Basic Information

Insect: Euzophera pinguis
Gene Symbol: -
Assembly: GCA_947363495.1
Location: OX376170.1:15220383-15228285[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 13 0.00038 0.029 15.4 2.2 1 20 147 166 147 168 0.95

2 13 4e-05 0.0031 18.5 2.6 1 23 175 197 175 197 0.98

3 13 0.005 0.39 11.9 5.7 1 23 202 224 202 224 0.98

4 13 0.00082 0.064 14.3 1.2 2 23 246 267 245 267 0.98

5 13 0.001 0.08 14.0 6.6 2 20 275 293 274 296 0.92

6 13 2e-05 0.0016 19.4 0.2 1 23 302 324 302 324 0.99

7 13 1.9e-06 0.00015 22.7 1.6 2 23 331 352 330 352 0.97

8 13 4.4e-07 3.4e-05 24.6 1.1 1 23 358 380 358 380 0.96

9 13 3.8e-05 0.003 18.5 0.5 1 23 386 408 386 408 0.97

10 13 0.0015 0.12 13.5 0.6 1 23 414 436 414 436 0.95

11 13 6.1e-06 0.00048 21.0 4.2 1 23 442 464 442 464 0.99

12 13 2.2e-06 0.00017 22.5 0.7 1 23 470 492 470 492 0.99

13 13 0.0006 0.047 14.8 1.1 1 23 498 520 498 520 0.97

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	13	0.00038	0.029	15.4	2.2	1	20	147	166	147	168	0.95
2	13	4e-05	0.0031	18.5	2.6	1	23	175	197	175	197	0.98
3	13	0.005	0.39	11.9	5.7	1	23	202	224	202	224	0.98
4	13	0.00082	0.064	14.3	1.2	2	23	246	267	245	267	0.98
5	13	0.001	0.08	14.0	6.6	2	20	275	293	274	296	0.92
6	13	2e-05	0.0016	19.4	0.2	1	23	302	324	302	324	0.99
7	13	1.9e-06	0.00015	22.7	1.6	2	23	331	352	330	352	0.97
8	13	4.4e-07	3.4e-05	24.6	1.1	1	23	358	380	358	380	0.96
9	13	3.8e-05	0.003	18.5	0.5	1	23	386	408	386	408	0.97
10	13	0.0015	0.12	13.5	0.6	1	23	414	436	414	436	0.95
11	13	6.1e-06	0.00048	21.0	4.2	1	23	442	464	442	464	0.99
12	13	2.2e-06	0.00017	22.5	0.7	1	23	470	492	470	492	0.99
13	13	0.0006	0.047	14.8	1.1	1	23	498	520	498	520	0.97

Sequence Information

Coding Sequence: ATGGCTATGGCACACTTGTTGGATCAAAACAAACTGAATGGAAGATGCCGCACTTGTCTCAGTGATTGTTCCGGCCAAATGTACGATATATTCGCCGGTTCAATAAATTCTACTAGTCCAGTTGACATATTGAGGTCTTGCACGTACGTAATGATTGATCAAGAAGATCTTCTTCCAAAGGTTATTTGCACCAACTGTTACGAATGTCTGGTAAAATTCTGGGATTTTCGAAAATTGGCTGAGAAAATAGATAGCCAGTTACGATTTCAGTTTGGAAACGGTTCAGTCAACACAGTTGATGTAAAAATTGAAATTGACGACAACATTGCAGATTTTAGTACTTGTGACACGGATTTCGTAGACACAGAAACAAAGTATGAATTTAATATTGATACTAATGTTCCAATCGATGAATCTGAGGCACTGGCTGATAAAACATACAAATGCAAAGTTTGTTCAAAAGAATTCGAAAACTCTTACAAATTGGAACAACATTACCACTTAATATGCAAAAATATTCAATATGAATGTGATATCTGCAATAAAAAATTCAAAAAAGAATCTAAACTTGACAAACATAAGTTACGGCACAACAAAACATTGTATACTTGTACATTATGCCCCGAAACGTTTAAACACCATTTCAAGTACGTCAAACATTTAGTCACGCATAGTAAGAATGTTTACAGACAATGTATGACGGAATTAAACCAAAATAAAACTGACCAAAGTGTAAAATGTGATAAATGTTCCAATAATTTTAAGTCTATGCATGCTCTTGCTGCGCATATGAAAGTACATACGAAAAAGGACCGGGTATTATCCTGTTCTATATGTCATAAAGTATTTAAGAAAACAAGTCATCTGAAAAGGCATGAGATGTGTCATGAAGATAATAAGCCGTATAAATGTACGTTGTGCGGTAAGGCTTTTATTACCGAAAGTATACTTGCTGAACACATGAATAAACACAACGGTGTTAAGCCACAAGTGTGTCCTATTTGTACAAAGTCATTTACTCACATGTCTACATTGACTACGCATATAAAGATACATACCAGAGAGAAGCCATATTTATGTCCGACTTGTGGAAAAAAGTTTGATTCCAGTACGAATTTGAATCAACATATTAAACGGCATCTTGGGCTGAAATGTTTTGCTTGCAGTTCTTGTCCGAAAACTTTTGTTAGTAAAGGGGAGCTGAAATCTCACAGCCTGACTCACACCGGCGAGCGATCTTTTGCTTGCGAGGCTTGCGGCTCCAAGTTTACCAAGAAGAGCTCCCTGTTGAAACATTCCTTGATACATTTGGGGGTCAAGCCATATCAGTGTGAAAAGTGCCCTATGAAGTTCGCAAGCAAGTACCACTTGAAGCGTCACAATCGCATGCACACCGGCGAGAAACCCTACCGCTGTGAAGTGTGTGAGAGAGGGTTCACTCAGAGCAACGATCTGGCCAAACATCGCAGGTCACATCTGGGAGACAAGATATACAGATGTACCCAATGCACGGAAAGCTTCCGTCTGATGACCGAACTACGCCAACACATATCCGAACACTTTATATCAGACAAACTTCAATCTCTATCCGTAAATAAACACACGACTCAATCCATTGAAAATCAAACTTTGGACAAAAATGTCAATCTAAATAACAATATGGTGCGAAATTCTGGTATTAATGTAGTCATCGTTACTAATGATGGTTTCAGATCGTCTCTTACTAATGACGTCATCGATCCTAATGTTAGAAGCGTTAGTGACGTCATACCGTCTGATGTTAGAAGCGTTAGTGATGTCATTACTTCTGATGTTAGAAGAGTAAGTGACGTCATTACTTCTGATGTAAGGGTTATGGATAATTTATCAAATAATCATGTAAATAATGTGGAAGAAATGACTGGTGTCAATATGGTTCAAGTAACTAAAGTTTGTGGAGTAGCTAATGAATTATAG
Protein Sequence: MAMAHLLDQNKLNGRCRTCLSDCSGQMYDIFAGSINSTSPVDILRSCTYVMIDQEDLLPKVICTNCYECLVKFWDFRKLAEKIDSQLRFQFGNGSVNTVDVKIEIDDNIADFSTCDTDFVDTETKYEFNIDTNVPIDESEALADKTYKCKVCSKEFENSYKLEQHYHLICKNIQYECDICNKKFKKESKLDKHKLRHNKTLYTCTLCPETFKHHFKYVKHLVTHSKNVYRQCMTELNQNKTDQSVKCDKCSNNFKSMHALAAHMKVHTKKDRVLSCSICHKVFKKTSHLKRHEMCHEDNKPYKCTLCGKAFITESILAEHMNKHNGVKPQVCPICTKSFTHMSTLTTHIKIHTREKPYLCPTCGKKFDSSTNLNQHIKRHLGLKCFACSSCPKTFVSKGELKSHSLTHTGERSFACEACGSKFTKKSSLLKHSLIHLGVKPYQCEKCPMKFASKYHLKRHNRMHTGEKPYRCEVCERGFTQSNDLAKHRRSHLGDKIYRCTQCTESFRLMTELRQHISEHFISDKLQSLSVNKHTTQSIENQTLDKNVNLNNNMVRNSGINVVIVTNDGFRSSLTNDVIDPNVRSVSDVIPSDVRSVSDVITSDVRRVSDVITSDVRVMDNLSNNHVNNVEEMTGVNMVQVTKVCGVANEL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -