Basic Information

Insect: Euura saliciscinereae
Gene Symbol: -
Assembly: GCA_018420115.1
Location: JAFFZH010014206.1:48997-51020[+]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 15 0.0033 0.37 11.9 0.4 1 23 107 129 107 129 0.95

2 15 0.13 14 6.9 2.9 1 23 163 186 163 186 0.94

3 15 0.065 7.2 7.9 0.1 1 20 198 217 198 220 0.93

4 15 0.011 1.2 10.3 2.4 1 23 229 252 229 252 0.96

5 15 0.0013 0.15 13.2 0.7 1 23 266 288 266 288 0.97

6 15 0.22 24 6.2 3.7 2 23 300 322 299 322 0.94

7 15 0.16 18 6.6 8.2 2 23 330 351 329 351 0.96

8 15 0.0069 0.76 10.9 3.1 1 23 360 383 360 383 0.97

9 15 0.19 21 6.4 3.5 1 23 400 423 400 423 0.95

10 15 1.4e-06 0.00016 22.5 1.3 1 23 429 452 429 452 0.96

11 15 0.014 1.6 9.9 0.8 3 23 459 480 457 480 0.94

12 15 0.00025 0.028 15.4 0.3 1 23 485 508 485 508 0.97

13 15 2e-08 2.3e-06 28.3 0.4 2 23 515 536 514 536 0.97

14 15 8.2e-08 9.1e-06 26.4 0.4 1 23 542 564 542 564 0.98

15 15 1.9e-07 2.1e-05 25.3 0.3 1 23 570 592 570 592 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	15	0.0033	0.37	11.9	0.4	1	23	107	129	107	129	0.95
2	15	0.13	14	6.9	2.9	1	23	163	186	163	186	0.94
3	15	0.065	7.2	7.9	0.1	1	20	198	217	198	220	0.93
4	15	0.011	1.2	10.3	2.4	1	23	229	252	229	252	0.96
5	15	0.0013	0.15	13.2	0.7	1	23	266	288	266	288	0.97
6	15	0.22	24	6.2	3.7	2	23	300	322	299	322	0.94
7	15	0.16	18	6.6	8.2	2	23	330	351	329	351	0.96
8	15	0.0069	0.76	10.9	3.1	1	23	360	383	360	383	0.97
9	15	0.19	21	6.4	3.5	1	23	400	423	400	423	0.95
10	15	1.4e-06	0.00016	22.5	1.3	1	23	429	452	429	452	0.96
11	15	0.014	1.6	9.9	0.8	3	23	459	480	457	480	0.94
12	15	0.00025	0.028	15.4	0.3	1	23	485	508	485	508	0.97
13	15	2e-08	2.3e-06	28.3	0.4	2	23	515	536	514	536	0.97
14	15	8.2e-08	9.1e-06	26.4	0.4	1	23	542	564	542	564	0.98
15	15	1.9e-07	2.1e-05	25.3	0.3	1	23	570	592	570	592	0.98

Sequence Information

Coding Sequence: ATGAGAAGATATTTTCAGGGCGTTATTATGTCACCGAGATCCACCGGTGGTTTTAAAATAATGAAAACCGATTCTACGGGCAGATTTATTGTCGGAAAGAATTCAGTGCCTATGGAACTGTGGCAGAGATACAACCCGGAGGGCGGACCGTTATATTCTCTGATTCCTGTTTCTTCAAGGAGCGATAGAAATTCTAAGGACGAATTGATATCCAGTGAGGAAATCAAAGTCGAAGTCGCCGAAGATGTTAACGCTAGATGCTCGACGGATCGTGTTCAAGAATCGCTGGCTCACCTTTGTCAAGTCACTATAGAGTGTTACCCCTGCAGAAAATGCGGGCTAAAGTTTCCCATGAAGAATATGCTCGATCGTCACAAGATTGGACATGTTAGAAAGTCCCTGAAATGGTGGGACGTCGGGACAGTGAAGAAATCTCGACTTCGGGATCACATATGGAGACACAGAGTCGAGGAAAAGAATGTCGTTTATCTCTGCAGTTTCTGCGATTACAAATGTTACAAGAGAGGAACACTGGCTGTTCACGTTTCTAGAAAACACAGAGACAGGAGGTCCAAGGGTAGATCTAAACCGTATCGGTGCGATGTTTGCGACTACGCGTCGTGGAAGAAGGCGAATCTCAATGCACATTTATGGAGACACAAGGATAATCTAAGGGATTCCGTATTTTCGTGTAAAACTTGCGACTTTAAAGCAAAGAAGAGGAGCACTCTGGCCTCTCACATCACCAGGAAACACAAGACTCTCGGAGATGAGTCTAAGACTGTCGAAGAGGAGTTTCGCTGTGATACATGTGACTACAAAACTCTGACGAAGGAAGATCTTCAGGCCCATTTAAGGGAGCATAAGAAACCAACCGAAGAGGGGGTCAACTCGCTTTCGTGCACTTCGTGTAAATTCAAATGCAAGAAACAGTCGACGCTGGTCTCTCACGTTGCAAGAAATCACAAAATTGTTGACGACGAATGCGAATGCAATGTCTGCGACTTCAAGTGTTCTAAGAAAAGCACGATGTACTCTCACAAGCGAAGACACAGGGCTGAGAGCGAGGGCAACGTGTACAATTGTAACGAGTGTAATTTCAAAACGATAAAAAAGACTTCGCTCTATTCTCACATAAAAAGGAAACACAAAGTACAGTCAAAAACTGGCTCAGGAGTCGATCAAGGCACGGAATACTTTCACTGCAATCAGTGCGAATACAAGAATAAAAATAAGTACGAACTCAAGGTACACGTGGCCAGGAAACACACCGACGATTTTAAATTCTCTTGCGAGACTTGCGGCAAGAAGTTTAAAGTCAAGGGTGACCTGACAAACCATATAAGATTCAACCACAAGGAAGGTCCTGTGATATGCGACGTATGCGGCAAGACATGTCTCAACAGTAATTCCCTCTACGTTCATCAAAAGTTCGCCCATTACAAGGCCAAGTACGAGTGTCTGATCTGCAAGCGGCGCCTCGTCACCCAGGAGAATCTGGACGAGCACATGCTTCGGCAGCATGAGAAACGTGAGAACGTTGTATGCGAGGAATGTGGGAAGACATTCTCTCGCAACAGCAGACTCAAGGTTCACATGAGAATCCACACGGGCGATAAACCCTACAGCTGTAATATCTGTGGAAAGTCATTCGCGCGACGAACAGCCTTGAAACAACATCTACTGATACACACTGGAATCAGACCATACGTTTGTGATATTTGCGGAAAATCTTTTACCCAGAAACCGGGACTCATCAGCCACCGAAAATCTCATCCTGGTTCTCATCCCCCACTGCCTAGGGTTCTCATTGATCACATCCTGAATGACGTCATGAACAACTGA
Protein Sequence: MRRYFQGVIMSPRSTGGFKIMKTDSTGRFIVGKNSVPMELWQRYNPEGGPLYSLIPVSSRSDRNSKDELISSEEIKVEVAEDVNARCSTDRVQESLAHLCQVTIECYPCRKCGLKFPMKNMLDRHKIGHVRKSLKWWDVGTVKKSRLRDHIWRHRVEEKNVVYLCSFCDYKCYKRGTLAVHVSRKHRDRRSKGRSKPYRCDVCDYASWKKANLNAHLWRHKDNLRDSVFSCKTCDFKAKKRSTLASHITRKHKTLGDESKTVEEEFRCDTCDYKTLTKEDLQAHLREHKKPTEEGVNSLSCTSCKFKCKKQSTLVSHVARNHKIVDDECECNVCDFKCSKKSTMYSHKRRHRAESEGNVYNCNECNFKTIKKTSLYSHIKRKHKVQSKTGSGVDQGTEYFHCNQCEYKNKNKYELKVHVARKHTDDFKFSCETCGKKFKVKGDLTNHIRFNHKEGPVICDVCGKTCLNSNSLYVHQKFAHYKAKYECLICKRRLVTQENLDEHMLRQHEKRENVVCEECGKTFSRNSRLKVHMRIHTGDKPYSCNICGKSFARRTALKQHLLIHTGIRPYVCDICGKSFTQKPGLISHRKSHPGSHPPLPRVLIDHILNDVMNN

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00718821;
90% Identity: iTF_00718821;
80% Identity: -