Esal016305.1
Basic Information
- Insect
- Euura saliciscinereae
- Gene Symbol
- -
- Assembly
- GCA_018420115.1
- Location
- JAFFZH010010426.1:4211-6877[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.84 93 4.4 3.8 1 23 112 135 112 135 0.93 2 13 0.066 7.3 7.8 1.2 1 15 193 204 193 213 0.77 3 13 0.00041 0.046 14.8 0.8 2 23 312 333 311 333 0.96 4 13 0.75 84 4.5 0.2 5 19 414 428 413 431 0.82 5 13 0.091 10 7.4 1.6 1 23 594 616 594 616 0.98 6 13 1.8 2e+02 3.3 0.3 2 19 649 666 648 668 0.79 7 13 3.6e-05 0.004 18.1 0.6 1 23 684 707 684 707 0.97 8 13 6.8 7.5e+02 1.5 0.8 1 23 714 737 714 737 0.79 9 13 1.6 1.7e+02 3.5 0.7 2 23 742 763 741 763 0.90 10 13 0.0022 0.24 12.5 4.2 1 23 768 791 768 791 0.96 11 13 0.073 8.1 7.7 2.1 2 23 800 820 799 820 0.92 12 13 0.00034 0.037 15.1 0.9 2 23 825 847 824 847 0.94 13 13 0.00082 0.091 13.9 0.0 2 20 856 874 855 876 0.95
Sequence Information
- Coding Sequence
- ATGGATATTCATTCCGAGTGCGATAAACGATTCGGACTGAGAGACCTGGTCGTCAAACTAGAGCGGTGCGACAAGATATGGAAGACGCTTCAGCTGATCAAAAACATGCACGAGGACTTCGGGGATATCGGAGGCTGTATCAAAAGGGAGCCAGTGACGCCTGAAAAGCCGAAGAACAAGAAACCTCCGATGACTTTCATACCGGATAAAACGTTACCGTTGAATCTCATCGGGGAGCCTAATTTACCTTACATTAAGTATCAGCCTATTTTTAACAGCGTCGACGAGTCGTTTCCGCAGTTCAAATTGTCAGAAAAGAGTCGAGTAAATTTGTATCACTGCGAGGTTTGCAGTCAGGAATATTGCAATTATAAAAGGTTCACCGAGCACCAAGAAGCGGTACACGGAATTGTAGTATCTAGGAAAGTAGCAGCTAAGAAAGAAAAGTCACAGAGCAAAGGCAGCAGGCGGAATTCGACGGAGAGCAATAACGCTCAGTTTGTTAAGAACTTGGTGGTCGATGAAAATATTGACCTGCAAACTATCGTCAATAATTCATCGGCGTCAAATGACAGCTTTAGATGTAAATTGTGTGATAAATCTTACAGGAATATTAAGAGACACATGGTAGAATATCATAAGATTAAGTGCTTCGAGGTACTAGGTAAAGTCACCGATCAAAATTCGAATATTGAGAAGACTCAATCGGCTCCGGAAATCGATTTGTTAGACTCAAATTTGCTTAGAGGAGTAGAGAGGGCTCTCGATCATACCGATGATATAACGTCGCCAGATATTCAATTCTCGACTGAAAACAGTAAAAATTTACTCAAAAGAAGACTCGCAATGCCTAACATCGGTCTTCGAAAGAAATCGAATAGCGATGATCCTGAAGAACCGGAAACGGATGTAGAAAATACAAAGGAGTCGTGGAAGTGTGAGATTTGCAAAAAAACTTACGTTCAATATAAATGGTTTAAGGCCCATGAGTTAAAGCACAATATTGACGAATACAAACCCCATCCAGAGGTGGAGGGACATAGTAACGAATCGAGAAACACACCTGATGATATAACTTGTGTTGAATCTGTACAAAACTGCGGCGACGATGACAAAGATAACAGGGTCCCGCTGACTAGATCTAGTTTTACCAAAGACAGCAGTTCTGAGAAATTAGAATCCGGATTCTCGATAGCATTAGGATACCAGAGGGAAAAGAAAAAGTCACAGATCATCTGCGATTGCGGAAGATCTTTCCGCACACGAGCCATTCTCTCCGAACATAAGCTTCGCTGTAAATCTGTAAACGCGACTGATACCTGTAAATCGAACGAAACGCGAACCAGCACCGACAGAGATTCGGGGATCAGCATAACTATCAAGAAGAAGAATAATTCGTACGAAATAGTTAGCAAGGAAAGCAGCGACGAAGAGGCTTCGAGAAATGGGCACAGGATAGGGGAGCCTGAAATATCCGAAGATACTTCGGATTCTTCGTCCGATAATTCAGACAGCAGCGAGTTTGACGATCAGCTTGAAAATCTTATAGCCGAAAAGTCGAAATACAGCGCTGATCATCGTGTCATGATATTGGAATTGGCGGAGGAGGACGCCGATGTCGATATCGAAGATGAACTCTGTACAGAAAACTCCAACGCGGCGAGTAAGAGCGTGGCGAATAGAGTATCCTCCAAGAATCAGTACCGGGTTCCTACTTTGAGAGACTTGTGCAAGAAAATCTTCATCAAACAAGGCAAGCTACCAAAGGAAGAGATAAAATACAGGTGTAAGACCTGCAAAGTGTATCTCGGGAGCAAAGAAAAGTTATCAAAGCACGTCGAGAAGCACAAAAAATTAATGAAGAGGTCTTGTTCCTGCGGAATCAGATTCTCTGCCATGAAAACCTTCGACGATCACATCGCAGAAAAACATCCGGCCTGCACCGTTTGCCCTTATTGCAAAGAAAAATACGCGAGCATCGTCGGATTGGGAGAACACTCGTGCCTGGTGAATGAAGGAGCTCCGTACACAGAAATTTACAACGAAAATCATCCGTGCCCGAATTGCAATATTGCTTTCAACACGATTACCTGGCTGCAGAGCCACATGAGATCGAAACATCTGGATCCAACTTTGCCCTTTCAATGTTATCAGTGCTTGGAGAAATTTCCTAACGAGATAGCGAGGAGCTTGCACGCGCATAAAGAACACAATCGCGAGTCCGTTTGCGCTGTTTGTAATCAGAAATTTCAGAGCGTTAAGACTAAACAGAAACACGAAGCCTATCATCGGGGAGTCGGGTTCCCGTGTCACAGGTGTAGGAAAACTTATCGATCGAAACGGAATTATTTGAATCACGCGACGACTGTCCACAGTGATTTCAGCAACGACAAATTACAGTGCTCGATTTGTCAGAAAAGCATAAAAACGAAATCATTCAAAAAACATATTTTGAGACACAAGAGTATTCTACAATGCGAAATGTGCGACAAGGTTGTATACGACTTCAGAAACCTTGAGAGACACATCATGGATTGTCACGGGAACGAAAATTACCCGCGTAAGAAATGTAACGTCTGCGGGGATTCGTTTCCGACTCAAGAACAGTTGGAAGCGCACATCGTTATCGAAAAATCAGTGAGAAATGAACGACACAAGGATGCGTAA
- Protein Sequence
- MDIHSECDKRFGLRDLVVKLERCDKIWKTLQLIKNMHEDFGDIGGCIKREPVTPEKPKNKKPPMTFIPDKTLPLNLIGEPNLPYIKYQPIFNSVDESFPQFKLSEKSRVNLYHCEVCSQEYCNYKRFTEHQEAVHGIVVSRKVAAKKEKSQSKGSRRNSTESNNAQFVKNLVVDENIDLQTIVNNSSASNDSFRCKLCDKSYRNIKRHMVEYHKIKCFEVLGKVTDQNSNIEKTQSAPEIDLLDSNLLRGVERALDHTDDITSPDIQFSTENSKNLLKRRLAMPNIGLRKKSNSDDPEEPETDVENTKESWKCEICKKTYVQYKWFKAHELKHNIDEYKPHPEVEGHSNESRNTPDDITCVESVQNCGDDDKDNRVPLTRSSFTKDSSSEKLESGFSIALGYQREKKKSQIICDCGRSFRTRAILSEHKLRCKSVNATDTCKSNETRTSTDRDSGISITIKKKNNSYEIVSKESSDEEASRNGHRIGEPEISEDTSDSSSDNSDSSEFDDQLENLIAEKSKYSADHRVMILELAEEDADVDIEDELCTENSNAASKSVANRVSSKNQYRVPTLRDLCKKIFIKQGKLPKEEIKYRCKTCKVYLGSKEKLSKHVEKHKKLMKRSCSCGIRFSAMKTFDDHIAEKHPACTVCPYCKEKYASIVGLGEHSCLVNEGAPYTEIYNENHPCPNCNIAFNTITWLQSHMRSKHLDPTLPFQCYQCLEKFPNEIARSLHAHKEHNRESVCAVCNQKFQSVKTKQKHEAYHRGVGFPCHRCRKTYRSKRNYLNHATTVHSDFSNDKLQCSICQKSIKTKSFKKHILRHKSILQCEMCDKVVYDFRNLERHIMDCHGNENYPRKKCNVCGDSFPTQEQLEAHIVIEKSVRNERHKDA
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00718949;
- 90% Identity
- iTF_00718949;
- 80% Identity
- -