Epin025644.1
Basic Information
- Insect
- Euzophera pinguis
- Gene Symbol
- clz9
- Assembly
- GCA_947363495.1
- Location
- OX376172.1:14254365-14256240[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 3.8e-07 9.5e-05 22.6 0.1 4 37 11 43 8 49 0.88
Sequence Information
- Coding Sequence
- ATGGCGCCGATTAGAAATTACACTGCACAACAAATGGCCAGTGCTATCCAGAAGGTGAAGCAGGGATCATCAGTATCAGAAGCTGCGGCCTTATACGGTGTCCCTAGGATAACACTGCGCAATAAAATAACCGGTAAAACTCCTGAGCGGCACCCCGAAATTTCACAACGCTTCTCCCAAAATTTAACTAAATCCAGAGATGACGTCACCGAAGATGATATTGTGCAGTGGTTTGCAACAAACAAAGCGTATTTAGAAAGTAAAGGGTTATTAGAAGCTCTGAATGATCCCAGCCGCATTTTCAACAGTGATGAGAGTGCATTTTTTTTACAACCAAAAGCAGGATCTGTTTTGGTCCGCAAAGGAGAGAAAAACGTATATAGCAAATCGGGTGACGAGAAAGAAAACTTAACGGTTTTGATCACAGGGAACGCTGCAGGGGTTTTGGCTCCACCGATGATAGTTTTTCCGTACGAACGAATTCCGCCGTTGATATCAATGACTGTCCCAGGTGATTGGGGAATTGGTCGATCTGAGACAGGATGGATGACCTCGCGAACCTTTTACGAATATATGACCAACATCTTCAACCCTTGGCTAGAAACAAAAAAAGTTACAAAACCCGTAATATTTTTCCTGGACGGTCACAGGTCTCACATGACCTTACATTTAGCCGAGTTTTGTAAAAATAATGGCATAGAAATTATAGCTCTTCACCCCAATTCGACTCATTTACTACAGCCGATGGACGTAGCTGTTTTTAAACCCTTAAAAACGTACTGGAAAAATCAAGTAGCCAAATGGAAGGCCGAAAACCCAGGACAACAACTAAAAAAGGCTAATTTCGCTCCGAATTTACAAGTGGCGATAGAAAAATTGTCTCCAGATACAATCAAGAATGGATTCCGCAAAAGCGGTCTCTTTCCTTTTGGTCCCGAGTATGTAGATGTGACCAAAATAAATGCTGAAAAACGTATACTCCCCAAAAATAATGACGTGACAGAACAGGAAAATTTTGTTAAAACATTGGAATCAGAAATCACAAAAATATTTTCACAAGATAAAATGACCCAATTCAACCAAATGTACTGGTCACAGAGAACTGATGTAGAAAATCTATTACCTAATGAAGATATATCGTTATACATTATATGGGCAAAAAATGAAAACACAGCTTTAGACAATTTTTCAGCAGCAACACATACACATGGAGGAGATATTATTCAGAATCCCCATTTACAAAGAGAACAGACAATAACAAGTCCAGAACCGGAAGCTACTGACAAAACAAGACAGGTTTCTGTTGAGGAAATCGGCGTACAAAAAAATCCTTCACCTGAAATACCGTATGAACTTCCACAACAAAATGTTTGTCAACCGACGCAACAACACTTGAACACACATGGATCAGGCGAAGCTATAACCACTCCCCAGATAGCTGACATAACACCAAGTAAAACTACCACAACTAATCCTCTCTCAAATAATCTCAACCCAGCAGACTATAGCACACCAGCTAAAAATGTTCAAGCATCTATTAACCCATCAATGCCAAACCTACAAAATAACTTGTACATTCCGTCTCCATTCAAACGTGCATTGTATTGGCCAGAACCTGAAAAAAAAAAAAACGACGCATAA
- Protein Sequence
- MAPIRNYTAQQMASAIQKVKQGSSVSEAAALYGVPRITLRNKITGKTPERHPEISQRFSQNLTKSRDDVTEDDIVQWFATNKAYLESKGLLEALNDPSRIFNSDESAFFLQPKAGSVLVRKGEKNVYSKSGDEKENLTVLITGNAAGVLAPPMIVFPYERIPPLISMTVPGDWGIGRSETGWMTSRTFYEYMTNIFNPWLETKKVTKPVIFFLDGHRSHMTLHLAEFCKNNGIEIIALHPNSTHLLQPMDVAVFKPLKTYWKNQVAKWKAENPGQQLKKANFAPNLQVAIEKLSPDTIKNGFRKSGLFPFGPEYVDVTKINAEKRILPKNNDVTEQENFVKTLESEITKIFSQDKMTQFNQMYWSQRTDVENLLPNEDISLYIIWAKNENTALDNFSAATHTHGGDIIQNPHLQREQTITSPEPEATDKTRQVSVEEIGVQKNPSPEIPYELPQQNVCQPTQQHLNTHGSGEAITTPQIADITPSKTTTTNPLSNNLNPADYSTPAKNVQASINPSMPNLQNNLYIPSPFKRALYWPEPEKKKNDA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -