Basic Information

Insect: Euura saliciscinereae
Gene Symbol: -
Assembly: GCA_018420115.1
Location: JAFFZH010013443.1:10046-11953[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 8 0.0095 1 10.5 1.3 2 23 239 260 238 260 0.96

2 8 0.089 9.8 7.4 0.0 1 23 266 288 266 288 0.93

3 8 1.4e-07 1.6e-05 25.7 0.3 1 23 348 370 348 370 0.98

4 8 6.2e-05 0.0069 17.4 0.6 1 23 378 400 378 400 0.95

5 8 5.9e-08 6.6e-06 26.9 0.6 1 23 410 432 410 432 0.98

6 8 0.00031 0.034 15.2 1.9 1 23 456 478 456 478 0.98

7 8 5e-07 5.5e-05 24.0 0.7 1 23 484 506 484 506 0.99

8 8 2.6e-06 0.00029 21.7 0.9 1 23 512 535 512 535 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	8	0.0095	1	10.5	1.3	2	23	239	260	238	260	0.96
2	8	0.089	9.8	7.4	0.0	1	23	266	288	266	288	0.93
3	8	1.4e-07	1.6e-05	25.7	0.3	1	23	348	370	348	370	0.98
4	8	6.2e-05	0.0069	17.4	0.6	1	23	378	400	378	400	0.95
5	8	5.9e-08	6.6e-06	26.9	0.6	1	23	410	432	410	432	0.98
6	8	0.00031	0.034	15.2	1.9	1	23	456	478	456	478	0.98
7	8	5e-07	5.5e-05	24.0	0.7	1	23	484	506	484	506	0.99
8	8	2.6e-06	0.00029	21.7	0.9	1	23	512	535	512	535	0.98

Sequence Information

Coding Sequence: ATGAAAATCATGATAACAGACTCCAAAGGGGAGTCGATATCAATAACAATAGGAGAGAACGGAAATTTCAAAGAGTTGATCAAACAGGTGGATGATAAAATGCCTGAAACCAGTTCGGAGACAGACGCCAAAGTCCTAGTTCGTTTATCCAACAACAACGGACCGACTTCTGTGTCCGAGGGGACCGATTCTGCGCTTGAATTGCTAGAGGCGCAGGTGAACCAGCTGAACTCGTGTCTGAACCAGATCCAGAGGGAATCTGGAGTCGATGCAACGATTCAATCCGACGACGAAGAAGCGGGAATTTCGGAATCTTCAAACGGTCTATCCTTGTGCAGACTCTGCGCGTCTCGGAGCGAGGACTTGATACACATATTCGGAAGCGACTGCGAACCTTACAGGAACATAATACAAAAGATAGAAGACTGTCTGCCGATCATGGTAACCAAGGGCGACACTCTTCCGAAAGAGGCGTGCAGATCGTGCTTAGAGAAGCTGGAACTCTGTCACAAGTTTTACGCTACCGTGTCCGAGGCGGAGAAACAGTTTCTTGCTCTGGGAGGCAAAATATCCTACGAATCGGAGGACGTTATGAAGTACTGCGAGACTACGGGCGGCGACGAGAGCTCGGATACCAAAGAGAGAAACCGCGGCGACGATTCTGACCAAGAAGATGGAAGAATCGATGAATCTGGAAAGAAATCCGATGGGATAAAGTGCCAGATATGCGGAGTGGCTTTTCGGACGATTCAAAACTGCCAGACGCACTCGAGGATCCATGTGACCGAGAATTACTACCCCTGCAGTCTCTGCGAGGAAATATTCACCATTGAAGAAGAGTGGAACGAACACATCGTGGATCACGATAGCGGGGAGGGAGGGGAACCAGAGAGAAAGGCGGAACTGGTCTGCGGAAAATGTGGGATGAAATTGGATCCCGAAAATGAGAGCTGCGAAGCTTGCGACGAAGTTCTAGACTCCGAGGCGACTCTGCTGGAATGTTTGGACGCGCAGGGGTCGAATGATCGGAGTAACAACGTTTTCAGTTGCGATATATGCGGAAAACGGTTCAGTTCTCAGGCTTCGGTGAACGCTCATCAAAGAATACACAGATTCGTCCAGGGAAGATCCTTCATGTGCGAGATATGTAATAAGAGATTCTACTCGGAAGACTCTTTGGAAATGCACAAAGTATCTCACGCCAAATCGAAAGCGAACGACAGTAGCTTCACTTGTTATTATTGCGGGAGGATATTCGCACAGAAAGGAAATCTGGAAAACCACATAAGGAGTCATGCAAAGTCTCCGCGGGGCGTTAAAACGAAAGAAACGACTAAACCGAAACCGGAACAAATAAATAGACCGTTTAAATGCGTCGTGTGTGAAAAGAGGTTCGACCACAGCGCGAGACTGAGAGAACACTCTCGAGTACACAGCGGAAAAAGACCTTACGAATGTTCAGTCTGTAATAAATCCTTCAAGCGTGCGAGCGCCAGAAAAGTTCACATGATTACGCACAGCGACGAGAAACCGTACAATTGCCAATTGTGCGGATCGAATTTTAGACGGTCTGGGGATCTGAGGAGGCACATACAAACGCAGCATAATCAGAAATGA
Protein Sequence: MKIMITDSKGESISITIGENGNFKELIKQVDDKMPETSSETDAKVLVRLSNNNGPTSVSEGTDSALELLEAQVNQLNSCLNQIQRESGVDATIQSDDEEAGISESSNGLSLCRLCASRSEDLIHIFGSDCEPYRNIIQKIEDCLPIMVTKGDTLPKEACRSCLEKLELCHKFYATVSEAEKQFLALGGKISYESEDVMKYCETTGGDESSDTKERNRGDDSDQEDGRIDESGKKSDGIKCQICGVAFRTIQNCQTHSRIHVTENYYPCSLCEEIFTIEEEWNEHIVDHDSGEGGEPERKAELVCGKCGMKLDPENESCEACDEVLDSEATLLECLDAQGSNDRSNNVFSCDICGKRFSSQASVNAHQRIHRFVQGRSFMCEICNKRFYSEDSLEMHKVSHAKSKANDSSFTCYYCGRIFAQKGNLENHIRSHAKSPRGVKTKETTKPKPEQINRPFKCVVCEKRFDHSARLREHSRVHSGKRPYECSVCNKSFKRASARKVHMITHSDEKPYNCQLCGSNFRRSGDLRRHIQTQHNQK

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00718851;
90% Identity: iTF_00718851;
80% Identity: -