Basic Information

Insect: Euura saliciscinereae
Gene Symbol: -
Assembly: GCA_018420115.1
Location: JAFFZH010015953.1:38057-40756[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 9 0.02 2.2 9.5 0.8 1 23 159 182 159 182 0.92

2 9 0.37 41 5.5 1.8 1 23 205 228 205 228 0.94

3 9 0.57 64 4.9 0.6 2 23 359 381 358 381 0.91

4 9 4.4e-08 4.9e-06 27.3 2.2 1 23 387 409 387 409 0.97

5 9 2.5e-05 0.0027 18.6 1.5 2 23 425 447 424 447 0.95

6 9 3.3e-05 0.0037 18.2 0.7 1 23 453 475 453 475 0.98

7 9 0.00049 0.054 14.6 2.0 1 23 481 503 481 503 0.98

8 9 0.00067 0.074 14.1 3.2 1 23 509 532 509 532 0.98

9 9 0.025 2.7 9.2 0.4 1 23 539 561 539 561 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	9	0.02	2.2	9.5	0.8	1	23	159	182	159	182	0.92
2	9	0.37	41	5.5	1.8	1	23	205	228	205	228	0.94
3	9	0.57	64	4.9	0.6	2	23	359	381	358	381	0.91
4	9	4.4e-08	4.9e-06	27.3	2.2	1	23	387	409	387	409	0.97
5	9	2.5e-05	0.0027	18.6	1.5	2	23	425	447	424	447	0.95
6	9	3.3e-05	0.0037	18.2	0.7	1	23	453	475	453	475	0.98
7	9	0.00049	0.054	14.6	2.0	1	23	481	503	481	503	0.98
8	9	0.00067	0.074	14.1	3.2	1	23	509	532	509	532	0.98
9	9	0.025	2.7	9.2	0.4	1	23	539	561	539	561	0.94

Sequence Information

Coding Sequence: ATGAGCGAGGAAATGAATATCGAAGATGCGTCGTATATACGATGTGAGATAAACGGGACACAATTTTTTATAAAAACCGTACCCGACGAGGGCGAGTCTCTCTTAGCGGGAGAAGAGGACAAAGAAGTCTCAGACTTCCAGGATGCTTCTCAATTCGACAACGAAGAAGACTCTATTCCGCTGGTTTACCTAGATCGCCAGATTTACTACACCCTCCAAGACGGAGAGCTTCGGGCATTCGATCTGAGCAAGTTCGTCGATCAACCAGATCCAGAGGCCAAAGACGCGAGCAACGAAAGCACGGATTGCACGATACCCAAGTATCCGAACGAAGATGATATCCTAGTGGAGCAAGTCGACGTTGTTCAGGACAACAGACAGAATTCTTACAACGTAGTCGTGGACGATAATAAACTGATAATCGGACAGGATGTCAGAGTGAATGCTAACGATTTCGTGGAGGTCGTTACGGCCTTTAAATGCAAGATTTGTCCATACACGACGCAGGACAGGCTCCAGCTGCTTCAACACTTTGAGAATGTTCATATAAATCCTGTTGCCCAGGAAAAGGAACCGAAGGAGTTGAAAAGCCAGGACGATATCAAGCTGGTCTACATGTGCGGAGAATGTTCAAACTGCTTTGCTACCATCGACGAGTGTAGAGATCACATGATACAGGATCACCAACTGATGGACGAGAGCTCTGAGAAAAGGGTGAACGAAGGTGCTTCCAATTACCCGAAACGTTCTTACCTATCGAACAACGACGATTGCAGCGACAAGAATATAGCTAAGAACAAAGTCAAGGTGTCCAAGACGCTCGGTGCGAGGAAAATAGTCGGTAAAAAGTCATCGTCTATCGAAGTAAAGGAGAAAAATGTGAAATGTACGCATCAAGGATGTTCCTATAAATTTAGCACCGATGAAATAATGCAACAGCACGCTATCTGCCACACGGATACACAGAACGCTCAATTGTTCAAGTGTAACGTTTGCAGGGACGTTAAATTCTCGAAATGGAAACCGTGCAGCTTGCATTTATGGAAGGAACACAAAATCGACGTTGATCTTCTGTCCTGTAAAATCTGCAAAACGTACAAAAGTGCAACGATGGTAAAGCTGGTCACCCACATGAGAGTGCACAGCGATAATCGCGAATACGAATGTCCCGTGTGCGGCAAATGTTTCAAACAGTCGAGCCAGTTGAGAAATCATCGAGTGATGCATTTGAACAGGAAATCGAACGAAGTACCTCGCTGGTACACCTCAAAGACTTGCGAACTCTGCGGAAAGACTTACGCCGATTCAAAGTGTCTGAAAAATCACATGCAGGCTGTTCATTCTAAGCTGAGACCGTACGTTTGCAACGTATGCGGACACTCGAGCGCTAGGAAAGCCATGCTTCAGATGCACCTCAGACAACACACCGGCGACAAACCGTACAGCTGCGAGTTGTGCGATTATAAAACCGGTGATCACAACTCGTTGAGGAGGCACATCATGCGCCATACCGGCGTCAGACCGTACAAATGTCCGCATTGTTCCTATTCCGCGATACAGAGTAACAGCTACAAGAATCATCTAAGATCGAAACATCCCTCGCTCGCCGGTCTCTACACCTGCGAACTGTGTCCGTTTAAGACCGTGAACAAGGAGAGTTACATGCAACACGTAGGCAATCATGAAAAAGGACTAATCAAGGCTGCTATACAACAAAAGGACGATGAGAACGTGGAAGTATTTCCAGGGAACATAGCCGCGGCGCAATTGATATACAGTTGTTTGGGTGCTTTTTCAAAGGACGGTAAAACGATCGAAGCTAATTTGATGACTTCTTCGACGTCGGCGGACGGGACTTCGCAGACGATCACTATTCAGATACCGTCAAAGGATTTGGAGGGGTCTCTGCCCAACGGGGATCAAAATTTGTCGAATAAGAACGGGTTGACTCTCGATCAAGAGGATGACGAGACGATGCACTGTTTCCTTGCTATACCGAGAGAGGAAGAGGAGAATATTGACACCGGCGGTATAACTATTCCCGCTGAACCAGAGGCCGCTGTTGATACGGCGATGGATGTAGAAATTTGGTGA
Protein Sequence: MSEEMNIEDASYIRCEINGTQFFIKTVPDEGESLLAGEEDKEVSDFQDASQFDNEEDSIPLVYLDRQIYYTLQDGELRAFDLSKFVDQPDPEAKDASNESTDCTIPKYPNEDDILVEQVDVVQDNRQNSYNVVVDDNKLIIGQDVRVNANDFVEVVTAFKCKICPYTTQDRLQLLQHFENVHINPVAQEKEPKELKSQDDIKLVYMCGECSNCFATIDECRDHMIQDHQLMDESSEKRVNEGASNYPKRSYLSNNDDCSDKNIAKNKVKVSKTLGARKIVGKKSSSIEVKEKNVKCTHQGCSYKFSTDEIMQQHAICHTDTQNAQLFKCNVCRDVKFSKWKPCSLHLWKEHKIDVDLLSCKICKTYKSATMVKLVTHMRVHSDNREYECPVCGKCFKQSSQLRNHRVMHLNRKSNEVPRWYTSKTCELCGKTYADSKCLKNHMQAVHSKLRPYVCNVCGHSSARKAMLQMHLRQHTGDKPYSCELCDYKTGDHNSLRRHIMRHTGVRPYKCPHCSYSAIQSNSYKNHLRSKHPSLAGLYTCELCPFKTVNKESYMQHVGNHEKGLIKAAIQQKDDENVEVFPGNIAAAQLIYSCLGAFSKDGKTIEANLMTSSTSADGTSQTITIQIPSKDLEGSLPNGDQNLSNKNGLTLDQEDDETMHCFLAIPREEEENIDTGGITIPAEPEAAVDTAMDVEIW

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00718920;
90% Identity: iTF_00718920;
80% Identity: -