Basic Information

Insect: Euzophera pinguis
Gene Symbol: -
Assembly: GCA_947363495.1
Location: OX376182.1:330500-340499[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.00085 0.067 14.3 3.6 1 23 256 279 256 279 0.94

2 14 3.9 3e+02 2.8 4.4 1 23 286 308 286 308 0.93

3 14 0.034 2.7 9.3 3.2 1 23 312 334 312 334 0.96

4 14 0.0015 0.12 13.5 1.1 1 23 339 362 339 362 0.97

5 14 0.23 18 6.6 0.1 3 23 369 390 369 390 0.96

6 14 0.00024 0.019 16.0 0.2 2 20 399 417 398 419 0.92

7 14 0.001 0.08 14.0 0.4 3 23 427 448 426 448 0.90

8 14 0.048 3.7 8.8 1.1 1 20 457 476 457 478 0.92

9 14 0.03 2.3 9.4 0.1 2 23 482 504 481 504 0.89

10 14 6.3e-05 0.0049 17.8 1.3 1 23 507 530 507 530 0.94

11 14 7.1e-06 0.00056 20.8 0.2 2 23 603 624 602 624 0.96

12 14 8.7e-07 6.8e-05 23.7 2.1 1 23 630 652 630 652 0.98

13 14 8.1e-05 0.0063 17.5 1.0 1 23 658 680 658 680 0.97

14 14 0.00022 0.017 16.1 2.2 1 23 686 709 686 709 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.00085	0.067	14.3	3.6	1	23	256	279	256	279	0.94
2	14	3.9	3e+02	2.8	4.4	1	23	286	308	286	308	0.93
3	14	0.034	2.7	9.3	3.2	1	23	312	334	312	334	0.96
4	14	0.0015	0.12	13.5	1.1	1	23	339	362	339	362	0.97
5	14	0.23	18	6.6	0.1	3	23	369	390	369	390	0.96
6	14	0.00024	0.019	16.0	0.2	2	20	399	417	398	419	0.92
7	14	0.001	0.08	14.0	0.4	3	23	427	448	426	448	0.90
8	14	0.048	3.7	8.8	1.1	1	20	457	476	457	478	0.92
9	14	0.03	2.3	9.4	0.1	2	23	482	504	481	504	0.89
10	14	6.3e-05	0.0049	17.8	1.3	1	23	507	530	507	530	0.94
11	14	7.1e-06	0.00056	20.8	0.2	2	23	603	624	602	624	0.96
12	14	8.7e-07	6.8e-05	23.7	2.1	1	23	630	652	630	652	0.98
13	14	8.1e-05	0.0063	17.5	1.0	1	23	658	680	658	680	0.97
14	14	0.00022	0.017	16.1	2.2	1	23	686	709	686	709	0.97

Sequence Information

Coding Sequence: ATGCAACAAAACCTGGTGTGTCGGGCCTGCCTTGCGGTGGAGGGGAAGTTCTCTTACATCCACGATTTCAGCACTGCCCAGGCATACGAAAGTCTTATTGGATATCCTTTGTCACCATCAGACGGGTACCCCCAGCACCTCTGCTCGTACTGCCGTCGCAGCGTCCTCAAGTTTATGGAGTTCCGCTCCAGGTGCCTCAAGGTCCTCGAAGTGCTTCAGCAGGCTTTGGCGCAGGGACAATGGATAAGTAAACAAATTCCTCACGGACTGACGTCAAACTACCCAGATCTAAAACCTCAATACATCAGAACCAAAACCATAACATTGGACGTCACAAATGCCGAACCGGAAATTGTTTTAGTCAACGAACCGACAGATGTGACTGATTTAAAAATTGTGAAAGAAGAAGTTGATGAGAATGATGATATACATATGTGTGGTGATGATATTGCAGAAATTGATGAAGTAACAGTAAATAAACATATTGATGTCACAGCCAAATCAATCGATGTACATTTCAAAGAATTCAGTAAAGATTTTAAAGATAGAAATGAAATTAAAGTTAAAAAGAGGAAAAATGTTAAGAAAAGTAGAAAACGCGGCAGACCTAAAACAGAAAAGCGTATAAATACGCTTAAAACTTTAAATTCCAATCAGATTATAATAGATTATGCCAACTCGGCCGGTTTTGATATTAAATTCCTATCACCCGCTGAACAAGTTAAGGAAATAGATGTAAAAAGGAAAGAAATTGTATTAAGTGGACATAATTGTGAGCGATGCGGTAAACATTTTCGAGATGTGAACGCTCTAAACAGACACACGAAAGCGTATCACGTATGGAATCCGGGGAGCTTCATCTGTGACATCTGCTCTTGCGTATTCCAAAAGAAATTGACATTGAAATGCCATATCGAGAATCACAGTTGGGTATTTACGTGTCAGAAGTGCGATTTTAAGACAAACCAACAGAAGGGTTTGATGTCCCATCGGAGTTTTCATGAAGGAAAGGAGTATCCGTGTCAGTTTTGTGATAAAGTTTATAGTAAAATAACGACGTTCTTATCACATTTGAAGATGTTACATGCGTCGGAATTGCCGTGGTGTAGGTTGTGCGGTGAGTTCTTTGTTGGAGAGAAAGGGGTTGAAAAACACGTGAGACTAACTCATGATATGGTGGAGGAGTTTCCTTGCGTGTGTCCGAATTGTGACAAGAGGTTTAAGAGCGACGCCGCGCTTGAAAGACATACTGCTGTGCAAGGTTGCGCACTCCCAAACTGCGTTCAATGCGGCGAATCGTTCCCCAACGCAGCTCTGCTCAAACACCATCTAGTACAGCGACACTTCGCTAACACAACGCCAGAGCACCACGACTGTAGTCAGTGCAATCTCCGGTTTAATAACACAGATGCGCTGGGGCGACACGTGTGCGGTTCTAGTGATGTTTGCGTGCAATGCGGGGAGGCTTTTGAAAATACGCAGCTGCTTACCGATCATGTGTTTTTGACGCATGATATATTTCGGTGTGAGGAGTGCGGTAAACAATTCACAAATGGTGGTTATTTTAAGCGACATTATGAATTGTCGCATTCGGCTCGACCGAGGCGCAAGCGGGGGCCGCGACCGCTTGCCGAACGACAAGAATTTAAGAAGAGAGAGAAGAAAGATAAACCGGACGACGTCCAAAAAAGGGAGAAGTGTCCAAAACAGACAGTGGTCCGCAAATGGCGGGTCGCGAGCGAGGGAGACTCGCTCATTGAGAAGCTTGTCGAGCACGCGGCGGAGGGGCGCGGGGGGATGCCGCTCATTTGCGAACTTTGTGGGAAGGGGTTCCCGACGTGGTCCCGTCTGAGCACGCATCAGCGCTCGCACTCCGCTGAGCCGCAGTTTTCGTGTCCTCATTGCAACAAGGGATTCAAGCAGAAAGCCACACTTAAGTTACACGTGCGTGTTCACACCGGCGAGCGGCCGTACAAATGTTCCCAGTGTCCAAAAGCCTTCAGGACTTACACCGGACTCGACAGGCACTTCCTGATACACACGGGCGAGCGCAAGCACGTGTGCGCGATGTGCAACAAAACATTCCAGACATCCACGACCGTAAAAACTCACATCAAGACTGCCCACCTCCACATGCCGTGGCCGCAGCGACATAATCGGAAACGGAAGACGCAAGAGTTAGCCTTAAGTAATAATTTATTGTAA
Protein Sequence: MQQNLVCRACLAVEGKFSYIHDFSTAQAYESLIGYPLSPSDGYPQHLCSYCRRSVLKFMEFRSRCLKVLEVLQQALAQGQWISKQIPHGLTSNYPDLKPQYIRTKTITLDVTNAEPEIVLVNEPTDVTDLKIVKEEVDENDDIHMCGDDIAEIDEVTVNKHIDVTAKSIDVHFKEFSKDFKDRNEIKVKKRKNVKKSRKRGRPKTEKRINTLKTLNSNQIIIDYANSAGFDIKFLSPAEQVKEIDVKRKEIVLSGHNCERCGKHFRDVNALNRHTKAYHVWNPGSFICDICSCVFQKKLTLKCHIENHSWVFTCQKCDFKTNQQKGLMSHRSFHEGKEYPCQFCDKVYSKITTFLSHLKMLHASELPWCRLCGEFFVGEKGVEKHVRLTHDMVEEFPCVCPNCDKRFKSDAALERHTAVQGCALPNCVQCGESFPNAALLKHHLVQRHFANTTPEHHDCSQCNLRFNNTDALGRHVCGSSDVCVQCGEAFENTQLLTDHVFLTHDIFRCEECGKQFTNGGYFKRHYELSHSARPRRKRGPRPLAERQEFKKREKKDKPDDVQKREKCPKQTVVRKWRVASEGDSLIEKLVEHAAEGRGGMPLICELCGKGFPTWSRLSTHQRSHSAEPQFSCPHCNKGFKQKATLKLHVRVHTGERPYKCSQCPKAFRTYTGLDRHFLIHTGERKHVCAMCNKTFQTSTTVKTHIKTAHLHMPWPQRHNRKRKTQELALSNNLL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -