Basic Information

Insect: Euura saliciscinereae
Gene Symbol: RREB1
Assembly: GCA_018420115.1
Location: JAFFZH010015333.1:31716-38234[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.087 9.7 7.5 0.0 2 23 50 71 49 71 0.95

2 15 0.00011 0.013 16.5 0.4 2 23 87 108 86 108 0.95

3 15 4e-06 0.00045 21.1 1.5 1 23 114 137 114 137 0.98

4 15 0.014 1.6 10.0 0.2 1 23 214 238 214 238 0.95

5 15 0.73 81 4.6 6.6 2 23 244 266 244 267 0.96

6 15 0.067 7.5 7.8 0.1 1 23 456 478 456 478 0.96

7 15 3.4e-05 0.0038 18.2 0.3 1 23 487 509 487 509 0.98

8 15 0.00078 0.086 13.9 3.1 1 23 515 538 515 538 0.97

9 15 0.0024 0.27 12.4 2.0 1 23 923 946 923 946 0.95

10 15 0.00031 0.034 15.2 1.4 2 23 1228 1249 1227 1249 0.97

11 15 0.024 2.6 9.3 4.5 1 23 1255 1278 1255 1278 0.97

12 15 0.0063 0.7 11.1 1.5 1 23 1318 1342 1318 1342 0.96

13 15 5 5.6e+02 1.9 4.4 1 23 1430 1453 1430 1453 0.91

14 15 0.011 1.3 10.3 0.4 2 23 1506 1527 1505 1527 0.94

15 15 0.0086 0.96 10.6 6.0 1 23 1533 1555 1533 1555 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.087	9.7	7.5	0.0	2	23	50	71	49	71	0.95
2	15	0.00011	0.013	16.5	0.4	2	23	87	108	86	108	0.95
3	15	4e-06	0.00045	21.1	1.5	1	23	114	137	114	137	0.98
4	15	0.014	1.6	10.0	0.2	1	23	214	238	214	238	0.95
5	15	0.73	81	4.6	6.6	2	23	244	266	244	267	0.96
6	15	0.067	7.5	7.8	0.1	1	23	456	478	456	478	0.96
7	15	3.4e-05	0.0038	18.2	0.3	1	23	487	509	487	509	0.98
8	15	0.00078	0.086	13.9	3.1	1	23	515	538	515	538	0.97
9	15	0.0024	0.27	12.4	2.0	1	23	923	946	923	946	0.95
10	15	0.00031	0.034	15.2	1.4	2	23	1228	1249	1227	1249	0.97
11	15	0.024	2.6	9.3	4.5	1	23	1255	1278	1255	1278	0.97
12	15	0.0063	0.7	11.1	1.5	1	23	1318	1342	1318	1342	0.96
13	15	5	5.6e+02	1.9	4.4	1	23	1430	1453	1430	1453	0.91
14	15	0.011	1.3	10.3	0.4	2	23	1506	1527	1505	1527	0.94
15	15	0.0086	0.96	10.6	6.0	1	23	1533	1555	1533	1555	0.98

Sequence Information

Coding Sequence: ATGGCCTGTCTCGCAGGTGCCATCGCCCCTGTGCCAACCGTCCCACGTTCAGTTACCACAGACAGCGGACTGGAGCAACTTCAGAACACCGAGACACAGACGGATGTGGATACGTCAGCTTCGGTCGATCAATCCTGCTCAGCTCTCGTTTGTCCGGCGTGCTCACTAGTGCTACCGAACACTCGTGAACTCACCAATCACATACGAGACCACAACTCGCCTCGCAGTAGCGACGGAAGCGCGGCCGAGGACGAGTGCTCCTGTCGCGTTTGCGGCAAGGTACTCAGTTCAGCGAGTTCGTTGGACCGACATATCCTGGTCCATTCGGGGGAGCGACCCTTCAAGTGCAGACTCTGCGGACTCGCTTTTACCACCAACGGCAATATGCACCGACACATCAGGACTGCCCACGGTGGCAGCTCGCCTAACAGCTGTACGGATTCCGACGGTAGCAGCGACTCCGAGAGGCCCGTACCGAAACGGAGAAGGCTGGAGGAATTCAACAACAACAACGTATCGAAGAGAAAATCACCCGAGTGCGTGGAGGAACTGGATCAGGCGCAACGGAAGCACAAGAGTCTCTTGAACAATAACTCGAGAACGGAAGCGAAGAACGATCAGGTCCAGACGAGGAAGACCCACAGCTGCCCCGTCTGTGGGAGAGAGAATTTCGACACTAGCGCTCTCCTGGAGGCGCACCTCGAACGCACTCACCCGAATTATCCGGCAAAGTGTGACACCTGTAACCTGAATTTCAAGGACCATCGGGTGCTCAACCACCACCGTTCGATGGGCCATCATTCCGATCGTTCGATCGACAGTCCGACCAGGAACCTTCGGAACTCTGTCGTCGGCTTCGATGATTTGACATTCGTCGATTTCTCGTCAGGCAAATTTCCGACGATCGCTCGTGCCGTGTGCGAGAAATCACTTCATCGACCGGCATCTGGAGAAGTAGCCAGATTCCAGTGCTGCAAGTGCCTCAGAGCTTTCCCGTGCAGGACTGCTCTCGACTCGCACGAAACTGACTGTGGAAATCAGAGCTCACAGCCGAGAAGTAAAGTCGACGATCAATCGAAGAGAAACGACTTTTTTGCGGGACTTGATCTTCAGAATAAAGCCGCTCTTGCCGAGGCGAAGGAAGGCAAAGACTTGGCCGACATTCAGAGTATCATATCGTTGACGTCTGGACCAATATTGCAGAATTTTTCACGATCGGACGCCAGCACTCCGGACAACATGATAAAGATCGGGTCCAGCATCGGCTCATCCGGTTCGTCCGGAACGACATCTGCCGAAAATCACGAGGAGGAGGTGCAGGATGCGTTTTCAGCCGAGTTTCGTCGGATGAAACTTCGTGGTGAATTTCCCTGCCGACTTTGCACCGCTGTTTTTCCAAATTTGCGTGCTCTCAAAGGGCATAACCGAGCACACATGGGGGTTAGCCCAGGTACGCCGTACCCCTGCAACATGTGCCCGTACACGAGCACGGACAAAACAGCTCTGGTCAGACATCTACGATCTCACAACGGCGATCGTCCCTACGAATGCTCGCTCTGCAACTACGCATTCACAACGAAGGCAAACTGCGAACGTCACCTTCGCAACCGTCACGCCAAACTCACCCGGGAAGACGTCAAGCGATCGATCATCTATCATTCCAGCGAAGACCCGCTCTATGATCAAGCAGAAGCCCCACCGCGAGGCGTACGAGATGACACACGCCGACTCCTCGTTTATCCAACGGAGCGCGAGGAAAGTGGACGACAAAGTTCTGATGTGAAGTCCGAGATCAGGGTTATCGACGAGGCGAAACTTCGGCCGCCGGAACTTCCTGCGCGGCATACTTTGCAGTCCGGTCACTTCGATACACCCGAAATATTTCATAGAGCACAGTCTATTCAGCCGCTGGATATTATTCAAAGGCACTCGGAAAGCTTGGTGGACGTCGAGAAGCCACAGGACTTGGCATCCAAGCATTCCTTCGTGAACGACAACGACGACGACCAGGACGATAACTCCTCGGACGAAAGCGAATCACCTCTAGTCAACGAAGCCAAACGAGCGATGCACCAAAGACTACCGGATGTTCGAATGGATCTACAAACAGCCGGTGGTAACGACAGCTGCAGCGAAGACGTGCCCTTAGATCTGTCCATGGACGCTTTGGACTTGACCAAAAAGTCAAAGGTCAAAGAAAGTGCAGAAACGGTCATTCCACCCGAAGAAGCTCACAGAAGTGAAAAAGACATTTACAACGCAACGAATCAACTGCTTCTGACACAGGCTCTACTCAAGAGTGGTCAGAACCCTCAATCCACCTCTTTGCAGGAGGCGCTGCAGTACGCCAACGCTCATCTCCTGTACCGAAACTTTGGAACATTCCCACCCGCAATCGGTGCCGGACTGATACCGTCATATCTCTTCGGCCCACATCTGTTCAATCAAGACTTCGCCATGAAGAGCAGACTGCCGAAAGAATTGATCAGAGGTTTGCAGTGCAGTGGCGGCAGCTTGGTGGAACCCCAAATTCCCAGAGGTGATTTTGCAGCATCCTTCGCACAGAGCAGGGATGCGTCGTGTCACTCGGCTAGTGAGGACGCGGACTATTCTCCGAAACTGATGTCTCCGAAATTATCGAGCAAGGTAGCAACTTCTCGTGAAAAACTCGAGAACTCACCGTCGTCGAATTCCGTGAAAATGGTTATAAAGAACGGGGTTTTGATGCCCAAGCAGAAACAACGTAGATACAGAACGGAGCGACCTTTCGCCTGCGAACATTGTTCGGCCAGATTTACCCTCAGAAGCAACATGGAAAGGCATGTTAAACAACAACATCCTCAACATTGGAGCCAGAGACAACGTGGTGGTCACTCCACCAGAGGTCGACCTCCGACAAATCCACCAACCCTACTGCAAAGCCTTGGACAGCCCACGTCTCAATCGATGTCGCCTCACTATTCCAATATCCTTCCTAAAATTGACCATTCCAACTCAGTCCAGAATTACAGTAAACATTCCATCTCTGATCAAGTAAAGTACGCGATTCTGGCTCAACAATTGAAGGGCAACAAAACAGAGGAGAATGACTCTGAGGAGGAGTTAGTCATCGATGAGGAACCTATAGAAGATGAATCTGTAGAATCTCGGGCCCATGATGACGAGCCGCAACCGTTGAGTCTGTTGAGAGGAAAGCTAGAGGATCGAAGTGACTTCAGCAAAGACAACATTATGAAACAGCACGTAAAAGATTTTTCTAAAGAATATCTTGTACAACTTCAGGAGCAACATCTCGAAAGATTAAAACGATACGAGGACGCAAAATTGTACGAGTCAAACGCAGACGATCATTCCGATAAAGACGTTAACGATGAGCAAGAAGAAAAAGTCCCGAAGGAACCTAAGAAATCTGATGCTGAAGATGCAGTAGAAACTGAAGAAGAGACAGAAAAAAACGAGGACGGTGTTGTTGATCTTGCCAGTGTCTCCAGGCTGTTGAACAACGCGTCGCAACCGTACCGGCAATTCCAACCTCAGGACCTGAGCGACGAGGAAGAGGGGTTAGTCGCTTCAACGAGCGAAGGTAATAACTCCGGAAGTGACGAGAAGTCGGACTCCGGAAACTCCGAGTCTATTCCCGGTAAGAAAAAGTCAGCGTACTCCTTGGCACCGAACAGAGTTTCGTGCCCGTACTGTCACAGGAAATTCCCATGGACATCATCGCTGAGACGACACATCTTAACGCACACAGGTCAAAAGCCTTATAAGTGCACGTATTGCCCATTGCTCTTCACGACAAAGTCAAACTGCGATCGTCACCTATTGCGAAAACACGTGAACGCTAGTGCCAATAACCAGGCACAATCATCGGCGGCATCTTCGTCGCCCGAGACATCTACGGCCTTGGTGAACAGCAACGCATTTGCCATGAGAAACGTCCCGGAAAGACCTTACAAGTGTAGCCAATGTCCGAGCTCGACCTTCTCGACTTTGGGAAACCTGAAGAAACACCTGTCCTCGAAACATACAACTGGTGGGAACTCTAGGTCGCACAGTCCACTCAGCGACCCTCAAAACAGTCCGAACGAATCCACGAAACAAAACGATCAAAGCGGCTATGAAAGTCCTTCGTCGAGCATCGAAGAACCCGTTCGTACTGCGTCCAGCATTGCAGAGGAGAGCCATAAGGCCACGCCAAACACCTCGACTAGCGCCGAGACACCACAATCCGTGAAAACCTCCCCGGAGTGTGGGTCCACAGTGTCCTCGTGCTCCTCCGAGTTACCATTCAAGTGTCACCTCTGCGACGGAAGTTTTGCGGAAAGGCAAGACTGCCTGGAGCATATCAAACACGACCACAGATCCGAGTACGAGCTACTGCTGACTAAAGGCGCCTTGGACATGGCCGCTGAGACGGAAACCCACCCAGAAGAGCAGCAGCAACCTCCCCAACAACATTGCGAGGACGGAGAGGGCCAACGCGGCAAGTTCCCGGATTACGCCAACAGAAAGGTTGTATGCGCGTTTTGTATGCGCCGGTTTTGGTCCGCCGAAGATCTCAGACGACACATGCGAACACATACGGGGGAGAGACCATTCTCCTGCGACATTTGTCGTCGGAAATTTACCCTGAAGCACAGTATGCTGCGACATCGTAAAAAGCACGGTTCTATCCGTTCTTCGATCTACACTGGAACCAGCGGAGACGAGGAAGGCTCTCCGACTACGACCAGTATGAACAACAATAATAACAATAATAAAAACAATAATACCGTTAAAACACAAGACGCGACCCTTCCCAGTACGGCACCCGGAGAAGCAACTCCCGTACGATTTGGAAATCACGAAAAACTTGCCAGTTTATCCGGCAAACTTGCTAGCCTACAAAACAACAACAACAATGTTGAGGGTGAAGAAGAAATTGACTTGATCTCAAATTTGTTGGACATTAGAGACAAAACCCTTATCGACAGGATGTTGCAAGCTTCTCCCGCCGACGCGGCCAAAATACTCGGCCTACAAAGAGGCAACGAATAG
Protein Sequence: MACLAGAIAPVPTVPRSVTTDSGLEQLQNTETQTDVDTSASVDQSCSALVCPACSLVLPNTRELTNHIRDHNSPRSSDGSAAEDECSCRVCGKVLSSASSLDRHILVHSGERPFKCRLCGLAFTTNGNMHRHIRTAHGGSSPNSCTDSDGSSDSERPVPKRRRLEEFNNNNVSKRKSPECVEELDQAQRKHKSLLNNNSRTEAKNDQVQTRKTHSCPVCGRENFDTSALLEAHLERTHPNYPAKCDTCNLNFKDHRVLNHHRSMGHHSDRSIDSPTRNLRNSVVGFDDLTFVDFSSGKFPTIARAVCEKSLHRPASGEVARFQCCKCLRAFPCRTALDSHETDCGNQSSQPRSKVDDQSKRNDFFAGLDLQNKAALAEAKEGKDLADIQSIISLTSGPILQNFSRSDASTPDNMIKIGSSIGSSGSSGTTSAENHEEEVQDAFSAEFRRMKLRGEFPCRLCTAVFPNLRALKGHNRAHMGVSPGTPYPCNMCPYTSTDKTALVRHLRSHNGDRPYECSLCNYAFTTKANCERHLRNRHAKLTREDVKRSIIYHSSEDPLYDQAEAPPRGVRDDTRRLLVYPTEREESGRQSSDVKSEIRVIDEAKLRPPELPARHTLQSGHFDTPEIFHRAQSIQPLDIIQRHSESLVDVEKPQDLASKHSFVNDNDDDQDDNSSDESESPLVNEAKRAMHQRLPDVRMDLQTAGGNDSCSEDVPLDLSMDALDLTKKSKVKESAETVIPPEEAHRSEKDIYNATNQLLLTQALLKSGQNPQSTSLQEALQYANAHLLYRNFGTFPPAIGAGLIPSYLFGPHLFNQDFAMKSRLPKELIRGLQCSGGSLVEPQIPRGDFAASFAQSRDASCHSASEDADYSPKLMSPKLSSKVATSREKLENSPSSNSVKMVIKNGVLMPKQKQRRYRTERPFACEHCSARFTLRSNMERHVKQQHPQHWSQRQRGGHSTRGRPPTNPPTLLQSLGQPTSQSMSPHYSNILPKIDHSNSVQNYSKHSISDQVKYAILAQQLKGNKTEENDSEEELVIDEEPIEDESVESRAHDDEPQPLSLLRGKLEDRSDFSKDNIMKQHVKDFSKEYLVQLQEQHLERLKRYEDAKLYESNADDHSDKDVNDEQEEKVPKEPKKSDAEDAVETEEETEKNEDGVVDLASVSRLLNNASQPYRQFQPQDLSDEEEGLVASTSEGNNSGSDEKSDSGNSESIPGKKKSAYSLAPNRVSCPYCHRKFPWTSSLRRHILTHTGQKPYKCTYCPLLFTTKSNCDRHLLRKHVNASANNQAQSSAASSSPETSTALVNSNAFAMRNVPERPYKCSQCPSSTFSTLGNLKKHLSSKHTTGGNSRSHSPLSDPQNSPNESTKQNDQSGYESPSSSIEEPVRTASSIAEESHKATPNTSTSAETPQSVKTSPECGSTVSSCSSELPFKCHLCDGSFAERQDCLEHIKHDHRSEYELLLTKGALDMAAETETHPEEQQQPPQQHCEDGEGQRGKFPDYANRKVVCAFCMRRFWSAEDLRRHMRTHTGERPFSCDICRRKFTLKHSMLRHRKKHGSIRSSIYTGTSGDEEGSPTTTSMNNNNNNNKNNNTVKTQDATLPSTAPGEATPVRFGNHEKLASLSGKLASLQNNNNNVEGEEEIDLISNLLDIRDKTLIDRMLQASPADAAKILGLQRGNE

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00939029;
90% Identity: iTF_00718883;
80% Identity: -