Epin006321.2
Basic Information
- Insect
- Euzophera pinguis
- Gene Symbol
- -
- Assembly
- GCA_947363495.1
- Location
- OX376160.1:7171840-7173399[+]
Transcription Factor Domain
- TF Family
- HTH
- Domain
- HTH_psq domain
- PFAM
- PF05225
- TF Group
- Helix-turn-helix
- Description
- This DNA-binding motif is found in four copies in the pipsqueak protein of Drosophila melanogaster [1]. In pipsqueak this domain binds to GAGA sequence [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 2 5.6e-13 1.4e-10 41.3 0.0 1 37 13 49 13 57 0.92 2 2 0.38 95 3.4 0.1 14 26 137 148 134 149 0.89
Sequence Information
- Coding Sequence
- atggggaaagaaaaagctgtagatccaagaaaatggacagaagaaaatatgaaaaaagctatagaagatgtcataagcaagaaaatgggagtgaatgaagctagccggacatatgaaataccgtcaagaaccttgcgtagacacatcctgaaaggttgggatagcaagcagaatataggtagaccttcggaattaggatatGAAAATGAAATAAGACTTGTAGCTCACATTAAACGTCTCGAATCCATCGGATTTCCACTAGAACAATCAAGACTGCAGTCTATTGTTTACGACTTTGCTGAAAAACTAGAATTACCTCATCGGTTTAATACGGAGAAAAAACAAGCTGGATGGGATTGGTTTCAAGGGTTCATGAAGAGGCATCCAGAGCTAAGTAAAAGAAAAGCGGAAGGCCTGTCCCTGGCGAGAGCTGCTGgtaaatacaaaaaaccggaattttctgaaggtctcccgccaggatcagatgtgtttatgaatcaaaaatcatcttacatcaacgctgatctattctacaactggatgaaagaacattttattccacgaaagtcagatgggaaagttcttctgattcttgatggtcattcctcccattcgaattcacataaaatgctacagttagctaaagaaaacgaaataattttgctttgcctacctagccacaCTACCCAGGCTCTCCAACCTTTAGACAGAAGCTTTTTTAAGCCTTTTAAAAGTTACCTGTCTAAGGCAGTAACCACTTGGTTTATAAACAACAAAGAAAGGAATTTAAACCGACAGCACATTTCAAAACTAATTGGTGAGGCCTGGTACAAGTCTGCAATACCAGCTATCGGTGTTTCAGGATTTAAGGCAACAGGGATATATCCCTATGATCCAAACGTTGTTCCTGACTATTTCTTCAGCATTTCTGATGCAGCAGTTAGAAACAGACCTGACAATATTCAGACAATTCAGAATAATGACCTTTCTTTGCAGAGTACTTCCATATCTTCAATAAATCAAAGCGATCAGATTGCACACGCTTCTGGTGTTTTACAGAAAGAAACACCAACCAAGACCTTACAAATAGTGAGTCCATTACCTGTAATACGTCATAAAATCAGTAAGAGAAAACAGAGCGTTAAGATTTTGACATCAGAAACGCATTTAGCAGCTCGTAAACTCTTTGAAGATAAAAAGAAGCCGCAGGAGAAACCCTCGACCAGAGCACCAGCAAAACGTAAGAAGAATGTTGCAGAAGTGTTGTCATCATCGGAAAGTGAAGAAGAGTTATAG
- Protein Sequence
- MGKEKAVDPRKWTEENMKKAIEDVISKKMGVNEASRTYEIPSRTLRRHILKGWDSKQNIGRPSELGYENEIRLVAHIKRLESIGFPLEQSRLQSIVYDFAEKLELPHRFNTEKKQAGWDWFQGFMKRHPELSKRKAEGLSLARAAGKYKKPEFSEGLPPGSDVFMNQKSSYINADLFYNWMKEHFIPRKSDGKVLLILDGHSSHSNSHKMLQLAKENEIILLCLPSHTTQALQPLDRSFFKPFKSYLSKAVTTWFINNKERNLNRQHISKLIGEAWYKSAIPAIGVSGFKATGIYPYDPNVVPDYFFSISDAAVRNRPDNIQTIQNNDLSLQSTSISSINQSDQIAHASGVLQKETPTKTLQIVSPLPVIRHKISKRKQSVKILTSETHLAARKLFEDKKKPQEKPSTRAPAKRKKNVAEVLSSSESEEEL
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -