Epin013040.2
Basic Information
- Insect
- Euzophera pinguis
- Gene Symbol
- -
- Assembly
- GCA_947363495.1
- Location
- OX376159.1:13023558-13032623[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 23 0.011 0.84 10.8 0.9 3 23 648 669 647 669 0.94 2 23 0.048 3.8 8.8 0.6 1 22 1050 1071 1050 1071 0.95 3 23 7.3 5.7e+02 1.9 0.3 1 22 1113 1134 1113 1136 0.82 4 23 0.0084 0.66 11.2 0.6 3 21 1147 1165 1146 1166 0.95 5 23 0.48 37 5.6 0.2 2 23 1174 1196 1173 1196 0.90 6 23 0.0038 0.3 12.3 0.1 3 23 1217 1238 1215 1238 0.96 7 23 0.015 1.2 10.4 1.4 1 23 1244 1267 1244 1267 0.95 8 23 0.14 11 7.4 0.0 1 23 1289 1312 1289 1312 0.90 9 23 0.02 1.6 10.0 3.4 1 23 1317 1339 1317 1339 0.97 10 23 0.0071 0.55 11.4 0.2 1 23 1345 1368 1345 1368 0.95 11 23 0.0025 0.2 12.8 1.3 1 23 1384 1406 1384 1406 0.97 12 23 0.00019 0.015 16.3 1.8 1 23 1454 1477 1454 1477 0.97 13 23 0.0012 0.098 13.8 1.6 1 23 1538 1561 1538 1561 0.96 14 23 0.0012 0.094 13.8 2.1 2 23 1590 1612 1589 1612 0.95 15 23 0.095 7.4 7.9 0.1 2 23 1618 1640 1617 1640 0.93 16 23 0.011 0.84 10.8 0.2 1 21 1684 1704 1684 1705 0.95 17 23 0.0013 0.1 13.7 0.6 1 23 1715 1737 1715 1737 0.93 18 23 8.8e-05 0.0068 17.4 0.3 2 23 1833 1855 1833 1855 0.93 19 23 1.9e-07 1.5e-05 25.8 1.1 3 23 1862 1882 1861 1882 0.98 20 23 0.0023 0.18 13.0 0.8 1 23 1899 1921 1899 1922 0.94 21 23 0.2 16 6.8 0.0 1 23 1943 1965 1943 1965 0.97 22 23 0.03 2.3 9.4 0.6 1 23 1971 1994 1971 1994 0.95 23 23 0.00016 0.012 16.6 0.5 1 23 2002 2025 2002 2025 0.97
Sequence Information
- Coding Sequence
- ATGAGTGTGAATTATGATCGTGTTTGTAGACTGTGCTTGTCATCCCGAGGCGAATTACTGCCGATTTTTCCTACCACCAGTTCGGATGACACGGAATCTCCCGTCATCGCCAGGAAAATCAAGGATTGCGTCTCTGTACAGATATGCGAAAACGACGATCTGCCAACCAATGTCTGCAGAAAATGCATGGACAATGTGAATAACTGGCACATATTTAAGACAGTATGTGAAAGGACACAAAACAAACTAGAATCTCTGTTAAAAAAAGATGGCAACCAACTAGAAGAGGTGAAAATCAAAAGTGAGCCATTATATGATGAGGCATATGATGATGGAGTTGTTATTGATGGGTCATACCCGGATGGTGAGAATGCCAGCAGTTCTAGTAAGATACAGCCAGAAGGCCCACCAATCTTGGCTTCGTTGGGACTTACACCAAGAAGTGATAAGAAATATATAGATCCTCGAATGGACTGGGCTCGCGTACATGCAATCTTGGACTTAGTGCAAGAGGATGAAGTCATAGATTCCTTGCAGAATACAGAAGAGAGTGATATTGTATATCATTCAGATCATGATTCTGACGTGATTGACCTCAAACATGATATTGCCGACATTTACATTGATTGCAAATCTGGATATTTATGCAAGGATGAGAAAATCCTTTCTAGAACGCCCAAATATTCTCTCTTAACTAGAATGGAAAGAATGAAAGAAGTCAGTGTTTTAAGAAAACGGAAAGTAGATCAGCTAACATTCTGCCCTCAACCCAATTTAGCGTGGCAGAAATTTTTCTCAGAGGATCTATTGGAGCTAATTGTGATGTCAACAAATCGTACTATAGAAAAACGTGGACACAGTATTTCACTGTGTACAAACACAAGTGAAATAAAAACATTGATTGGTGTATTGTACCTTCATGGTATATTACGACCTACTCAACAGAAATTTAGTGATCTATGGAGCAGCACTTGTGGTGTTCCGTGTATTAGAAATGCTATAAAATATGAACAAGTTAAATTCCTTCTGCAAAATATTTGTTTTGATAAAGATGCAGATGAGGATATTATGCAATTTGACATTATGAGACGAATACGGAAAGTTTTTGAAATATTTGCATTAAACTGCAGGACAGCATACCATGCAACTGGAAACTCTTTGGTTATTGACGAAATCCTTGTACCAGTTTATGGTCCTTGCCCATTCAGATATAATATTGATAACAAACCAATAAATAATGGTATGAAATTAGTGTTGTTAGTTGACCCCTTTACATTTTATATAAATAATTTAGATGTTGTAACTGATCCGCATTTTAGATCTGCAGACATTGTTATGAAGCTAGTTCAACACCTGGCTGGTACCTGGAAGACCATAACAATGAACAGCTGGTATATGTCAATGCCCTTGATCAATTATTTAAAGAATGAGTATGAGTTGTTTGCTCTAGCAGCAGTCAGCCCAAAGGACGATATAATACCGCCATTGTTTTTATCAGAGTACAGGAAAAATCAGAAATTATTGACGGGTTTCATGGATGATGATATTATACTTACTTCTTTTGTTACTATGGAATCCAAATGTATAAATATTGTTAGTAATGAACCACAATATAATAGAAAAGGGCATACAAAAATGAAAAGTGCATCAGCTGCATATTTAAAATCCAAATCTGCTGTAGAAGTGATTGATGTTCTAATGAATTACTATACTACAATGCAGAATACAAATGACTGGACTCTATCTTTATTTTTCACATTACTTAACATAGCAGCAGGTGTGGAAAGTGAGAAGGAGGAAATGGAAGAAGATGAAGAGATGAACGAAGGTCAGTCGTTCTCCAACGTGCCTTCCATGCCCGAGGTATCGATCACAGTGATGCGCCCCACCGGCGAGACATTGCACGCGCGACAGGGCATCCAGGCACTCGCTTCCAAGGACTGCCTCGTCTGCGGCCGCTCCTACAGATACTCCCACAATGCTAGGCGACACGAACTCTCAGCTCACAACTTTGACAGGTACACTAACAAAGTATCACACAAAAAGTCTTTCGCACACATGCAACCTAAACTGAGACCGAACCCGTTCAACCCGAAGGCCCGGTTAATGCCGAGCCACAAAATGCACCTTGTACCTAAACCGGTCCCTAAGTTAATGCCGCACAAAATTGTAAACCCCCCACAACCAGTTCTAATTAAAAAAGGACCACAAAACAATTTACCATATCCTCTTCGCATCAAGGCGTTGAAAGACTTACAAATAAAGAAAAGAGAACCGCAAATGCTCAAAACTTTACTCACGTTGAAACCGGAGATTTTAACCTCTGAGATTGACATAGCAAATTCCGAACCAGAAAGTCCTGAGACATTGGTATCTGAACCTGAAATAGCTTCTTTCCAAGTAGAGGCTATACTATCTGAACCGGATGCATTTGACCAGCCGCAAGGCGAAGAAGACTGCGAAGGTGAAGGGGATGGAGATGAAAATAATCATAATCAGAATTATGACACTGTCGATATGGACTCGGAAAATGAAATTGAAATAGCTCGACAGCAAGAGAATGAGGTGGAAACTGAAGAGCACAATTTAGAGAATGACAATGATGATAACATGCATGATGATGACGAGAATGTTGAAGCAGCCCCTAGCGAGACTGAGAAAGAACATCTTGAAGAAAATGGTGAACATGAGGATATTGCAGAAAGGGAAGACAATATTGAAAACAAAGTGGAAGGAGAAAGTGGAGATATGGAGGGAGAGGATGATAGAGAACACGAGAAACAAGAAGAGAACCATGATGAAAATGAAGAGGATGATGATGACATGCCTCCCATCAGTTTGGCCCCTGTCGTTGAGATAAATGAGGACTTGCAAACCAATTCATTCAATAGCGAGTTAAACGAAGAAGAGGAAATAGACGAGACTGCCGACGATACTGCTGATCTCAATGAAACTGAAGAAGAACCTGTTAAAGAGTTAGATCCTAATAAACTTTATGTGACTAAAACTCAAAGAGATTTTATTGACAAATATAAGGACATTATTCAACAGATCAATACAAAAGTATGTCTTTGCTGTGACCGGGAACACCCACGTCGAAAAGCTGTCATACAACATTTGCAGAAAAATGGACACAAAGTACCTAAACATACATGTTATAATTGTGTGGTCACCTTTTCACATATTGGTGCTCTGCTAAGCCACATGAGATCAAACACGTGTACCGATTTGTGGAAGATTATCTACAACGAAAATGGCATTACAGATGACTTGGTTCTAGATGACGAACCCAAGGAAGCCAAAGTTCAATACAAAGATATCTTTAATGCGAGATCATACGCTTGCAAGCTGTGCCCTGCTAAATTCCAATTGAAACAATTTATTATGAAGCATGTGTTAGATGTTCATGAAGATGGCCAGTCTCGAGTTCCGAATATATGTGTCCACTGTGGGGCAAGGTTTAAGGAAAGAAGTTCTATTAAGAAACATATACGTAATGGAGATTGCACAGTGTACATTTCTTGTGACTTATGTTCGGAAAAGTTTTCAAACATGCAGACTTTCAGTGAGCATGCAATGGCTATACACGCCGGAAGTTTCGATCAGAATGAAAGCCAGAGTAAATGCCTGGATGGCCGGCCGACAGATTGTCCAATTTGTGGAAAGAAGAATAGTAGTTATCCTAATCTGATAAAACATTTGAAAATCATACATAATGAGGAAAAGCCGCATTATTGCAAACACTGCGACGAAAAATTTGAGCTAGCTGCTGATCTAGATCAGCACATTTATTCAGTTCATACCGACAGAGGCGTGACAGAGCCCGACATGTCGCTTGTGAAAGAAGAAGCCGAAGAATATCATTATTCTTGCACGGAATGTAATGCGATTTTCGAAACGGTTGACGCCTGGACCGATCATCAGGTAGCCGAGCATAACCAAGTGGCGCACCACTGTGATCAGTGCGAGAAAAAGTTCTTACGACCCTCGGAACTTGCCGAACACAAAAATACTCATTTGCGCGTAAAATTCTATCCATGCAATATATGCAGTAATTCATATAGTACGCCTCAAAAGCTGTCAGAGCATGTGCAACAAGTCCACCCAGGAGTTGGATCTGGTGTAGCATTACATGGTATGGAGAATGAGTTCTTCTGCGATATTTGTATAAGATCCTTTAAGAGTCGCCAAGCGTACTCGAACCATATGCGTATTCACGCCAAAGTACCCACAACGAATAGAAAACCTGGTGACCCTAAAGGGTTTTCACCACAAATTATTGGCAAACCTATCAAGCAGTTCCCAACTATTCAAGCGAACTTTGTTTATAAGCCAAATTGTAATGTTCCTAATGCTCCATATTCGTGTGATATTTGTGGCAAAGGCTTTATGCACAAGAAAAATATATGGAAACATAAGAAGGTGCTACATGCTGATATACTCAATGATAGGAATGACAGTGAAGAAAATACAATGCAAGCTTCTACGGAAGAAGACGATTACAATGTAGACGAAAATGGTGCCCTTTTGTCAACACCACAATTCAATAGTTTTAATTTTGCAAACTTTGCCAATAATGTTCAACAGACGCCTCAGGAGGATCCAATGCCCTACTCTTGCGAACTTTGTTTTAAGAGATTCCCACTTAGATCGAGTTTGTGGAAACATAAACGTGCCAAACACGGAATCATCAATGCAAGTGCTAGTGGTGGGGAGGCAATGAGTTCACCGGTAGTTGCTCAACAGTCTGAAGGAAGCAGCAGGTCCAGTTGCACAATTTGTAAGATTACATTCTCTGACAAGAAATCTTATTATCGCCATAGAAAGAATGTCCATAAAACTGCAACACAAATGTGTAAAATATGTGGCAAACCATTGAATTCAACATTAGAACTTTATGAGCATTTGAAAGCTGCACACGCTCGCGAACTGTTAGGATACAATGCTAGTCAAGGGTCTAGTAAACCTCAGGAAATGAAACAGGAATTAGAAGCCGACTATGAGAACGACCAAGATTCAATCGATCCTACAGTAGACTACCAAGCACGCTATCCTTGCGACACGTGCGGCAAGCAATTCGTCGGATTATTAGCTTTACAGAACCATCAATGCATAAATCAAGTTCAATCACAACCGCAGACTTTCGACTGTGAGATTTGCCACAAGAGTTACACCTCTATCGCGGCATTGAAAAGCCACCGCGGTTGGCATTTGCGTTCTCCTGACGGCAAAGCGGCCGCTAATAACTCTGGACTGTGGATGCCGCAGAACAAGGTGACCAACAAGGTCAGCAAGCACGAGGTGGTGGACCCGGTTCAATTGGCGCGCGTCACGCACACCACGTCCACTCCCACACCCGCCGCTACCGCTCCCTCGCTTGCTGCCAAAAGAAGACTGCCGCCCGAGGTAGAGGTCACTGTCGTTAACCCCAACAAGAAAATGCGTTCCGACGACTCCATAGAACTGGAGCAGCAGAGCGGCGCGATGGAGGACAGATATTGCACCATCTGCGACAAAGAGTTCACGAAGCGAGCGGCGTACCAACGGCATATGGAAGAGGTTCACATGCCGAACTCCGTATTTTGTCCCGTGTGCGATAAGAGTTTCACGAGGAAGTCCACTCTGATCGTTCACATGAAGAAGCATTACGAGGGCGGTCAAGGCGGTTCGAGCGGGAACCAGGCGGAGGACGAGTTCGCGTGCGACGTTTGCGGCACGCAGTTCGACAGCGAGACCGCGCTGCGGACGCACAAGGCGAGACATCACGGCGAGGACGAGTCGGAGGAGTCTGAGGACGACGGTGCGCGCGCGCCGCCGCCCGGGGAGTTCACGTGCGCGCAGTGCGGCGACGGTGTGGCAACGCCGCGCGACCTCATCGCCCACAGAACCATGCACGCGACGCCCACCAAGTTCTTCTGCAACATTTGTAAAGTGTACTTCGCCCGAGCGTTGGACCTCTCGTCGCACACTCGTGCGCGACACGCCGATAACGAGAAAGTGTTTTTCCCTTGTGCCATGTGTGATCGCTTCTACATGAATAAGAAGAGTTTGCAACGACACATCGAGACGGCCCATTGA
- Protein Sequence
- MSVNYDRVCRLCLSSRGELLPIFPTTSSDDTESPVIARKIKDCVSVQICENDDLPTNVCRKCMDNVNNWHIFKTVCERTQNKLESLLKKDGNQLEEVKIKSEPLYDEAYDDGVVIDGSYPDGENASSSSKIQPEGPPILASLGLTPRSDKKYIDPRMDWARVHAILDLVQEDEVIDSLQNTEESDIVYHSDHDSDVIDLKHDIADIYIDCKSGYLCKDEKILSRTPKYSLLTRMERMKEVSVLRKRKVDQLTFCPQPNLAWQKFFSEDLLELIVMSTNRTIEKRGHSISLCTNTSEIKTLIGVLYLHGILRPTQQKFSDLWSSTCGVPCIRNAIKYEQVKFLLQNICFDKDADEDIMQFDIMRRIRKVFEIFALNCRTAYHATGNSLVIDEILVPVYGPCPFRYNIDNKPINNGMKLVLLVDPFTFYINNLDVVTDPHFRSADIVMKLVQHLAGTWKTITMNSWYMSMPLINYLKNEYELFALAAVSPKDDIIPPLFLSEYRKNQKLLTGFMDDDIILTSFVTMESKCINIVSNEPQYNRKGHTKMKSASAAYLKSKSAVEVIDVLMNYYTTMQNTNDWTLSLFFTLLNIAAGVESEKEEMEEDEEMNEGQSFSNVPSMPEVSITVMRPTGETLHARQGIQALASKDCLVCGRSYRYSHNARRHELSAHNFDRYTNKVSHKKSFAHMQPKLRPNPFNPKARLMPSHKMHLVPKPVPKLMPHKIVNPPQPVLIKKGPQNNLPYPLRIKALKDLQIKKREPQMLKTLLTLKPEILTSEIDIANSEPESPETLVSEPEIASFQVEAILSEPDAFDQPQGEEDCEGEGDGDENNHNQNYDTVDMDSENEIEIARQQENEVETEEHNLENDNDDNMHDDDENVEAAPSETEKEHLEENGEHEDIAEREDNIENKVEGESGDMEGEDDREHEKQEENHDENEEDDDDMPPISLAPVVEINEDLQTNSFNSELNEEEEIDETADDTADLNETEEEPVKELDPNKLYVTKTQRDFIDKYKDIIQQINTKVCLCCDREHPRRKAVIQHLQKNGHKVPKHTCYNCVVTFSHIGALLSHMRSNTCTDLWKIIYNENGITDDLVLDDEPKEAKVQYKDIFNARSYACKLCPAKFQLKQFIMKHVLDVHEDGQSRVPNICVHCGARFKERSSIKKHIRNGDCTVYISCDLCSEKFSNMQTFSEHAMAIHAGSFDQNESQSKCLDGRPTDCPICGKKNSSYPNLIKHLKIIHNEEKPHYCKHCDEKFELAADLDQHIYSVHTDRGVTEPDMSLVKEEAEEYHYSCTECNAIFETVDAWTDHQVAEHNQVAHHCDQCEKKFLRPSELAEHKNTHLRVKFYPCNICSNSYSTPQKLSEHVQQVHPGVGSGVALHGMENEFFCDICIRSFKSRQAYSNHMRIHAKVPTTNRKPGDPKGFSPQIIGKPIKQFPTIQANFVYKPNCNVPNAPYSCDICGKGFMHKKNIWKHKKVLHADILNDRNDSEENTMQASTEEDDYNVDENGALLSTPQFNSFNFANFANNVQQTPQEDPMPYSCELCFKRFPLRSSLWKHKRAKHGIINASASGGEAMSSPVVAQQSEGSSRSSCTICKITFSDKKSYYRHRKNVHKTATQMCKICGKPLNSTLELYEHLKAAHARELLGYNASQGSSKPQEMKQELEADYENDQDSIDPTVDYQARYPCDTCGKQFVGLLALQNHQCINQVQSQPQTFDCEICHKSYTSIAALKSHRGWHLRSPDGKAAANNSGLWMPQNKVTNKVSKHEVVDPVQLARVTHTTSTPTPAATAPSLAAKRRLPPEVEVTVVNPNKKMRSDDSIELEQQSGAMEDRYCTICDKEFTKRAAYQRHMEEVHMPNSVFCPVCDKSFTRKSTLIVHMKKHYEGGQGGSSGNQAEDEFACDVCGTQFDSETALRTHKARHHGEDESEESEDDGARAPPPGEFTCAQCGDGVATPRDLIAHRTMHATPTKFFCNICKVYFARALDLSSHTRARHADNEKVFFPCAMCDRFYMNKKSLQRHIETAH
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00012228;
- 90% Identity
- -
- 80% Identity
- -