Basic Information

Insect: Euzophera pinguis
Gene Symbol: clz9
Assembly: GCA_947363495.1
Location: OX376154.1:1383870-1386746[-]

Transcription Factor Domain

TF Family: HTH
Domain: HTH_psq domain
PFAM: PF05225
TF Group: Helix-turn-helix
Description: This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 1 5e-07 0.00012 22.3 0.0 1 36 25 61 25 67 0.91

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	1	5e-07	0.00012	22.3	0.0	1	36	25	61	25	67	0.91

Sequence Information

Coding Sequence: ATGGTGCGAACATATCAAAGGAAGAATACCAACACACGCAATGGCAAATCTTATCCACCATATGTAAGGTATTCTGAAGATAATTTGCGAAAAGCAATAGAAGCCGTTCATAGTCGTTCATTGAGATTAAAAGAGGCTGCCGAAAATTACAACATACCGATAAGCACTTTAAGTCGAAAGTGTAGAAATATAAACTGCACGCAAGAAAAAGCGGGACACCCAACTTTATTTTCAAAGGAAGAAGAGAAGTTTTTTATAGACAATGTACAATTACTGAGCCACTGGGGGTTTCCTTTAGATTCAACTGACCTACGAGTGTATGCACAAAAATACTTAAATAAAATTGGAAAAACCATATATGGCCTTGAAGATAACATGCCTGGAGTAGATTGGGCGCGCAATTTTCTAAACAGACACAAAAGTGAGATTTCCAATCGTGCAGCTTCAAATATATCTAGCGATCGCGCTAAAACTACACCACTTGTAATAGATGACTTTTTCGATCATTACGCAAAATCTGTCGAAGGAGTCTCCCCAGACTGTCTCATCAATTATGATGAGACAAATTTGACTGATGATCCGGGTAGCAAAAAATACATTTTCAAGAGAGGGTGTAAATATCCTGAAAGGGTCATTAATAGCTCGAAGTCATCAATTTCTTTGATGTTTGCTGGCACTGCAGATGGACAATCCTTGCCGATATATGTAGTTTATAAAGCAGAACATCTGTGGGATCAATGGCTGGAGGGAGGTCCTGAAGGAACCAGATACAACCGGTCAAAGAGTGGTTGGTTTGATTCAGTATGCTTCGAAGACTGGTTTAATACAGTTATAGTACCGTACGCAAAAAAGAAACCAGGACGAAAAGTTGTAATAGGAGACAACTTATCTTCTCATTTCTCACACTCAGTTCTACAGACTTGCGATGAACTCAATATAATGTTTGTTTGCTTACCGCCAAAGACTACACACCTACTCCAGCCATTGGATGTAGCTTTTTACGCTCCTTTGAAAAAGTATTGGCGTGACGTGTTAACAAAGTGGAAGAAGACAGAAGGATTGAAACACAAGACTTTAGTCAAAAGCTCATTCCCAAGGTTATTAAGCAAATTAAAAAATAAGTTGGTGGAGAATGGCGCGGAATCTACTAACCTAATTGCCGGATTTAACAAATGTGGCTTATACCCCATAAATCCCGAGCGACCCAAGTCGCGGTTGCCTCAAAGACTGATTGTTTCCGAAGAACAGATAGAGAACACAACATCTTCGGTTGTAATAGACATTTTGCAAGAAATGAGAAGCCCTGCAAGTGCCACTGGACAAACAACACGAAAAAGGAAATGCAATGTACCACCAGGAATGAGTATAACAGCAGAGGACATAGTGCGTAATCAGACAGAAAAAGACAAACAGCAACATAAACGGAAAAATACACAAAAGAAAGTGTCGGACAAAAACAAGAATATAAAATCTTTAGACGAAGACAGTAACACCGATTCTGAAATAACAAGAGAAACTGAAAATGAAGAATTGAATCAGGCTGATACGCAGCCAACTGCAGGTCCATCCGGGCTATGTAATGCCTATGCCTTTGACTCTGGTAGCTCAGATGATCAAAGACCACGACACGAAAAGATTACAGAAACTGCTAAGAAACCGGAAATTGAAGAATATATATCGATTAAAGGCAAAGGCAAGGGAAAGAAAAGCAAACCAAAAACAGAAAACAATCACACAAAGATAAGTAAATTGGAAAATACACTATCACTTGAAAAAAATATATCTAGTAAGGGCAAGAAGAGAAAGAAAAATAAATCAAAAATAAAAAAAAGACAGATGAAGATAAGTGATTTGAAAAATTTAGACTTAGACCCAGAGAGTATTGAAAAATTGATAGCCAGTGTTAAAGCAGAGAAATCCAAAAATAAAAAAAACAAGAGATATTCAGACTCTGACACTACAAGTGTGTCAGATATCATGAGCATCCATAGTGACTCGGACATTATAGATATTGATTTCGGTGGATCAATCTCTGATGTCAAGAGCGACGATGAAGACTACGGATGTAATAAAGACATGAGTAACTGTACTTACGGAAAACAGCCAACAGTTGCAGAAATCATTCCAATTCCTGATTATGATGATAAATTTATTGATAGATCATGTGTACCTGAAAGTTCTGTTGAACAAAAGACTGATGGCAACTTAAAGACTAATTATAATACTAAGTTACAATACGTAACTGATAAGACGGGCAACGATCCAAGCAGTACAGCAACGATTTGTGATGATATAGATTTACCTGCACCCGGGATTCCACAAACAGTTGCAGAAATCATTCCAATTCCTGACTATGATGATACATTTATTGATAGATCATGTGTATCTGAAAGTTCTGTTGAACAAAAGACTGAAGGCAACTTAAAGACTAATTATAATACTAAGTTAGAATACGTAACTGATAAGACGGGCAACGATCCATGCAGTTCAGCAAAGCTTTGTGATGACATAGATTTACCTGCACCCGGGATTCCTGAACAAAAAGAACAAATGCAAAAAGATGAATCAAAAGTACACGAACTTTTATCAAATTATGCTGTGAACGACCATGTTTTGGTGCGCTACTGTGACGATAAACAATGTAAATATTATGTTGGATTTATAGAAAATATTAAAATTGATGGACGGAAATATAATTACACAGTAAATTTTTTTAAGACAATAAAAAAGCCACAACTTGCATTTCGGATTGGCAAGAAAATTGATCGAGACGAGGTTGATGATATATGGATTGTGAAAAAAATTGTTTTAATGAAAAATCCTATAAATGCCAAAGAGTTCCTACTGACTGAAGAAAGCGATGTGATGTATTTTTGA
Protein Sequence: MVRTYQRKNTNTRNGKSYPPYVRYSEDNLRKAIEAVHSRSLRLKEAAENYNIPISTLSRKCRNINCTQEKAGHPTLFSKEEEKFFIDNVQLLSHWGFPLDSTDLRVYAQKYLNKIGKTIYGLEDNMPGVDWARNFLNRHKSEISNRAASNISSDRAKTTPLVIDDFFDHYAKSVEGVSPDCLINYDETNLTDDPGSKKYIFKRGCKYPERVINSSKSSISLMFAGTADGQSLPIYVVYKAEHLWDQWLEGGPEGTRYNRSKSGWFDSVCFEDWFNTVIVPYAKKKPGRKVVIGDNLSSHFSHSVLQTCDELNIMFVCLPPKTTHLLQPLDVAFYAPLKKYWRDVLTKWKKTEGLKHKTLVKSSFPRLLSKLKNKLVENGAESTNLIAGFNKCGLYPINPERPKSRLPQRLIVSEEQIENTTSSVVIDILQEMRSPASATGQTTRKRKCNVPPGMSITAEDIVRNQTEKDKQQHKRKNTQKKVSDKNKNIKSLDEDSNTDSEITRETENEELNQADTQPTAGPSGLCNAYAFDSGSSDDQRPRHEKITETAKKPEIEEYISIKGKGKGKKSKPKTENNHTKISKLENTLSLEKNISSKGKKRKKNKSKIKKRQMKISDLKNLDLDPESIEKLIASVKAEKSKNKKNKRYSDSDTTSVSDIMSIHSDSDIIDIDFGGSISDVKSDDEDYGCNKDMSNCTYGKQPTVAEIIPIPDYDDKFIDRSCVPESSVEQKTDGNLKTNYNTKLQYVTDKTGNDPSSTATICDDIDLPAPGIPQTVAEIIPIPDYDDTFIDRSCVSESSVEQKTEGNLKTNYNTKLEYVTDKTGNDPCSSAKLCDDIDLPAPGIPEQKEQMQKDESKVHELLSNYAVNDHVLVRYCDDKQCKYYVGFIENIKIDGRKYNYTVNFFKTIKKPQLAFRIGKKIDRDEVDDIWIVKKIVLMKNPINAKEFLLTEESDVMYF

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00720239;
90% Identity: iTF_00720239;
80% Identity: iTF_00720238;