTCTCAAAGTGGTCGAGATACTAACACAGATGAAAAGCAAAATGATAACAAAAGACCACGCAAATTATTTAAGAAATAACAATCCAGAATTGAAATTTCTGTATGTTGAAACTGAAGTTCTGTCTATAAAAATACCTGATACAGCTAAAGCTTTTGAAGTTTATAAACATATACCAAAAGAAGTTGAAGTGACAACTAAATATTTAATACATAAGACAGAAAAATCGGATGAAACGGATGATTACACTAAACTAGATAATACTACACATAATGATGAATTTTTTGATGCAAAACATGAAGAGGGTGATAGTGAATTGAAAATGAAACCTTACGAAATATGTATTAGAGATAGTAAGATAGATATTAATGTTGAACCTATAATTAAAGAATTTCCAAAAGTTATGAAAGTAAAAAAAGATGTTCCGGATGTTATAAAAGTAAAAAAAGATGTTTCGAAAGTTATAACAGTAATAAAAGATGTTCCGAAAGTTACATTAGAGAAATGTAAGACGAAAAGATATAAAAAGGGTAAATCAAAGCAAATAGTTAAAGATTACGCGAAATCAACAGGTTTCGATGTAACCTTCCTGTCGCACACAGAACAGATCCAAGAAATAGAAGACAGAAAGGTAAACGTAAATAGTCACAATTGTCGTCAATGCGGTAAATTCTGTAGTGATTCAAACGTTCTGGAGAAACATGAAAAGAACTATCACGTTTTAAAACCAAACGGTTTTGTGTGTGACGTTTGTTCTTGCGTTTTTACCAATAAACGAACGTTGCGTGAACACGTGACTGGCCACAATTGGTTGTTTAAATGTCAAAAGTGTGATTTTCAAACTAAATTGAGACCGGTTTTGCGTAAACATCAATATTATCATAAAGGAAAGTTGTTTTCTTGTAAATTTTGTGGGAAAGTTTTCGAAAAACACGCGACGTATTATTCGCATGTTAGACTTTTGCACGCGTCTGAATTGCCGTGGTGTGATTTATGTGGTGCGTTCTTTAATAGTGATAAAGGTGTTGAGACTCATAAGAAGATTAGTCATAATGTTATGGAAGAGTTTCCTAACGCGTGTAAGGATTGTGATAAAAGATTCAGGGATGATAAGGCGCTGGAAAGACATACTAATGTTAGAGGTTGCAACAACCTTTGCTGCGCTCAATGCGGTGACCCCTTCACCGGCACACAACTCCTCAAATACCATCTAGTCCAACGTCACTTCGCCGACGTTCCCGACCCGAAAACGATCGATTGCCAAACGTGTGACGTTAGGTTTTATAATTCGAAAGCGTTTGTGACGCATTCGTGCGAACGTTCGAACTTTACGTGTCGGCAATGTGGCGAGGGATTCAATACGGCACTGCTCTTGAATGAGCATGTCGTGGTGCATGACATTTTTAAATGTGAAGAGTGCGACTCGGCGTTCACGAACGCGTTGTATTACAAGCGTCACTACGCGAGACGACACACCGGCCGCGCGGTCTCGCGGGGTCGACCGCCCGGCGGTAGCGACAAACAGCAAAAATCAAGGGACTATCCGCTTGAGACGTCTGTCCGCAAGTGGTCTGTCGTCGGCGACGTTCTCAAGAAAGAGGCTGTCATTTTGACATCCACAGACGCGAAGGTGAAGAATGTCATGTGCGAATTGTGCGGGAAACACGTCAAGAGCGAGTCGGATCTGAGGACCCATCAGTCGCTGTACCACTCCGATAAAAATCTATTTTTCTGTTCGCACTGCAATAAGGGTTTCAAGAGGAAGGATTTATTGCAAACTCATGAGAGAGTTCACACTGGTGAGCGACCGTACCCGTGCCCGCGATGTACGAAGGCATTCAAGACTTACGCAGCCTGCAGAAGGCATCAGCTGGTTCACACAGGAGAGCGTAAACACGTCTGTTCTGAATGCGGAAAGGCATTTCAACTGTCTACCAGCGTGAAATGGCATCTCCGTACTGCGCATTTACACCAACCCTGGCCGAAGAGAAATAGACGGAAAGCGCGGGAAAAATTTGAAAAGACCGGCGAAGTTAATTGA
Protein Sequence: MKMNQSIVCLGCMDTLEMPSFLDVKSLEAYESLIGISLPMEGPPVHFCSFCKRTLNKFVTFKARCLKVVEILTQMKSKMITKDHANYLRNNNPELKFLYVETEVLSIKIPDTAKAFEVYKHIPKEVEVTTKYLIHKTEKSDETDDYTKLDNTTHNDEFFDAKHEEGDSELKMKPYEICIRDSKIDINVEPIIKEFPKVMKVKKDVPDVIKVKKDVSKVITVIKDVPKVTLEKCKTKRYKKGKSKQIVKDYAKSTGFDVTFLSHTEQIQEIEDRKVNVNSHNCRQCGKFCSDSNVLEKHEKNYHVLKPNGFVCDVCSCVFTNKRTLREHVTGHNWLFKCQKCDFQTKLRPVLRKHQYYHKGKLFSCKFCGKVFEKHATYYSHVRLLHASELPWCDLCGAFFNSDKGVETHKKISHNVMEEFPNACKDCDKRFRDDKALERHTNVRGCNNLCCAQCGDPFTGTQLLKYHLVQRHFADVPDPKTIDCQTCDVRFYNSKAFVTHSCERSNFTCRQCGEGFNTALLLNEHVVVHDIFKCEECDSAFTNALYYKRHYARRHTGRAVSRGRPPGGSDKQQKSRDYPLETSVRKWSVVGDVLKKEAVILTSTDAKVKNVMCELCGKHVKSESDLRTHQSLYHSDKNLFFCSHCNKGFKRKDLLQTHERVHTGERPYPCPRCTKAFKTYAACRRHQLVHTGERKHVCSECGKAFQLSTSVKWHLRTAHLHQPWPKRNRRKAREKFEKTGEVN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -