Basic Information

Insect: Euura saliciscinereae
Gene Symbol: -
Assembly: GCA_018420115.1
Location: JAFFZH010014310.1:48173-50305[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 10 0.46 51 5.2 0.1 1 20 217 236 217 237 0.95

2 10 2.5e-06 0.00027 21.8 1.2 1 23 364 386 364 386 0.94

3 10 0.031 3.4 8.9 4.2 1 23 392 414 392 414 0.94

4 10 5.1e-06 0.00057 20.8 1.7 1 23 419 441 419 441 0.99

5 10 6.2e-06 0.00068 20.5 0.3 1 23 447 469 447 469 0.97

6 10 1.5e-06 0.00017 22.5 0.7 1 23 475 497 475 497 0.98

7 10 0.00068 0.076 14.1 1.6 1 23 504 526 504 526 0.94

8 10 0.00092 0.1 13.7 3.4 2 23 533 555 533 555 0.97

9 10 0.001 0.12 13.5 3.3 1 23 561 583 561 583 0.98

10 10 1.6e-05 0.0018 19.2 2.1 1 23 589 612 589 612 0.94

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	10	0.46	51	5.2	0.1	1	20	217	236	217	237	0.95
2	10	2.5e-06	0.00027	21.8	1.2	1	23	364	386	364	386	0.94
3	10	0.031	3.4	8.9	4.2	1	23	392	414	392	414	0.94
4	10	5.1e-06	0.00057	20.8	1.7	1	23	419	441	419	441	0.99
5	10	6.2e-06	0.00068	20.5	0.3	1	23	447	469	447	469	0.97
6	10	1.5e-06	0.00017	22.5	0.7	1	23	475	497	475	497	0.98
7	10	0.00068	0.076	14.1	1.6	1	23	504	526	504	526	0.94
8	10	0.00092	0.1	13.7	3.4	2	23	533	555	533	555	0.97
9	10	0.001	0.12	13.5	3.3	1	23	561	583	561	583	0.98
10	10	1.6e-05	0.0018	19.2	2.1	1	23	589	612	589	612	0.94

Sequence Information

Coding Sequence: ATGCGTGAGAATATGGATTTAAACAACACGTGTCGCCTGTGTTTGGGTGAATTCGATGATTCTCAATTCGCTTTGTTATTTCCGCCAAGTTATCTCAATGGAGCTTCACTCGTGATGAAAATAATGGTCTGCGTATCATTGACGGTTCAGCAGGACGATCCGTTTCCAAAGAGGATATGCAGAGTCTGCGAAGAATCGGTCAACTCCTTCTACGCCTTCAGGGAATCCTGCTCTCGGGCTTATTTTATGCTCATACAAAATTTTGGGGAGTTTAAGAACGTCGACGCGAAGCCTGACAAACCAGAGTCGATTTCACAAGCCGAAGAGTTCGAAGGATCTGAAGAAGCTGAGAATGACGGAGCGAATAAAATATCCGAGGATATTGACTCGGAAATGAACATTCCACAACATCGCATCGATTGCCTTGAAAACGGGAAACATTCTGTAGATGACGCAGTAGCGGAGGATGACGTTGAGGCAAAATCCGACGAGGAATTGGGAGAATTAAGATCTGCCGTAGTAGAAGAAGATTCATTGACTGGTTGCAATAACGTGGATGTGGATGTGGGTGTGGATGTCGACTGTTACCAAGTTGAAGAAATTCACGAGCAGATACTCTGCGGCAAAGACGTCAAGAGATTAGTTAGGTACAAATGTTTACGCTGTGAAAATAACTTTGATGATTTAGATTCGGTCACTGCTCATTACGCGGACTATTGCCAGCCAGTAGATTTCGAGAACGTAGAACAAGCCTCGGCTGGGTCAAACGATGGAGATGAAAGCCCGAGTTACTTGGACGCGTTTGAGTATTTGGAAGAAAACTTTGAACTGGAAACCAAGGAGACGACGAGCCTGGAATATTCGAATAACGAATCCCAGATATCAGAATTGAAGAGGATCAATCCATCGGAGGAGATCGTAGAACATGACGAACCAGACCGATACGTCGAAAGCCTTGATTCTAAAAGCTCTTGCAGTTCGAACGCTGCCGCAGAAGCTTTGAACAATTCCCCTAATAAATCTCTGATTGTGAATTTAGGGATGAAACGAAAGAAGAAGAACGGTCGCTGGATCGGGGAAAAGACGGATCATCCATGTACGGAATGTGATAGAATATTTACCAGCAGTTCTCAGCTGAAGAGACACTCGGCAGTTCACACGGGAGAAAGACCCCACGTTTGCGAGGTCTGCGATCACCGTTTCTCCCAGCTAGGACAGCTGAATTTTCATAGAAAATTTCACAACAATCCCAGATATCGTTGCCATATTTGTAGCAAGCCCTTTCTCAGGCCAAGCGACATTGAAAAGCACATGCGAACGCACACTGGAGAAAAACCTTACGATTGTAAAATATGTTCAAAGTCGTTCGCCCAGCTCGGAGCCCTGCAACAACATTCGAGAGTTCATTCCGGGGAGAAACCGTACTCTTGCGAAATATGCGGAAAAAGATTCGCCCAGAAAGCAAATAAGACCAAACACGTCAAGATACACAAGGAAGGGGAGAGACCGCACACTTGTTGCATATGCGGAAGGAGCTTTTCCGAATTATCAGAGATGGAATTACACAGGGCGGGTCACGGCGGTGGGAGACCGAGAAAATGTGACTACTGCGAAGATAGTTTCAGGAAATTGTCCGACCTGAAGCATCACGTGCGGAGATTTCACACCTTCGACAGACAACACAAATGCATGTTCTGTACCAAGGAATTTTACTCGATATATAATCTGAAACAGCACGTGATGGTTCACACCGGACAGAGGCCCTACGCCTGTTCAAAATGTGATCTCAGGTTCACACAGAAGGGGAATCTGACCAAACACTTTGAGAGAAAACATTCCGAGTTTGTGGAGAAAAAGGATGGATTCATTATAGTCAACGAGAAATCGCTTTACGACGAGAACTTGATATTAGTTGAGGAAAACGCTGATAGCGAAGTCGATTTGGATGATAATTTAATTATAGAGAGGGAAGAGACGATAGAGGCGGAGACCGAAACTAATCTAAAAAGGGATCTTGCATAA
Protein Sequence: MRENMDLNNTCRLCLGEFDDSQFALLFPPSYLNGASLVMKIMVCVSLTVQQDDPFPKRICRVCEESVNSFYAFRESCSRAYFMLIQNFGEFKNVDAKPDKPESISQAEEFEGSEEAENDGANKISEDIDSEMNIPQHRIDCLENGKHSVDDAVAEDDVEAKSDEELGELRSAVVEEDSLTGCNNVDVDVGVDVDCYQVEEIHEQILCGKDVKRLVRYKCLRCENNFDDLDSVTAHYADYCQPVDFENVEQASAGSNDGDESPSYLDAFEYLEENFELETKETTSLEYSNNESQISELKRINPSEEIVEHDEPDRYVESLDSKSSCSSNAAAEALNNSPNKSLIVNLGMKRKKKNGRWIGEKTDHPCTECDRIFTSSSQLKRHSAVHTGERPHVCEVCDHRFSQLGQLNFHRKFHNNPRYRCHICSKPFLRPSDIEKHMRTHTGEKPYDCKICSKSFAQLGALQQHSRVHSGEKPYSCEICGKRFAQKANKTKHVKIHKEGERPHTCCICGRSFSELSEMELHRAGHGGGRPRKCDYCEDSFRKLSDLKHHVRRFHTFDRQHKCMFCTKEFYSIYNLKQHVMVHTGQRPYACSKCDLRFTQKGNLTKHFERKHSEFVEKKDGFIIVNEKSLYDENLILVEENADSEVDLDDNLIIEREETIEAETETNLKRDLA

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00718859;
90% Identity: iTF_00718859;
80% Identity: -