Basic Information

Gene Symbol
Hivep1
Assembly
GCA_018420115.1
Location
JAFFZH010015154.1:66906-73329[-]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 9 6.7e-05 0.0074 17.3 0.6 1 23 69 91 69 91 0.98
2 9 0.019 2.1 9.6 2.1 1 21 97 117 97 121 0.87
3 9 0.00076 0.085 13.9 0.3 1 21 310 330 310 331 0.96
4 9 1.5e-06 0.00017 22.5 1.6 1 23 1004 1026 1004 1026 0.99
5 9 6.7e-06 0.00074 20.4 5.2 1 23 1032 1056 1032 1056 0.92
6 9 4.6e-06 0.00051 20.9 0.1 2 23 1612 1633 1611 1633 0.97
7 9 0.0008 0.089 13.9 1.8 1 23 1639 1663 1639 1663 0.92
8 9 0.0014 0.15 13.1 3.3 1 23 1684 1708 1684 1708 0.93
9 9 0.0087 0.97 10.6 0.2 1 23 1875 1898 1875 1898 0.90

Sequence Information

Coding Sequence
ATGGCAGCAACGACGGAGGCGGCAGTCGTCGTTCAGGAAACTCCGCTTCGGGAAGTGGCTTCCGAGAATCGAGTACCTGCCGCAGGAAGTTGGAGAGAGAAGGAGAATCCCGCTGGACCAGGGGAAGACTCTGCGACAAAGACAAAGACTGAAGCATCGCCTGAACCCGAGGGAACCGAAAGCACCGAGAACAGAAAGAGCGGATACGTTTGTCCATACTGTAAATTGTCCTGCGCGAAACCCAGCGTTCTTCAAAAGCATATCAGAGCCCATACCAACGAGAGACCGTACCCATGTGGGCCATGCGGATTCGCGTTCAAGACGAGATCAAACCTCTACAAGCACTGCAGGTCCAGGGCGCACGCGCTCAAGATGGAGGGTGGTGACTCGAGCAAGGTCTCCGAAGACTCTGACATCAGTCTTTCGGACAGTGCCAGTAATGGGACAGGGACTCCACCGCCGCCTGCATCATCCTCATCCGTCTCTGTTTCGGCTGGAAAGACGGTGAAGACTGGGAAGATCTACAAGCCAAAGTTCCATACCGCATTGAACAGCATCGTAAACGACGTCGAAGTCTCTTCCGTGTGTTCATCAAACTCTTCGACGACGTCGAACTCGAAACCTAATGCGGAACAGGTGCAGGAGCATATCGACAAGATAATAAACGCCAATCAGGCCATAGTCGAAGCCGTTGATCCCAGACTTCACAAGCTAATGCTGAGACAGCAGAGTCTGGTCGAACCACCGAAGTACACGGTTGAACAGCCCCTCAATCTATCCTCCGCCGAGGAAAGTTCTCATAGAAAAAGATGCTACAGTGAAAGTTTTGCGCTGGAAAGAGAGCCGAGAGAGCCACAAAATGACGGCTTGATCATCAAGGATCTTCTGATGAAGAGCAAAGGAGAGCTTGGCATCAACGGAGACACCTTTTCCTGTCCTGCCTGCAAGACTTCCTTCACCAGTATCGACAACCTTGAAACGCATCGTCGATACTATTGCACCGGAGCTCCGTCTCCTAGGAGGCACGAGTTTCAGCTGGACCTTGAGAAAAGGGACACCGAGTTTGACCTTAAACCAGAGTACTACACCCTTCAGCCGCTTCCCTCGCCCGGTCCGCTCCTGGGTAACACTAGACTAGTAGACTATGCTCCACCGAGTAAACAGCGCTCTGAATCGGCGCCAACGACGCTCAGGTCTCTGGAAGAACTTTCGAAATACCCTCGGCCAAATTCCCTCCAGATGTTTGGAGGGGAGGTCAGGATCCTTGACAACACCGGAGAGACGAAGACCATGCGGATCGAACCTCGTCAGACAAACTCACCCGATCACCAGGTCAACAAGGGCAGCGCTTCGGAGACTTCCTCGATTGTCGTCAGATCCGGTCTTCACTCTGGAGGGACGATGGTCCACAAGCCGCCAGGGACTCCGGCCAGCACTCCCAGCGGCATTTCGCTACCGAACACACCCAAGATGTTGGCACCTATCATACCTAACATATCAACGCCTAACGTAGCCCCGACGATATCATGTTATAGTTATATAGAACCGAACCTGATACCACTGACCAATATTACTGCCTACAATCCCCTGACCCTGCCGCAAGCCGGAATAGCCGGAATATTGCACGGCGGTAAGGTCATACCCTATGTCCCGGGAATGCCGGGTCCCCACAGTCTAGTCGCTTCCGAAATTTCGGTCAGCGTTCCAAGCGCCGAATCATCAGGGTACAAAGTCATCCCAGGTATACCGGGACTCCACGTCGTTACACAACCCCTGGACCTTGCAAGTCCTGTTAAAATCCAGACACCAAACATTCCCGGGATGCCCGGACCACATTCAAACATCCAAATCCCGCAGCCTTTGGACCTCGCCAGTCCAGCCAAAGAGTTCAAACTATGTTTCAAGACCCCTAATAGCGAGAGTCTCAGGGGTGGCTTGATGAGTCCTAGTCTTAAATGCGATACAAACTCCGAAAAGTTCAGAAGCAGGGTCCCGACACCTGGAACACCTCTGAGATACAAGAGCGTCGAGAGCCCGAGAGAAAGGCGGAAGTTTGTTTATCCTCCGGACAAAAGTCCAAAGTCCGACAAGACTTTCAGCTACCCTAATGGGACAGATAATACGAATTTCAATTACCCAAAGGTGAGATACTCGCCCAAACCCTTTCCAGAGAGCCGGAAGAGAGTGGGGCCAGAATTAGACCCCCTGAGGCAAAGTCCCGTGCCAGAGAACGGTCGTACGAAAGCTGTGGTAATGAATCTTCCAGAACCAGTAGCTAACAAGCAGAGTAAATCATCAGTGGCCACAATAAATGGGACAAAATTAAGGCCCGAAACTATGGCACCGATGATAACTGTCAATCTAGATTCTTCCAGTACAGAATTAGTGCCAAATAAAATGAACCCGATTAGGGATTCGGATAGAGTAGATGAGAAACCAGACAAGGAGTCTCTAGAGGACTCGGTGGATGAGAGTAACACAAAGTTCTTGAGGCCCACATCGCTTCCTTTGAAGCCTGGTACCTTCACGCCGAAGAGGCACCATGGGATAACGCCAACGGCTAATACGCTTCCATTGATAAGCCCCGAGACCCCAAGGCCGAGGAAATCTTATGGTCAATTGTACCTGAACGGACATGCCTACACTTATTTGGGGCTTAAATGTTCGACTAGAGTTTTTTACTGCACATTGAACAGACCGCAGCCCATGTACGTCTCCCAGCAGCACGGGCTCTCCATGTATTCTAATTGGAAAATCTGCAAGGAGGCTCCTCCAGATCTTGATATGGCACATTACGACTCCAGACACAGGCCTATGAGCTATACTACTGCTTGCAAAAAGCAGGAGGATATCCTCACACACTCGTCGCAGCGGCCCAACACTCCTGCTAACACGGAGAATAGCTCCGAGAATGACAGTCAGGAGAAGACTAAGAGAGTTAAGATCTTTGACGGTGGATTCGAGAGCAACGAAGACTACATCTATGTCAGGGGAAGAGGACGAGGGAGGTACGTTTGCGAGGAGTGCGGTATAAGGTGCAAGAAGCCATCGATGCTGAAGAAACATATCAGAACCCACACAGACGTTAGACCATACACTTGCAAGCATTGCACATTTAGTTTTAAGACAAAGGGAAACCTGACCAAGCATATGAAGTCGAAGGCACACTACAAAAAATGTGTCGAACTAGGAGTTGTCCCAGTCCCGACGCTAGTCTGTGATGAAAACATCGACAAGGACGCAGTAGCGCGTTTGGCCGCTGGCGGCGGAAACGCGGAAGAATCATCTTCGGAGGAGGACGAAAGCGACGGAGAGGAGAGCGAAGAGTCCGGCAGCGAGGAGCACGAGGCTGCTCAGGGCCTGCTGAGCCTTTCGCAAAGAAGCGCGAGCCGATTGCCGGGGCTGCTTCCGTCCGGGAGGCCAACGACTTACCCGTACACCCTGACTTTGTCCCCCAGCACAGTCTGCAGCACGGTGACGACGAGGACGAGCAATACTGCGCCCCTGAGCAGCCAAGCGGCTGCAGTTATCCAAAGTGAATTGTCCCACAGGTATTATTTTCCCTCGAATCGATCGGTTCAGGAAAATGTGCCGAGAACTAGCGTGATTATACAGTCTTCCAAGAAAAGTGTGCCAGAAGAAGTCGAGGACGTTGGAGTTGCAGAGAGTCAATCGAATTCGTCCCAGCCCATAGATCTTACAACGAAACAGATAATTTCGCCGGTTGAGAGACGGGGGAAGACGTCGGACATCCTGACTCCAGTTTCAGAGCCTGCTTTCATGCAGACAATAGTTCAGAGCATGGAGAGACTCCCGGTTCAAGGGAGAGAATGGAAGTCCGAGGCGCAGGGTCAGATGTTACAGGCCTATTTGACCGAGCGCCACGTTATGGACAGCAAAATGAAGCTGCAGTACAGAGTAGGGAGTTCGAAAGGGGACAAGAACGCAAGCGAGAAAGAAATCCAGTACCTGAAACAGCAGGACGTCATTAGATCACGGAATATCGAGCTCAATGGCGTCGCTACGGTCACCTACACCGATCCCATTAAAATACAGCAGAACATTCTCGAGCCGAGGATGAAGAACGTACAGGAGGATCTACAGCTGGAGATGAGGGAGAAGATCGCCTACCAAAGCAGCGAGAGGAACAGGCCTTTTGACAAGGAAAACGCCCTAGAGCCGGAGAAGAGAAACCATTTCGCGATCGATCTTCCCATCAGAAGCTCGCCCAGCATCGAACCCCAGTCTCCGAGACATTTCAACATCGAGATGATAAACCGGAATTCGGAACAGAGGATCAAAACCGAGATAGACAGAAGCCAGATGTTCAACGCGATGAAGATGATGAGCGAGGTCGAAAATCATAGCCAAAATCAAGAGGCGAGACCTCCGAGCAGAGAGAGCAGACTACAGAGCCAAGATCTCAGGGTCGTTCCCAGCAACCAAGACTTCAGACTCTCTACCACCCAGGAATTTAAGCCTGTTAATCAAGAGCAGAGAAATCTGAGCTCTCCAGGGCCTCCGAAGACCCAGGAAGCCAGGAATAATCCAGACCAAAAATCCTCTCAACAGGCTCTCGAAATTCCGCGAGTTGCTTCTGACAAAAGTCCTCAGAATCCTGAGACCAGGAGCTCCGAACGTCTGGAAGTTAAGCAAAGCATGGCGGAGAGCATCAAGCACTCGGTAGCGAGAAAGATGGTCGTCGGAGGGCCGGGTTTTAGGTCGCCATCTCCGCCCGGTGGGAGCGGAAAACCTCAGGCTGAATTTTTACAGCCTTCTTCCGGCCCTGCTCCAAATTACGTCAGTTACAGCGTTACAGAGGACGGCAGAAGCGTCTGCGGCATATGCAACAAGGTCTTCAACAAACCCAGCCAGCTCAGGCTACACATCAATATACACTACTTTGAAAGACCATTCAGGTGCGAGAGCTGCGCGGTATCCTTCAGGACCAAGGGACACCTCACCAAACACGAACGATCCGTTTCCCACCATAACAAAGTGAGCATGACGTCGACCTTTGGTGCAGCGACCACAAGCAATCCTCGCCCGTTCAAGTGCACAGACTGTAAAATAGCCTTCAGGATCCATGGGCACCTAGCCAAGCACCTGCGCAGCAAAATGCACATCATGAAACTTGAGTGCTTAGGAAAACTACCATTCGGAACTTACGCGGAGATGGAACGATCTGGCATCAATCTAAACGACATCGATACCAGCGACTGTGACAACAGTCTCACAAGTCTACAGAATTTGGCGCAAAAACTCTACGAGAAAGATCCAAGCAAGATGGGGCAGTGGGACGCGGAAATGATTCCAAGTCAGGGAGCCTCCGGCGGTGAGACCTCGTCCGACGAGGGCGAGCCGATCCCTTTGCATCCGATGCACCAGTACCCGTCTCAGTTATCGATATCGGACGGTGATTTATCGCGGGGTTATCACATGCCGATACTAGTGAGTGAGGAATCGAAGCCAGTGACTGATATTCGTCACGCTAATCCTCAGTTCAGTAACCAGAGTCGACTGGGGGATTTTGGGACGGGTGAGAGGCAGCTGAGTCGAGGGTCTAGAGCTGGGGACAGAGCGGAGGAAACTAGGGTAACTGAATCGTCTGTTGATCAGATGTACAAATGCACGATTTGCTCGATCTCTCTTCGATCGATGAGCGAACTCCAGGTCCACAATTTCGTAGAGCATAATATAGAGGCTGAAGGGTCGAGCGAGGGCGGGGACGCAGAAGGTAGGCAGAAAAGGGTGAACGAGGATATCGGAGTTAGGGAGGACCGGAAGAGACAGAAAATCGTCGACGATACATAG
Protein Sequence
MAATTEAAVVVQETPLREVASENRVPAAGSWREKENPAGPGEDSATKTKTEASPEPEGTESTENRKSGYVCPYCKLSCAKPSVLQKHIRAHTNERPYPCGPCGFAFKTRSNLYKHCRSRAHALKMEGGDSSKVSEDSDISLSDSASNGTGTPPPPASSSSVSVSAGKTVKTGKIYKPKFHTALNSIVNDVEVSSVCSSNSSTTSNSKPNAEQVQEHIDKIINANQAIVEAVDPRLHKLMLRQQSLVEPPKYTVEQPLNLSSAEESSHRKRCYSESFALEREPREPQNDGLIIKDLLMKSKGELGINGDTFSCPACKTSFTSIDNLETHRRYYCTGAPSPRRHEFQLDLEKRDTEFDLKPEYYTLQPLPSPGPLLGNTRLVDYAPPSKQRSESAPTTLRSLEELSKYPRPNSLQMFGGEVRILDNTGETKTMRIEPRQTNSPDHQVNKGSASETSSIVVRSGLHSGGTMVHKPPGTPASTPSGISLPNTPKMLAPIIPNISTPNVAPTISCYSYIEPNLIPLTNITAYNPLTLPQAGIAGILHGGKVIPYVPGMPGPHSLVASEISVSVPSAESSGYKVIPGIPGLHVVTQPLDLASPVKIQTPNIPGMPGPHSNIQIPQPLDLASPAKEFKLCFKTPNSESLRGGLMSPSLKCDTNSEKFRSRVPTPGTPLRYKSVESPRERRKFVYPPDKSPKSDKTFSYPNGTDNTNFNYPKVRYSPKPFPESRKRVGPELDPLRQSPVPENGRTKAVVMNLPEPVANKQSKSSVATINGTKLRPETMAPMITVNLDSSSTELVPNKMNPIRDSDRVDEKPDKESLEDSVDESNTKFLRPTSLPLKPGTFTPKRHHGITPTANTLPLISPETPRPRKSYGQLYLNGHAYTYLGLKCSTRVFYCTLNRPQPMYVSQQHGLSMYSNWKICKEAPPDLDMAHYDSRHRPMSYTTACKKQEDILTHSSQRPNTPANTENSSENDSQEKTKRVKIFDGGFESNEDYIYVRGRGRGRYVCEECGIRCKKPSMLKKHIRTHTDVRPYTCKHCTFSFKTKGNLTKHMKSKAHYKKCVELGVVPVPTLVCDENIDKDAVARLAAGGGNAEESSSEEDESDGEESEESGSEEHEAAQGLLSLSQRSASRLPGLLPSGRPTTYPYTLTLSPSTVCSTVTTRTSNTAPLSSQAAAVIQSELSHRYYFPSNRSVQENVPRTSVIIQSSKKSVPEEVEDVGVAESQSNSSQPIDLTTKQIISPVERRGKTSDILTPVSEPAFMQTIVQSMERLPVQGREWKSEAQGQMLQAYLTERHVMDSKMKLQYRVGSSKGDKNASEKEIQYLKQQDVIRSRNIELNGVATVTYTDPIKIQQNILEPRMKNVQEDLQLEMREKIAYQSSERNRPFDKENALEPEKRNHFAIDLPIRSSPSIEPQSPRHFNIEMINRNSEQRIKTEIDRSQMFNAMKMMSEVENHSQNQEARPPSRESRLQSQDLRVVPSNQDFRLSTTQEFKPVNQEQRNLSSPGPPKTQEARNNPDQKSSQQALEIPRVASDKSPQNPETRSSERLEVKQSMAESIKHSVARKMVVGGPGFRSPSPPGGSGKPQAEFLQPSSGPAPNYVSYSVTEDGRSVCGICNKVFNKPSQLRLHINIHYFERPFRCESCAVSFRTKGHLTKHERSVSHHNKVSMTSTFGAATTSNPRPFKCTDCKIAFRIHGHLAKHLRSKMHIMKLECLGKLPFGTYAEMERSGINLNDIDTSDCDNSLTSLQNLAQKLYEKDPSKMGQWDAEMIPSQGASGGETSSDEGEPIPLHPMHQYPSQLSISDGDLSRGYHMPILVSEESKPVTDIRHANPQFSNQSRLGDFGTGERQLSRGSRAGDRAEETRVTESSVDQMYKCTICSISLRSMSELQVHNFVEHNIEAEGSSEGGDAEGRQKRVNEDIGVREDRKRQKIVDDT

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
iTF_00718870;
90% Identity
iTF_00718870;
80% Identity
-