Epin003644.1
Basic Information
- Insect
- Euzophera pinguis
- Gene Symbol
- -
- Assembly
- GCA_947363495.1
- Location
- OX376180.1:4058822-4068040[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 9.5e-11 2.4e-08 34.2 0.0 4 41 157 194 155 198 0.91
Sequence Information
- Coding Sequence
- ATGGAGAACACAGTGTCAAAAAAGGAAGAAATATTTGCCCAGTTTGAAGGAGAACAAGCAGCTGCAGCTGCAAGTGATATCCTGTCACCGAACCAACATTATGCCATGACAGATCTATACAATGACTTCGGCAGAAGATTTGTTCCTCAATACCCTTATTATGAGAAAGAGAAGCAAGATTTAGAGGATAAGAAAGCGGAAGACAATTTACACAAAACAATAGAGGCGGCCCCTGAGTTCGTGGTGGCAGTGGCAAAGCAGTCAAAATTGCTCGAAGACTCCCAACCTAACAACCCTACTGATGATGTGATCAAACGCGAAAGTCTAAGATCTGGAGCTTACTGGAACGATGTATGGAAAGAAGATGTGAATCCAAATAGTCTCAGAACACGCAATGAAGAACAGTTATCCAACAAGGTAGCAAAGAAAAGGAAAGAAAATACGAAAATATTACGCTACCCAGATTCAGCTATGCAATCTGCAATAAAAGCAGTGCGTGAGGGTACATTTAAAATAAGAGAAGCTGCTCGACACTATGGCGTTCCACACAGTACTCTGATAAATAAATTAAAAGGAAAGGTACCCGAAAATCGGAAGATGGGGCGTGACACTTATTTAACAGAGGCGGAAGAAAATTTACTAGTTGCTTATATTATAGCAAATGCTAAAAAGGGGATACCATTAAAACGCCAAACATTAGTGGATACGGTAAAAAAAATTATTGAAGAAGATAATCGTGAAACACCTTTTAAAAATAATTGTCCAGGTAGAAAATGGGTTGATTTATTTCTGAAACGTCACCCACAGATTAAAGAAAGATGTGCCGAAGCCATATCGTCATCACGTGCCCATGTAACAGAATCTGATTTAAGAGGATGGTTCGATTCAGTTAAGGAATATTTAAGGAGTGAGAATTCCCTCGATATACTCGAGGACCCTACTAGGATTTACAATGCAGATGAGTCAGGATTTCAAACTTGTCCTGAATCTGGTAGAGTTTTAGGACCAGTTGGAATGAAAAATTTTTTTGAAGTTAAGTCAGGAAAAGAAAAGGAACAACTAACTGTGATGGCTTCTTTGAATGCAGCTGGGAAAATTGTGGAACCTATGATTGTATATCCACTCAAGCGTATATCCAGGGATATAGCTAATAACGTTCCATTAGGTTGGTCTATTGGAAAGTCTAATAAAGGATGGATGACTGGTCCTCTATATTTTGAATATATTGCAAACATATTTGACCCATGGTTAAAAAAAAATCAGATTACCAAACCTGTATTACTTCTAATAGACGGGCACCGATCACACTTGACCTTACAAGTGGCAGAATATTGCGCAAACAATCAAATTTTTGTGCACGCTCTTTTTCCTAATTCAACACACATAACCCAGCCCGCCGATGTGTCACTTTTCAAATGTTTGAAAAGTGGCTGGCAAAATATAATTTACGAATATAAAAGAAAAAGTGGCAATAGACACATAACTAGAGCTGGCTTTGCGCCACTTCTTTTTAAGGTGTTTGAAGAAAAGGTTACGCCAGAAATAGTTTGTAATGGCTTTAAACGATGTGGACTTTATCCTTTTGACCCTTCAGCAGTAGATTATACGAAATGTATGGATCATGAAGTTCGTAGAATTGCACCAACTGTAGGTACAGGTACAGGAGTGGAAATAATTCTATTACTAGAATCTTTTATGAGGAAAGGTCGAGCAGAACAATTTAGACGAGCAAATGATGAATGGAAAGGTGATGAATCGGCTAAAGAACTGTTTTACGTCTGGAAAAAAATTCGCCAATATTGTCTATCTTCCACCTGTTTTCCTATTCAAGAAGGTAGGAGCTGTACTAGAGAAGCTACGCCTGTAAACACAGAATATGAGTTACCCAACATTTCCCCATCACTATTACAGCCATCTGAAAGCGCTCAAGCAAGTAGGCGCACATCTACAGCGTTTTCAGAAATGGAAATGATTGCGATTGATCAAAGTAAGAACCCGATATCCACTTCAGAAAACCAATTAATTCCGTTTGTCCAGGCTGCATCAATTTCAACGCCCACTCCAGAAACTTGCAATAGTTCTAAAGATGCTGCACCAATGGACGTTCTAGACGATATACTTTTCAATATGCCCCCTGTACTCTTTCAAACTCCGCCTAGCGCTTCAGTTAATCGGCGTACATCTGCAGTTACTCCAGAGCCTGAAATCGCATCTAAAGAACAAGAACGCAACACAGTTTCTACTTCCAAAAATAAACTAACCCAGCTGATGACCCAAAAGCAAAAACTAATTAGCCCTGCCTTTGGTAACCATATTTTGTGGCCGTCAGACTCGCCAATAAAGAAAAAAACAAAAGAACGCTTGCCACTTGCTGTGACATCAAAATATTTCATTAATTACTTTGAAAAAAAAGAAGAAGAAAAGCAGAAGAAGTTAGAAGAAATAGAAAACCGAAAACGAAAGCGTGAAGAGAAGAAAAAGAACAAAAGTAAAGTAAAGAAACCAATGATTCGCTCTCTCTCCAGTGACTCAGATGAAATAAAGAAACGTAAAGGGCAAGACAAAAGCATAAAAAAGAAACAAAACAGAATTATACAGAGTGACAGTGAATCAGACAATGACATAATTGATACAATACAATTAAATAAAGAAAATGAAAACGAAAATATACAAATAGTAGAACCTGAATCGGATTCCGAAGACAAAAACTTAAGTATTTTATCAACGAAGAAAACAGGAATATTTAAAGGAAATTATGTTATCATAAAATATGAGGGTTCTTATTTTCCAGGAATTGTCGAAAATATAGAAGAAGATATGTATGAAATCAGCACTATGGCTTATTCTACAAATAATACATTTAAATGGCCAGAAAAAACGGACAAGATCTGGTACTGTCGAAGAGATGTGATAGAAATTACAAATAAACCCGTACTCTCCAACAAAAGAGGATTTTACATTGTGGAGGAAATGAATAAATACCTTCCATTCACAATTTAA
- Protein Sequence
- MENTVSKKEEIFAQFEGEQAAAAASDILSPNQHYAMTDLYNDFGRRFVPQYPYYEKEKQDLEDKKAEDNLHKTIEAAPEFVVAVAKQSKLLEDSQPNNPTDDVIKRESLRSGAYWNDVWKEDVNPNSLRTRNEEQLSNKVAKKRKENTKILRYPDSAMQSAIKAVREGTFKIREAARHYGVPHSTLINKLKGKVPENRKMGRDTYLTEAEENLLVAYIIANAKKGIPLKRQTLVDTVKKIIEEDNRETPFKNNCPGRKWVDLFLKRHPQIKERCAEAISSSRAHVTESDLRGWFDSVKEYLRSENSLDILEDPTRIYNADESGFQTCPESGRVLGPVGMKNFFEVKSGKEKEQLTVMASLNAAGKIVEPMIVYPLKRISRDIANNVPLGWSIGKSNKGWMTGPLYFEYIANIFDPWLKKNQITKPVLLLIDGHRSHLTLQVAEYCANNQIFVHALFPNSTHITQPADVSLFKCLKSGWQNIIYEYKRKSGNRHITRAGFAPLLFKVFEEKVTPEIVCNGFKRCGLYPFDPSAVDYTKCMDHEVRRIAPTVGTGTGVEIILLLESFMRKGRAEQFRRANDEWKGDESAKELFYVWKKIRQYCLSSTCFPIQEGRSCTREATPVNTEYELPNISPSLLQPSESAQASRRTSTAFSEMEMIAIDQSKNPISTSENQLIPFVQAASISTPTPETCNSSKDAAPMDVLDDILFNMPPVLFQTPPSASVNRRTSAVTPEPEIASKEQERNTVSTSKNKLTQLMTQKQKLISPAFGNHILWPSDSPIKKKTKERLPLAVTSKYFINYFEKKEEEKQKKLEEIENRKRKREEKKKNKSKVKKPMIRSLSSDSDEIKKRKGQDKSIKKKQNRIIQSDSESDNDIIDTIQLNKENENENIQIVEPESDSEDKNLSILSTKKTGIFKGNYVIIKYEGSYFPGIVENIEEDMYEISTMAYSTNNTFKWPEKTDKIWYCRRDVIEITNKPVLSNKRGFYIVEEMNKYLPFTI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00720165; iTF_00720166; iTF_00720179;
- 90% Identity
- iTF_00720165;
- 80% Identity
- -