Epin017641.1
Basic Information
- Insect
- Euzophera pinguis
- Gene Symbol
- -
- Assembly
- GCA_947363495.1
- Location
- OX376154.1:22287162-22298450[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 35 0.004 0.31 12.2 3.5 1 23 42 64 42 64 0.98 2 35 0.0042 0.32 12.1 3.8 2 23 135 157 134 157 0.96 3 35 0.00012 0.0094 17.0 0.4 1 23 162 185 162 185 0.98 4 35 0.0023 0.18 12.9 2.6 1 23 190 213 190 213 0.97 5 35 0.00035 0.027 15.5 1.9 2 23 216 238 216 238 0.95 6 35 0.0027 0.21 12.7 0.6 2 22 245 265 244 265 0.95 7 35 0.055 4.3 8.6 1.2 1 23 322 345 322 345 0.93 8 35 0.37 29 6.0 0.1 2 23 373 395 372 395 0.93 9 35 0.43 34 5.8 0.1 3 23 419 441 418 441 0.94 10 35 0.0029 0.22 12.6 0.4 3 23 448 469 446 469 0.94 11 35 0.04 3.1 9.0 0.8 1 20 474 493 474 497 0.91 12 35 0.26 21 6.5 0.2 2 23 503 525 502 525 0.90 13 35 0.015 1.2 10.4 3.7 2 23 530 552 529 552 0.97 14 35 0.0034 0.27 12.4 1.8 2 23 559 580 558 580 0.96 15 35 0.039 3 9.1 2.0 1 23 629 651 629 651 0.95 16 35 0.84 66 4.9 0.0 3 21 680 698 678 701 0.86 17 35 0.56 44 5.4 1.9 1 23 721 744 721 744 0.95 18 35 8.6e-06 0.00068 20.6 0.2 1 23 749 772 749 772 0.96 19 35 0.00012 0.0092 17.0 0.8 1 23 777 800 777 800 0.98 20 35 0.00033 0.026 15.6 1.9 2 23 803 825 803 825 0.97 21 35 0.15 12 7.2 1.3 2 21 832 851 831 852 0.94 22 35 0.0054 0.42 11.8 1.5 1 23 909 932 909 932 0.93 23 35 0.12 9.7 7.5 0.0 2 23 1005 1028 1004 1028 0.93 24 35 9.5e-05 0.0074 17.3 0.7 3 23 1035 1056 1034 1056 0.94 25 35 0.0032 0.25 12.5 2.5 2 23 1061 1083 1060 1083 0.94 26 35 0.98 76 4.7 4.1 1 23 1130 1153 1130 1153 0.96 27 35 1.9 1.5e+02 3.8 0.0 2 23 1181 1204 1180 1204 0.92 28 35 0.029 2.3 9.5 0.1 2 23 1227 1249 1226 1249 0.96 29 35 0.0068 0.53 11.5 0.0 1 20 1254 1273 1254 1274 0.96 30 35 0.003 0.23 12.6 1.6 1 23 1280 1303 1280 1303 0.93 31 35 0.35 28 6.1 0.7 1 23 1309 1332 1309 1332 0.93 32 35 0.0082 0.64 11.2 1.3 2 23 1340 1362 1339 1362 0.94 33 35 1.4 1.1e+02 4.2 0.5 1 23 1367 1389 1367 1389 0.96 34 35 9e-07 7e-05 23.7 0.8 1 23 1395 1417 1395 1417 0.98 35 35 3.5 2.7e+02 2.9 0.2 2 19 1424 1441 1424 1446 0.90
Sequence Information
- Coding Sequence
- ATGACCAAAATGGATAAAAACGCGCCGGCGCGTAATGACGGCCCCGCATCCGAACGTCGGAGGAATAATTTACAAATATTGTTCAACAACACTACAATATTTCCGTTCAAATGGCGAAGCAATTTTCAATGTTTCTACTGCGCAAAACCTTACAAAGAATACTCGGAGTTCAAAAAACACACTAAATCACACGGGCAATGCACTACGAAAGATCATTCGTTGAGAAATATTACCGGAAATCATATTGAAATCAAAATAGACGTATCAGAAATTAATTGTAATATTTGCGACGATCCTTACAATGATGTAGAGAGCGTCATAGAACATCTTATTGATAATCATGACATGAAATACAATAAAGACGTGGATGTACCCTACCAGGCATACAGGCTTCAAGACTTGAAATGTTTGCATTGTGATCAACGCTTCTCCTATTTCGGTTACTTGATACATCATGTCAATACATCGCATCCACAGGACAATTACGTTTGCGTCGAGTGTGGGGCTAATTTTAATAAAAAGAGATATCTATCGTTGCATATGAGGAGTGACCATCGTAAGGAAGGCTATAATTGTGATCAATGCCAATTAAAATTTATTACTTACCACTTATTGCGGAGCCATCAACAGAGTGCGCATTTTAGGAAATGTAAAAATTGCGATCTATGTTTCGATTCTCAGGTACTACTAAGAAAGCATATACAAGCTGATCATCCAGAAGATGGAAATGTGAAATGTTTGTATTGCGGTAGGAAATGTCGCAACACAGACGGTCTGGCTGTACATATAAGAAAGTGTCGATTTAAACTTGAAAAACAGAAGCCGGACGATGTCTTGTTACCTCAGAATAATGTTCCAATGGTTGCCAAATCTAAGAAAAATACTAATCTAATGCAAATTAGGCGAAACATACAAAGCGTTCTTAACATGTCCACGGCAGTGCCTTTTAGTTTCTTTAATAGATTTTCTTGTTTCTATTGTTCGAGGAAGTTCGGTGAATTCGATAGTTTGAAAGAACATACTATTCTGGAACATCCAATATGTGATATTAAATCGAAATCAATGATGACATTCAAAGGAAATAATCTAAGCGTCAAGGTGGATATAAGTTCTCTGTCTTGTAAAGTATGTTCACAATCTATGTCCGACTTGGATACTTTGATCGAGCACCTGGTATCAGAGCATAAAGTCAATTACGACAAGTCTCTGCGTAATTGCTTAGAGCCTTACAAGATAGGCAAGGACGGCGTGGCTTGTCCGCTGTGCCCTCAACAGATATTCAGTTTCTTCGGCAGTCTACTCAGACACATAAACAGTTCACATAATGACAACAATATTATTTGCGTCTTTTGTGGGATGTCTTTTAGAACTGAAACGAATATGCGTTCTCATGTGTCTCGGCTCCATAATCGCGATGGATACAAATGTGTAGTCTGCAATCTTGTGTTCCATTCGAGGGACTCTATGCAGTCGCACTCCGGTAACGTGCACGGTACCAAGATATCCAAATGTCCGCAGTGTTTAGAAGCATTCTCCTCCAAAAATATAATGAGGAGGCATTTGATAGACGCCCATGGTACAGGACAGAAGTGTCCCCATTGCGGGAAACTGTTTCCAAAAAAATGCTTGATGCTCGACCACGTGCGCAGCACTCACTTGAAAGAGAGGAACGTGCAGTGCAACATGTGCCAACAGAAGTTTTTCAATGAACGCCTTCTGAAAAAACACTTGGTAAAACATTTCGGAGAACGGAACTTTCACTGCGATGTTTGTGATGAATACGCACCTGGCCCTTACGATGGCTGCGCGTCTGAACGCAGAAGGAAAAACTTAAGAATCCTCTTCAACAACACGACTATAATCCCGTTCAAATGGCGGGGCAAGTTCCTCTGTTTCTACTGCGCCAAAAGCTACTCAGAGTACCCCGAATTCAGAAAGCACACCAAATCACACGGGCCGTGCACTACCAAGGATTACGCTCTGAAAGTAATCAAAGGCAATCACATTGAAATCAAGGTGGACGTTTCGGAAATTATTTGCGATATCTGTAACGAACCTTTCGGTAATATGTCTGAAATTGTCGACCATCTTGTCGGTAAGCATAACATGGAGTACGATAAGAGCGTAGACATTCCGTTCCAAGCCTACAGGTTGACAGATTTCAAATGCCTGTGTTGTGACCAGCAGTTCTCGTATTTCGGCAGCCTTGTTAGTCATGTTAATATCATGCACCCTCAGAACAGTTTTATCTGCGACGACTGTGGCGCCACTTTTAACAAAAAGAGAGACTTGGCCGTGCACATGAGGAATCTTCATCGCCAGGGCGGGTACCCTTGCGATCAGTGTACGGAGAACTTCGACACTTATTATTCACTTCGTACACATCAGAACACGGCGCATTTCAGGAAATGTAAAAATTGTAGCTTGCATTTCATTTCGCCGGCACTGTTGCAAAAGCATATGAAGTCTGAACATCCAGAGGACGGAAATGTCAAGTGTTCGTTTTGCGGCAAGGAGTGCCACTCGACCAACGGTCTGGCCCAGCATATGGCCCGGTGTAAAGTCAAACTCATCGCGCAACCCGACGACCCGCCCGTTTTCGACTCCTTCCCCACAGACGTCGGAATAAAACCGAAGAAAAAGCAGAATATATTACAGATCAGACAGAACATACAGTGCGTACTCAACATGTCCACCGCCATACCATTTAAATTCTTTTCGAAATTTTCTTGCTTTTACTGCTCAAAAAAGTTTACAGAATTCGAAGAGTTGAAAGAGCACACTATATTGGAACATCCGGTGTGCGAACTCAAATCTAAATGCATGAAGAAATGTAAAGGTGAAAGAATTACTGTCAAAATAGATATCGCGTGCTTATCTTGTAAACTATGTTCGCAGCCTATGTCGGAGTTGGACGCTCTGATAGACCATTTGATATTAGAACATAAAGCTAATTACGATAAGTCATTCACTCGTTGTTTCGAGCCGTTCAAGATTATTAAAGACAATCTTCCCTGCCCCGTGTGTCCCGAGCGAGTGTTCAGATATTTCGCGACGCTGTTGAAACATCTGAACGCCGAGCACAGCAACAACAACAGGATATGCGATTTTTGCGGCCGTTGCTTCCGAAACGTGGCCAATTTAAAAGTCCACATATCATACGCGCACACGGGTTGTTGCGAATGCACTATTTGCGGAGCGAAATATAAAAACCAGTGGTGTCTAGCCCGTCACAGAGCTAAagttcacaacgcgaaggactacgggtGGATAAGAATAAACGAAGAATCGGACAACTGTATGAAACGGCTGTGTAGCATTCGGACCAATATTCTCGCCGTGCTACGATACGGGAACGTTATACCTTTCAACTGGAACACCAAAGGCTTCCGTTGCTTCTACTGCTCAAAAGTCATCGCCGACTGCACTGAGATAAAGAAACACACCACAAAGAAACATAAAAACGTTGACTTAGCCACTTTTATCCCAAAAAGAATCATAACTAAAGATGTACCTGTAAAAATTGACGTAACTGACATAAGTTGTCAGATATGTGATAACATGCCCGTGAATAATCTAGATGACTTGATATCGCATATTATGATCGTACACGAAGAAAACTACAATCTGTCTGCTGGGGTTTGCATGTTCCCTTTCATACTCAAGAAAGAAATGATGTCCTGTGTCATCTGTGACGTTCTGTTCGATAATTTTCCCAATCTCGTCAGTCACATGAATAGGGAACACATAGAACACAGTTACATATGTCAAGTGTGTGGTGTGAGCTTCATAGATTATATACGTCTCAAAAGACACATAACCTGTAGCCACGTAGGTCATCGTTGTGCGATTTGCAAGAAAATGTTTCCAACCGTTCGTAAATTGGAAAGGCATAAAGTGAGAATTCACGGACAAATCAAAAGGCACGATTGTAGTTTGTGCAGCGCGTCTTTTGAAAGTGATTATAAAGTTAAAGTGCATATGGGGAAGGTTCACAATGTCGAGAAGTATTTAATAAGGTGCGAGCATTGCCCTAAAGTGTGTAACACCAAAGGTGCGATGATGCTGCACGTGCAGTTGTTACATTCAGACGTTAGGTACGAATGCGATCTTTGCGATTATAAAACGGGTATAAAATGGATGATAACGTTGCACAAACGGAAGCACAACGGCGAGAGGAACTATGCGTGTAGCATCTGTGAGAGAAAGTTTGGAAGGTCCAGTAATCTACGAACGCATATGAAAGTACATACAGGACAATTTGGTCGTGTTTGTCGCCATTGCAGGCTGGGATTCGTCGATGTTGGCGCGCTGAATGACCACGATCGTGATGTGCACTATACTGATCAAATTTAA
- Protein Sequence
- MTKMDKNAPARNDGPASERRRNNLQILFNNTTIFPFKWRSNFQCFYCAKPYKEYSEFKKHTKSHGQCTTKDHSLRNITGNHIEIKIDVSEINCNICDDPYNDVESVIEHLIDNHDMKYNKDVDVPYQAYRLQDLKCLHCDQRFSYFGYLIHHVNTSHPQDNYVCVECGANFNKKRYLSLHMRSDHRKEGYNCDQCQLKFITYHLLRSHQQSAHFRKCKNCDLCFDSQVLLRKHIQADHPEDGNVKCLYCGRKCRNTDGLAVHIRKCRFKLEKQKPDDVLLPQNNVPMVAKSKKNTNLMQIRRNIQSVLNMSTAVPFSFFNRFSCFYCSRKFGEFDSLKEHTILEHPICDIKSKSMMTFKGNNLSVKVDISSLSCKVCSQSMSDLDTLIEHLVSEHKVNYDKSLRNCLEPYKIGKDGVACPLCPQQIFSFFGSLLRHINSSHNDNNIICVFCGMSFRTETNMRSHVSRLHNRDGYKCVVCNLVFHSRDSMQSHSGNVHGTKISKCPQCLEAFSSKNIMRRHLIDAHGTGQKCPHCGKLFPKKCLMLDHVRSTHLKERNVQCNMCQQKFFNERLLKKHLVKHFGERNFHCDVCDEYAPGPYDGCASERRRKNLRILFNNTTIIPFKWRGKFLCFYCAKSYSEYPEFRKHTKSHGPCTTKDYALKVIKGNHIEIKVDVSEIICDICNEPFGNMSEIVDHLVGKHNMEYDKSVDIPFQAYRLTDFKCLCCDQQFSYFGSLVSHVNIMHPQNSFICDDCGATFNKKRDLAVHMRNLHRQGGYPCDQCTENFDTYYSLRTHQNTAHFRKCKNCSLHFISPALLQKHMKSEHPEDGNVKCSFCGKECHSTNGLAQHMARCKVKLIAQPDDPPVFDSFPTDVGIKPKKKQNILQIRQNIQCVLNMSTAIPFKFFSKFSCFYCSKKFTEFEELKEHTILEHPVCELKSKCMKKCKGERITVKIDIACLSCKLCSQPMSELDALIDHLILEHKANYDKSFTRCFEPFKIIKDNLPCPVCPERVFRYFATLLKHLNAEHSNNNRICDFCGRCFRNVANLKVHISYAHTGCCECTICGAKYKNQWCLARHRAKVHNAKDYGWIRINEESDNCMKRLCSIRTNILAVLRYGNVIPFNWNTKGFRCFYCSKVIADCTEIKKHTTKKHKNVDLATFIPKRIITKDVPVKIDVTDISCQICDNMPVNNLDDLISHIMIVHEENYNLSAGVCMFPFILKKEMMSCVICDVLFDNFPNLVSHMNREHIEHSYICQVCGVSFIDYIRLKRHITCSHVGHRCAICKKMFPTVRKLERHKVRIHGQIKRHDCSLCSASFESDYKVKVHMGKVHNVEKYLIRCEHCPKVCNTKGAMMLHVQLLHSDVRYECDLCDYKTGIKWMITLHKRKHNGERNYACSICERKFGRSSNLRTHMKVHTGQFGRVCRHCRLGFVDVGALNDHDRDVHYTDQI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -