Epin019272.1
Basic Information
- Insect
- Euzophera pinguis
- Gene Symbol
- retn
- Assembly
- GCA_947363495.1
- Location
- OX376171.1:5563043-5579551[-]
Transcription Factor Domain
- TF Family
- ARID
- Domain
- ARID domain
- PFAM
- PF01388
- TF Group
- Helix-turn-helix
- Description
- This domain is know as ARID for AT-Rich Interaction Domain [2], and also known as the BRIGHT domain [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 1 2.8e-14 5.9e-11 43.2 0.0 17 80 18 79 12 85 0.92
Sequence Information
- Coding Sequence
- ATGTCTTCCGCGAAAGATGGACTTGCTTGGGCAGTTGCAGAATTGATAGCTCGAACTCCGATAAACCGTCTCCCGATCATGGCTAAGTCCGTCCTGGACTTGTACGAGCTGTTCAACCTCGTGGTCGCTCGTGGCGGCCTCGTGGAGGTCATTAACAAGAAACTATGGCAGGAAATCATTAAAGGCCTACGACTGCCATCCTCTATCACATCAGCTGCGTTTACACTTCGCACTCATGAGGCCCTAAACCTAAGCGAGAGTCCAGGCTCGACCACCAGCGGGGGCAAGCGCGAGGCGACCGGCCGCACGCCCGAGCCCGCCGCTAAACGCCGGCCCGCCTCCCCGCGCTCGCCGACCCCCGGCCCCGCTGGCGAGCACAGCACACCCAGCACACCGAGCACACCGAACACGTCTCGCGCTTCTACGTCACAGGCACGGGTCAATGGCCATCGTACGCCTCCCGCGCCCGCTACTAATGGGGGTAATGGTGCTGCCTTTAAGATTACTACTCGAGGCGACGCAACCACAGGTGACCAGCAATTAGATGTGTCGATTGAACTCAACGGCGTCACATACGAAGGTGTCCTGTTCCCGTCCCAGGGCGATGACAGTGAGAACAGCCACAGCCAATTGGTCTCTTAA
- Protein Sequence
- MSSAKDGLAWAVAELIARTPINRLPIMAKSVLDLYELFNLVVARGGLVEVINKKLWQEIIKGLRLPSSITSAAFTLRTHEALNLSESPGSTTSGGKREATGRTPEPAAKRRPASPRSPTPGPAGEHSTPSTPSTPNTSRASTSQARVNGHRTPPAPATNGGNGAAFKITTRGDATTGDQQLDVSIELNGVTYEGVLFPSQGDDSENSHSQLVS
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- -
- 90% Identity
- -
- 80% Identity
- -