Esal027125.1
Basic Information
- Insect
- Euura saliciscinereae
- Gene Symbol
- -
- Assembly
- GCA_018420115.1
- Location
- JAFFZH010013221.1:32364-35144[-]
Transcription Factor Domain
- TF Family
- zf-C2H2
- Domain
- zf-C2H2 domain
- PFAM
- PF00096
- TF Group
- Zinc-Coordinating Group
- Description
- The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
- Hmmscan Out
-
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc 1 13 0.001 0.11 13.6 0.1 2 20 148 166 147 167 0.94 2 13 0.00076 0.085 13.9 0.9 1 23 175 198 175 198 0.93 3 13 3.5e-05 0.0039 18.1 2.5 1 23 204 226 204 226 0.98 4 13 1.9e-05 0.0022 19.0 0.7 1 23 384 406 384 406 0.97 5 13 0.032 3.6 8.8 0.6 2 21 416 435 415 436 0.92 6 13 0.00045 0.05 14.7 2.0 1 20 459 478 459 481 0.92 7 13 0.0078 0.87 10.8 0.3 1 23 486 509 486 509 0.95 8 13 1.8e-06 0.0002 22.2 0.1 1 23 515 537 515 537 0.99 9 13 0.00088 0.097 13.8 5.4 1 23 544 566 544 566 0.98 10 13 8.5e-05 0.0094 16.9 0.4 3 23 574 594 572 594 0.97 11 13 0.00046 0.051 14.6 0.2 1 23 600 623 600 623 0.96 12 13 1.6 1.8e+02 3.5 0.4 1 23 637 659 637 659 0.87 13 13 0.00019 0.021 15.8 0.1 2 23 904 925 904 925 0.97
Sequence Information
- Coding Sequence
- ATGGAGGCGGCTGAAAATGAACAACAATATGTGGCTTTTCCCCTGTCAGCAAACATGCACGAGACGATAATATCGCACGAGGAAATATGCGAGCCTGTTATAGAAGACTGCGTACTGCCTGAGGTCATTGTCAGCGAGGTCGACTCCGGTATAACCGAGGTCGTCGAAGCGGCCGTTGAGATATTGGCCGAGAGTTCGGACCCGGAAAACGATAACGATAACGAGGACGAAGACTCGGTGTATCCGATTTACATAAAGCAGGAAGACCAGCAGCAGTACACGTCCGGCGACGACGAGTCTATGGCAGTTGAGGCTCTGCGTCAGCTAGGCGGAATGTACCCCTGCTTCAACGAGAAGAAAATATCCTGCCCAAACTGCGCCAGTCTGTTCACGCAGCTGGAGATGGCCAAGCATCACCCCACCTGCGCCGCGGTCAAATTATCCTGCACTACCTGCGGCGAAAGGTTCGAGAGGAAAATCGACCTCAATAACCACGTGGTTTGCCACCAGGTCGATCGTCCGCACGCCTGCAGGACATGCGGCAATTTGTTCAGGTCAAAGGCGAACCTGCAGTCGCACATGGCGCAGGTCCACCAGGCTGAGAGACCCCATAAATGCAATATCTGCAATTCCAACTTCCAAAGACCGTCTAGTTTGTCCAATCACATGAAGATTCATACCTACGTCGCGGGCAGAGCCATCATGCAGACTCCGCCCTCTGCGTCCAGTACCAACACGCAATCGGTCGAACCCTTCAGGAAGTGGCCTGACAACGGGGCCTCGGAGTCTCCTGGTACTCCGGTTCCTTCCGGCTCCGTACCCCCGATACCGACCTACGAAGTCACGCCCCAGGTTCACTGGTCGATTCCCACCTATAACTTTGCCAATGATCAAACGGGCCTGGCAAACCACCATGAGAAGATGGACACGCTCCATGATTTCGCAGTTATGCCCGCCGGAGACGTGGCGCAGTTCGAATACGCCCAGCAGCAGCAACAGCAGCAGAATTCCATAGCTAGCCAGATCAATCAGTACAATTTAGCGATGAATTCGTTCACTGGTCAAGACGGCCTGGTCAAGATCGAGTCCCTGCCTTACTCAGACTCTAGGAGGAGCTACGTCGAAGTTGAGATGAACGACGGGACTCAGCACACCTGCAGCCACTGCGGGTCCAGTTTCGCCAGAGCCTCGGCACTTGCTGCTCATGAGAAAGTTCACACTTGCAAGAACTGGAATATGCCTGTGGAGTGCGAGTACTGCGACAAACAGTTTCAGGATGGTAACTGCCTCGCCACTCATCAGACCACCTGCGCCAAGAAGGTGATGAGGAACAGCGCAGAACACGGGGGAGTTCCGAACAGCAAATGGGGAAAACACGCCTGTGCCGATTGCGGGAAGAAGTTCACCACGAAGCAGAAGATGTTCAGACACCAGTGGATACACAGGAAGAAAACTCATTCCTGCGAAGTATGCGGAGCCCAGTTTGAAAAACAGCAGGAACTCGACGAGCACAGACTCTCCGCCCATCCTGGAGACTCGGCTTTCACCTGCGGGGAGTGCGGCAAGAGCTTCGTCTCCAGGCAGGGACTCTGGGAGCATGCCAGGACCCATGCAGGCAGTCCGGCTCATTTTCACTGCGACGTTTGCTCAAAAACTTTCTCCTCACGGCAGGGGTACCTTATACACCACAGAACCCACACCGGCGAACGACCCTATGGCTGTAAATATTGCTGGAAAGCCTTCAGGGACGGAGGAACTCTGAGGAAACACGAGAGAATTCATACAGGAGAGAGACCCCACGTTTGTCCGCTGTGCTCTAGGGCTTTCAATCAGAAAGTCGTCCTGAGAGAGCACGTCAGATGGGTTCACGCCGCTGGTAAAAATGAGACAGAAGTTACAGGCCCTCCGTTCAGGTGTCCGCTTTGCGGATCCCTGAACCAAGACCGTGAGGAGCTCTGCGCCCATATCGTTAAACACTCCGATCAAATGATCGCGGAGGCCAAGGCCAAGACCAACAACAACGCTTCTAAGCCTAAGCAGGCCAAGAAGAAGTCCAAAGCCGGTACTTCGGCCGCGGGAAAACAAAACGCGGGGAGTCAGGCCATTTCCAGAAGCGAACAGAACGAGGCTCTGCTCTCTATATCGGATCCGGCGACGAAGCAGCACGATAATCTTCCGCAGATTTTGGGAAAACCTAGCGACGCTCTGGTCCTGATCGCGGCGGCGAAGAGAAACGAAGCTTTGAGAATGATTTCTGAAGTCAAGGAGAACGATATGCAGGGGGAGAATCATCTTCATGTACCTCAGATTAATCACAGAGAATCTCTTAGTTTGAGAGGCGAGGATGATAGTAAACATAATACCGGAGTTAAACAGAACGACGCTGTTCAACAGCAGCACATAGTCGCCCAGAACAAACAGAGTAACACCCTGCATCTGATATCGAAGCAGAACGAATCTCTGCCCGTGCTAACGATACCAAATCCACAAAATCATGAACATTTTTCGAGTCAAATTGCGCAGATAAACAACGCCGTCGACGTACCAATGAACATGGTAACTCAGGGGGAACGGGAGAAATCTCAAACACCTTCTTCTTCCTCTTCTTCCTCTTCTTCTACTTCTTCTACTACTTCATCTACGCAAAAACATTCGGCAGTTATCCAGGTTCAATATCAGCAGAGAGAAAGTGACGACGGGGAAGAACCGGTCTGCGGTATGTGCGGGGAAGAATTTACAAATAGAAACTTACTTATGGAACACGTTAAAATTCATATTTAA
- Protein Sequence
- MEAAENEQQYVAFPLSANMHETIISHEEICEPVIEDCVLPEVIVSEVDSGITEVVEAAVEILAESSDPENDNDNEDEDSVYPIYIKQEDQQQYTSGDDESMAVEALRQLGGMYPCFNEKKISCPNCASLFTQLEMAKHHPTCAAVKLSCTTCGERFERKIDLNNHVVCHQVDRPHACRTCGNLFRSKANLQSHMAQVHQAERPHKCNICNSNFQRPSSLSNHMKIHTYVAGRAIMQTPPSASSTNTQSVEPFRKWPDNGASESPGTPVPSGSVPPIPTYEVTPQVHWSIPTYNFANDQTGLANHHEKMDTLHDFAVMPAGDVAQFEYAQQQQQQQNSIASQINQYNLAMNSFTGQDGLVKIESLPYSDSRRSYVEVEMNDGTQHTCSHCGSSFARASALAAHEKVHTCKNWNMPVECEYCDKQFQDGNCLATHQTTCAKKVMRNSAEHGGVPNSKWGKHACADCGKKFTTKQKMFRHQWIHRKKTHSCEVCGAQFEKQQELDEHRLSAHPGDSAFTCGECGKSFVSRQGLWEHARTHAGSPAHFHCDVCSKTFSSRQGYLIHHRTHTGERPYGCKYCWKAFRDGGTLRKHERIHTGERPHVCPLCSRAFNQKVVLREHVRWVHAAGKNETEVTGPPFRCPLCGSLNQDREELCAHIVKHSDQMIAEAKAKTNNNASKPKQAKKKSKAGTSAAGKQNAGSQAISRSEQNEALLSISDPATKQHDNLPQILGKPSDALVLIAAAKRNEALRMISEVKENDMQGENHLHVPQINHRESLSLRGEDDSKHNTGVKQNDAVQQQHIVAQNKQSNTLHLISKQNESLPVLTIPNPQNHEHFSSQIAQINNAVDVPMNMVTQGEREKSQTPSSSSSSSSSTSSTTSSTQKHSAVIQVQYQQRESDDGEEPVCGMCGEEFTNRNLLMEHVKIHI
Similar Transcription Factors
Sequence clustering based on sequence similarity using MMseqs2
- 100% Identity
- iTF_00718828;
- 90% Identity
- iTF_00718828;
- 80% Identity
- -