Basic Information

Gene Symbol
Xbp1
Assembly
GCA_947363495.1
Location
OX376159.1:15406117-15408004[-]

Transcription Factor Domain

TF Family
TF_bZIP
Domain
bZIP domain
PFAM
AnimalTFDB
TF Group
Basic Domians group
Description
bZIP proteins are homo- or heterodimers that contain highly basic DNA binding regions adjacent to regions of α-helix that fold together as coiled coils
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 3 3.7e-17 2.8e-14 53.5 12.1 2 62 44 104 44 107 0.94
2 3 0.00044 0.34 11.6 0.5 32 55 88 111 87 115 0.91
3 3 0.97 7.5e+02 0.8 0.2 16 48 133 166 129 183 0.77

Sequence Information

Coding Sequence
ATGAGCGCCCCTATCATCATTACCGTGCCTAACAACTACCTGGCGGTGGAAGAGATGGATTCCAACGTTGTCCTGGATGTCTCACCTTCTCCACCGTCCAGGAAGCGGCGTCTGGACCATCTGACGTGGGAGGAGAAGATGCAAAGAAAGAAACTGAAGAACAGAGTGGCAGCACAAACATCGCGCGACAGGAAAAAGGCTAAAATGGACGAAATGGAACACCGTTTGAAGCAGTTTATGGATATGAATGAAAGATTGGCGAGCGAAGTGGCTAGCTTGAAAGCGTTGAACGAGCGTCTTTTGAGCGAGAACGCAACGCTTCGCAGCGAGTCGGCGGCGCGCGGCGTCGCGGGGGCCCACGGACCGGCAGCGTCTCCTCAGCAGAAGGAAGGGCCCCCGACGGCGGCGCGCGCGGCTCGGCTGCTGCTGGCGATGTGCCTGCTCTCACAGACCTCCTCGCTCACCTCGACTCAGAAGAGTACCTTGACAGCCTCCATCAACTTGCAGACTCCTTACTACAAGAAATTAGCGCAAGTGCTTCAGGAGCGGTTGAAAATGTCTCAGTCCGGGAACCTGGAGAGTGTACTGAAGGAAATAAAGTGGATACTGTCTCAGCACTCTTATGCACATCCCTACACACCTGACATCGTTATCTCTGCACCTAAAGAGACAGTAAAAATAAAGGAGGAGACCGGAAATGACAAAGGAGACATTTTCTATGCCAATTTTGACGAAGATAATGACTGTGTCACCGTTGAAGTCCCATGTGAGGAGCAGGTTGTCGAAGAGGTTACTCCTGTGAAAGTAGATGCTCCTATTAAAATTGAAACAGACTTCTTGAATACGGACTTTGATTTGAAATTGGTGTCACCGATGACTTTGTCACCAAATTCCATTGATGACAACTTGCTGCTCTCACCGTCACACACAAGCCTTAGTTCGGATCTTGGTTATGAGTCATTGTCGTCCCCCTTCAGCGAACATGACGCAATGGACTTGTCAGATTTTTGGTGCGAATCATTTTCAGAACTTTTTCCCGATTTAGTTTAG
Protein Sequence
MSAPIIITVPNNYLAVEEMDSNVVLDVSPSPPSRKRRLDHLTWEEKMQRKKLKNRVAAQTSRDRKKAKMDEMEHRLKQFMDMNERLASEVASLKALNERLLSENATLRSESAARGVAGAHGPAASPQQKEGPPTAARAARLLLAMCLLSQTSSLTSTQKSTLTASINLQTPYYKKLAQVLQERLKMSQSGNLESVLKEIKWILSQHSYAHPYTPDIVISAPKETVKIKEETGNDKGDIFYANFDEDNDCVTVEVPCEEQVVEEVTPVKVDAPIKIETDFLNTDFDLKLVSPMTLSPNSIDDNLLLSPSHTSLSSDLGYESLSSPFSEHDAMDLSDFWCESFSELFPDLV

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_01220394;
90% Identity
iTF_01220394;
80% Identity
-