Epin003567.1
Basic Information
- Insect
- Euzophera pinguis
- Gene Symbol
- zfy1
- Assembly
- GCA_947363495.1
- Location
- OX376180.1:2532994-2537986[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 18 0.024 1.9 9.7 6.4 3 23 174 195 172 195 0.95 2 18 9e-05 0.0071 17.4 1.4 1 23 204 227 204 227 0.96 3 18 0.0098 0.77 11.0 0.9 2 23 240 262 240 262 0.97 4 18 4.9e-05 0.0039 18.2 0.6 1 23 271 294 271 294 0.97 5 18 4.1e-05 0.0032 18.4 1.3 1 23 306 329 306 329 0.96 6 18 0.00028 0.022 15.8 1.3 2 23 353 375 352 375 0.97 7 18 0.0014 0.11 13.6 1.2 2 23 385 407 384 407 0.96 8 18 0.028 2.2 9.5 1.3 2 22 412 432 411 435 0.88 9 18 0.00011 0.0087 17.1 0.0 2 23 437 459 436 459 0.96 10 18 0.00082 0.064 14.3 1.0 3 23 469 490 468 490 0.97 11 18 0.00085 0.066 14.3 3.0 1 23 495 518 495 518 0.92 12 18 0.00095 0.075 14.1 1.9 2 23 530 552 529 552 0.96 13 18 0.00044 0.034 15.2 1.3 1 23 577 600 577 600 0.94 14 18 0.096 7.5 7.8 0.5 2 23 607 628 606 628 0.94 15 18 0.044 3.5 8.9 1.7 2 23 633 654 633 654 0.98 16 18 7.3 5.7e+02 1.9 2.4 3 23 662 684 660 684 0.91 17 18 0.013 1.1 10.5 0.1 1 23 720 742 720 742 0.97 18 18 0.2 15 6.9 2.0 1 23 748 771 748 771 0.96
Sequence Information
- Coding Sequence
- ATGTCAACAAAAGATGACCTCAGAATAAAACTCGAAATTGACACTATCAAGCAAGAAAGAAAAGATCCGACAACATTCTTGCCAGAGGAGCCAATGACATACGAGATAAAAAAAAAGAAAAAGAAGAAAAAAAAGAAAAATAAAGAGCGTGATCCGTTTAGAGATTTATGCGTGAGGAATGACGAACTAACGTTGGAGATGCAGATGGATCCGGAGGTTAATATTAAAGTGGAGAATATTGAAGTAGAATTAGATTTTAATGACTTTGCCGATAACACCGGCCTCATGGTGGAGGGACCAAATAGCGAAGAAAGTCAAGAACCAGAAATAAAAATGGAACCGGATAACCACGAAGCAGTCCTATTGACATTCGAAAGTGTTGTCAAAAAAACTCTATTCGATTATACTGAAAACACAGAGTTGAAGGTGGAAGATGTAAAACCAGTTATAGATTATCCTGATAAATCTGTAATTGGGTACAGTCAGGGCATTTCAATGGCAACCGCACCTATACATTTATGTAAAGTATGCCATCTAGTCTTTCAATCGCGCAAAACTCTACGAATGCATCAAAAACGAAAGCATAAAGCGTTTAGGAAATACTTTGAACACATGTGTGATTTTTGTGGCATGTCTTATGAACAGAAGAACAGTTTGGTCGCTCATATTAGAAGGAAACACGGACCTGATGCAACTTCGGATGATGGGGAAGAAAGAACATGTGATGTTTGTTCTCTAGTCTTCAAAGGGGTTACTCGTTTACGTATGCATATGAGAAGGAAACACGGATCGTTTCAAGATTCCTTTAAATATAGTTGCGAAGACTGTGGACTTACGTACGATAAGCAAAGGAGTTTGATAGTGCACCAACAACGTAAACATTCCTTAGTTAAAAAACCAGTTGCAAATCAATGGTTTAATTGTCCGTTTTGTCCAAAAATATTTACAAGAAGAGAAACTTACGCAAGACATGTACAAAGGAAACATAAAATATCCGATGACGATGACGTGAAAAATGAATTAGATGATTTGAAAAACGAAGAGACGGGAGAAATTACTTGTAATCAATGTCGTTTGGTTTTTTCATCCGTCAACTATTTAAAATTACACATGAGAAGGAAGCATAATGCTTTGACGGAAGATTTTAGACTTAAATGTAGGATTTGTAATTTATCGTATGATAAGATAGAGAGTCTTAAAAGGCATGTTAGGAGAAAGCATGGCCTGGGATTGAATTGTGACGTGTGCAATAAACAATTTGAAAGCAGAGAAGCTTATTTAAATCATACGCATGTGAAAACGCATGTGGAATGTACAATTTGTGGGCTCATATTCGCTTCCGAAGGTAATTTAGGTAAACATCAGCGATTGACTCACAAAATTGATGCGCCAAAAAACGTATTTTGTAATTTATGCAGCGAAGGTTTTTATGATAAACGGCAATTGAAAACACATTTAATGAAAGTACATTTGAAAGTCTCGTACACTTGTAACTTTTGCAAGAAAGTCTTCAAGGCTAAGGAGAGTTACAGAAGGCATGTTATATTCAAGCATTCGGAAAGTAATAGTATGCCAAAAGATGTGCAAATGTGTGAGCATTGTTCTGCTACATTTCCTGATGAATTCGAACTCTGTCGTCATATAAATAGTGAACATGGCAACGGTGAAGAAAAAGAAAGTAATGAAATGTTAACATTTGTTAAAGAAGAGAACGGTATTAAAGATTCATTCCAGTGTATGAAATGTCCCAAATCGTACACAGCTTGGGAGCAATTGAGGGTACATCATGAACAAACTCATCGTGTAACTGAAGAAACTCAATGTCAAATGTGCGGAGAAATGGTTAAAGGGAGCTCGTTAAAGAAACATCTTAAAAATATACATGTTGAAGAGCCACAGTGCAGGTATTGCGAGTTCAAAACAAATAATCGTGCAAGTATGACGCAACATATACTAAGGCACAAAAATGTTACAACTTTACACTGTGATTATACAGGATGTCGATATAAAACTTATTACGAAGGTGCTATGCAAAGGCATAAGAAAAAGCATGCGGAAATTGGAGTAAAACTTCAATGTACTAAGTGTCCGTTTCAAACGATGAACAAATATATTTTGAGATATCACGAAGAAGCTCATATGACAGGGAAAAAACGTTATGTCTGTGATCAGTGTGATTATGCAACGATTTTGCCAGCTAATTTGGTCCAACATAAGTACAAGCATTCCGTAGAAAAAAGATTTAAATGTGAAGTATGTCCGTTCGCTACAAAGTACAATACGTCTTTAAGATTTCATGTGAAAAAGAAGCATTGTGATCTCCCGTCGCTCAGTTGA
- Protein Sequence
- MSTKDDLRIKLEIDTIKQERKDPTTFLPEEPMTYEIKKKKKKKKKKNKERDPFRDLCVRNDELTLEMQMDPEVNIKVENIEVELDFNDFADNTGLMVEGPNSEESQEPEIKMEPDNHEAVLLTFESVVKKTLFDYTENTELKVEDVKPVIDYPDKSVIGYSQGISMATAPIHLCKVCHLVFQSRKTLRMHQKRKHKAFRKYFEHMCDFCGMSYEQKNSLVAHIRRKHGPDATSDDGEERTCDVCSLVFKGVTRLRMHMRRKHGSFQDSFKYSCEDCGLTYDKQRSLIVHQQRKHSLVKKPVANQWFNCPFCPKIFTRRETYARHVQRKHKISDDDDVKNELDDLKNEETGEITCNQCRLVFSSVNYLKLHMRRKHNALTEDFRLKCRICNLSYDKIESLKRHVRRKHGLGLNCDVCNKQFESREAYLNHTHVKTHVECTICGLIFASEGNLGKHQRLTHKIDAPKNVFCNLCSEGFYDKRQLKTHLMKVHLKVSYTCNFCKKVFKAKESYRRHVIFKHSESNSMPKDVQMCEHCSATFPDEFELCRHINSEHGNGEEKESNEMLTFVKEENGIKDSFQCMKCPKSYTAWEQLRVHHEQTHRVTEETQCQMCGEMVKGSSLKKHLKNIHVEEPQCRYCEFKTNNRASMTQHILRHKNVTTLHCDYTGCRYKTYYEGAMQRHKKKHAEIGVKLQCTKCPFQTMNKYILRYHEEAHMTGKKRYVCDQCDYATILPANLVQHKYKHSVEKRFKCEVCPFATKYNTSLRFHVKKKHCDLPSLS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00073068;
- 90% Identity
- -
- 80% Identity
- -