Esal001469.1
Basic Information
- Insect
- Euura saliciscinereae
- Gene Symbol
- -
- Assembly
- GCA_018420115.1
- Location
- JAFFZH010015000.1:65910-68806[+]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 15 0.00056 0.063 14.4 1.1 2 23 416 438 415 438 0.95 2 15 0.012 1.4 10.1 6.2 1 23 444 467 444 467 0.94 3 15 0.049 5.4 8.3 1.2 1 23 472 495 472 495 0.97 4 15 8.1e-06 0.0009 20.2 2.8 1 23 518 541 518 541 0.97 5 15 0.0092 1 10.6 1.6 1 23 546 568 546 568 0.98 6 15 2.6e-05 0.0028 18.6 0.7 1 23 574 596 574 596 0.98 7 15 0.0003 0.033 15.2 0.3 1 23 609 631 609 631 0.98 8 15 2.7 3e+02 2.8 0.3 2 23 645 667 644 667 0.94 9 15 0.16 18 6.6 0.1 1 23 674 699 674 699 0.91 10 15 1.7e-05 0.0019 19.2 4.2 1 23 711 734 711 734 0.95 11 15 2.8e-05 0.0031 18.5 0.6 1 23 739 762 739 762 0.96 12 15 8.6 9.5e+02 1.2 0.2 1 9 782 790 782 804 0.80 13 15 0.0051 0.56 11.4 3.0 1 21 821 841 821 844 0.90 14 15 0.0001 0.011 16.7 0.5 1 23 862 885 862 885 0.96 15 15 0.018 2 9.7 4.8 1 23 899 921 899 921 0.94
Sequence Information
- Coding Sequence
- ATGGAATCAACGACACAATGCAGTTACATCGGATGTGATAAACCGNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNNAGAAACGCCGGTCTTTGTGTAAAGTGGTTGATAAACAGCGGACGCGAAGATCTGCTAACTTACGAAGCAAACATTTTAGAATCAATGAAACTCGCGTTCTGCGACGATCATTTCAACGATCGCGACTACAACAACCGCGGAGATTTGAAGGAGGCCACTGTACCAATCCAGTACTGGGATCTCGGCTACGCCTGCGAGCTCGGAGAAATCAGAGAAAACGATATGAAACAGAGACTTGGAAACAACAGCGAAGACAGTTTTACGAGCACCGACTCCGCGGGGAATGACAATGATTCCGAAATCGATACGGACGACGAATTCCGGACACAGTTGGGTAACGAGATAGAGGCGCTGTTGAATTCCGTACAGAATTCCCACGGACGGTCCAAACCCAGGGGGAAACCCGGCTTGGGACAGACTCTGAAAAGTTTTTATAGAAAATTGAATATCAAAGGAGACAGGCGCCGGAAGGGCCGGACTGCGACCAGCGACGATTTGGCTGGGTTTAGGAGAGCGACAAAAAACATGTGCAGAACGTGCGCAAAGAACAAGACAAATCTCGTCGATATAGCCGGGAAAACAGGGGACTCTGATATCGATATCGTTACCAAGTTGAAACTGCTGATAGAAATCAAAGACCAGGATGTATTCCCCGATAAAATTTGCCAGCAATGTTTAACAAAGCTGGAAGACTCGTATAAATTCTTTCAACAAATATACAACGCCGATAATATCCTTCGCGACATGCTGCTAGACCACAAAAGAACGGCAAAGCCTGGTTCCACTAGGAGAAAGTACAACGGTCGCATAGCAAAGCTCAAATCGTTCGACGTCAAGCGCGAAGACGATTGCCTGGAGGTGAACGATATGCCGTTTAAAAGTAACAGCCTGAAAAGACCGTGGACGCTGGGCAGTAGCTTGGATAACGAAGACGCCGATTCTGACGTCATTGATGAGAATCTTTGCAAGATTAAGAAGGACAAAAGCAGCGAAAATGATGAAAATACAGTCAGCTATTTGTTGTCGGATTTTTGTAACGACGCGGAGCTCAATTGGCTCGACGTGGTCGGAATTATGGAGAAGCATAACAAACCTGAACCATATGCTTTGGAAAATACTAACGGAACCGACGAAGCGTCCGCTGCCTCTGGTCCTCTCAGAATTTCTTGCAAATATTGCGACAGCACTTTCAGACTTAGGAGACAATTAAAAACGCATATAACAGTCGATCATCTCCAGCCGACTAATTACATGTGCGAACATTGCAGTATTTGTTGCAAGACCAAAGAAGAATTGTCGCAACATCAAGCGCAAACTCATTCTCAAAAGATTTACAAATGCGATTGTTGCGTCGCGACCTTCGGAAAGAAGGGAGACCTACGTTTGCACATACAAAAAATTCACTCGCCGGATAAAAACGGAACTCAAACCAACGATCAGACTACCGTAATTTCTGATCCAGATGAAACTTTCACCTGTAACGATTGCGAGAAAGTATTTTCATCCAAACAAACGCTCTCCAATCATATTCACAGATTGCATCCTATATTCGCTTACACTTGCGCAATTTGTAACAAAGTAACGCACAGCGAAGCCGATACCTACAAGCACATGACCACTCATGACAAGTCTCCGCTTTTTCCCTGCCTGGATTGCGGCAAGATGTTTTACAGCATGGAGAAATTGGAAAAGCACACGAGTACCCACGGCAAGAGTACGTCCAAGAAACGGAAGAGAGTCTGGTTCCACTGTCAGCTGTGCGACGCGTCGTACAGGATACCCGACGAGTTGATCAAGCACATAGAAACCCACTCGCCCGAGGACTGGGAGAATTACCGGAACAAGATATTATACTGCGGGGAATGCAACGCGAGATTGATTGGCAAAGAAAAATTCCTTATTCACAAGATGAGGTATCATTTGTCAAAAAGAGGTGATTTCATCTGCCTACTATGCGACGATACTCCTCAAGACTTTAAATCACTGGAGGAGTACGAGAAACACATAAACTCGCATTGCAATGAAATAAGACGCGCGGCACCGCGGAGGTTCAAATGCGAGCATTGCGACAAAGCCTTCAAGTCAAACTCGCACATGATAAATCACGTGGATTCTTTTCACTCCGACGTAACGCATACCTGCCCGATATGCGATTTGAAAGTGAAGCGCAAGGGAAATCTGAAGGATCACATCGATCGGGTTCATAATAGTAAAAATAAAAATCAAGCCGGTACGATAGAAGTTTACCTAGGAGATAAACGTTATCCTTGTCGTATTTGCGGGGAAAAATTATTGACGACCAAGCAGAGAAACGATCACGAAGACGAGCACCAAGAACCCTGCAAAGATCTTGAAAAAATGTTTCCGTGGACTCAGAGATACTCCTGCGATCATTGCGGCATGAAGTTTTACTACATTCACAAATTACGGCAACACCTCGTCGACGTTCACGAAGACAAGGAAAAGGCGGCTATTATCGAAACGTTGGAAAAGAATCGAAAGTTCAGATGCACAGAGTGCGAAGCGACTTTCAAACACGCGAGCGGCTTGGACACGCACATTAAGGGGATTCACTCTGGCGCCGTACATTCAATCACACATGACGAACTGTTATACAAATGCCAACATTGCGACAAGCAGTTTAAAAACGACGAGACACGGAAGAGCCACGAATCGAATCATAGCTCCGACAACCCGAAACGATTCAAAGAGGATGTGTCCAACAAGGATAAAGAATGA
- Protein Sequence
- MESTTQCSYIGCDKPXXXXXXXXXXXXRNAGLCVKWLINSGREDLLTYEANILESMKLAFCDDHFNDRDYNNRGDLKEATVPIQYWDLGYACELGEIRENDMKQRLGNNSEDSFTSTDSAGNDNDSEIDTDDEFRTQLGNEIEALLNSVQNSHGRSKPRGKPGLGQTLKSFYRKLNIKGDRRRKGRTATSDDLAGFRRATKNMCRTCAKNKTNLVDIAGKTGDSDIDIVTKLKLLIEIKDQDVFPDKICQQCLTKLEDSYKFFQQIYNADNILRDMLLDHKRTAKPGSTRRKYNGRIAKLKSFDVKREDDCLEVNDMPFKSNSLKRPWTLGSSLDNEDADSDVIDENLCKIKKDKSSENDENTVSYLLSDFCNDAELNWLDVVGIMEKHNKPEPYALENTNGTDEASAASGPLRISCKYCDSTFRLRRQLKTHITVDHLQPTNYMCEHCSICCKTKEELSQHQAQTHSQKIYKCDCCVATFGKKGDLRLHIQKIHSPDKNGTQTNDQTTVISDPDETFTCNDCEKVFSSKQTLSNHIHRLHPIFAYTCAICNKVTHSEADTYKHMTTHDKSPLFPCLDCGKMFYSMEKLEKHTSTHGKSTSKKRKRVWFHCQLCDASYRIPDELIKHIETHSPEDWENYRNKILYCGECNARLIGKEKFLIHKMRYHLSKRGDFICLLCDDTPQDFKSLEEYEKHINSHCNEIRRAAPRRFKCEHCDKAFKSNSHMINHVDSFHSDVTHTCPICDLKVKRKGNLKDHIDRVHNSKNKNQAGTIEVYLGDKRYPCRICGEKLLTTKQRNDHEDEHQEPCKDLEKMFPWTQRYSCDHCGMKFYYIHKLRQHLVDVHEDKEKAAIIETLEKNRKFRCTECEATFKHASGLDTHIKGIHSGAVHSITHDELLYKCQHCDKQFKNDETRKSHESNHSSDNPKRFKEDVSNKDKE
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00718891;
- 90% Identity
- iTF_00718891;
- 80% Identity
- -