Epin024675.1
Basic Information
- Insect
- Euzophera pinguis
- Gene Symbol
- -
- Assembly
- GCA_947363495.1
- Location
- OX376183.1:6004988-6013637[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 3.3e-05 0.0081 16.5 0.0 7 35 60 87 56 92 0.88 2 2 0.086 21 5.5 0.0 6 34 250 277 248 286 0.85
Sequence Information
- Coding Sequence
- ATGCGGACATCGACAGAAATAGTGACGCGCCATTTTATTGACGTCGACCACGGGATCCCTTTAAATATCCACGCGAGACCAAGAATTGTTGGCAGACGCCCAAATGCAATCGTCAACATAGAAACTGACGTTTTTCAAGAGAAATCTTATAAACAATATTCGTCTCAACATTTGAGGGATGCGCTTATTGCTGTTAAGAAAGGTTATAGCGTTTACGCAGCGTCGAATAAGTATGGGGTGCCAAGGAAAACTTTAAGGAATTGGATGGAAAAATATGATATTAAGAGTCAGTTTTCAAAAGGACGCCGCGGGGCGAGGACTACGCAGATTTTGGACCCTTTAGATTTGATGGTGGAAAGCAGGTCGGAAGCTTTTGATGAGACGATTAATATTCCCATTGCAGATTTCGCGATAGCAAACGTACAGTGCCAGTATGATAGTCCGTCGGACACGGAGGAGGACCGGACGGCGTCCGCGCAGATCGGCAGACCGACGGACGACCATAATTATGATTTGAGGGACGAACCGCCTGCGTTTATTATTCAGCATGTTACTTCTACGTCACAACCGGCGGCATCGTCTCCCCAAACCCCTTTTCTCGAGGTGACTCCGAAGATCATGACCCTGGGTCCCGGATACGTGCCTTCTGTCAATGTCATCCACGTCGGAGAACGGCCACAGGTGACGCAATCAACACAACAAGAGTACAACATAAACAAACGCATCCGCCGCAGCGAGGTGGTCCTGAAGCAGGCCGCGGACTGCGTCAGCCGCGGACTCACCTTCCAGACTGTCTCCGAGCAGTTCAACATACCTATATCTACTATACGATTTTTCATGGCGCGAAAGGGCATTTTACCGCAGCGGAGGCGCGGCCGCAGTACGCAACTGAGGCCCTGCCACAGTCCTGAGCCTCCGTTTCACATGCAACACTTCAAGCTACCTGATATGATTGCATTGCAAGAAGAAACGGACAAACAAACATAA
- Protein Sequence
- MRTSTEIVTRHFIDVDHGIPLNIHARPRIVGRRPNAIVNIETDVFQEKSYKQYSSQHLRDALIAVKKGYSVYAASNKYGVPRKTLRNWMEKYDIKSQFSKGRRGARTTQILDPLDLMVESRSEAFDETINIPIADFAIANVQCQYDSPSDTEEDRTASAQIGRPTDDHNYDLRDEPPAFIIQHVTSTSQPAASSPQTPFLEVTPKIMTLGPGYVPSVNVIHVGERPQVTQSTQQEYNINKRIRRSEVVLKQAADCVSRGLTFQTVSEQFNIPISTIRFFMARKGILPQRRRGRSTQLRPCHSPEPPFHMQHFKLPDMIALQEETDKQT
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -