Basic Information

Insect: Euura saliciscinereae
Gene Symbol: -
Assembly: GCA_018420115.1
Location: JAFFZH010015336.1:4691-9041[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 14 0.043 4.7 8.5 3.1 1 23 26 48 26 48 0.94

2 14 0.00029 0.033 15.3 0.2 1 23 79 102 79 102 0.97

3 14 9.3e-05 0.01 16.8 1.8 2 23 109 130 108 130 0.97

4 14 1.6e-05 0.0017 19.3 3.5 2 23 137 158 136 158 0.96

5 14 1.4e-05 0.0015 19.4 0.2 1 23 164 186 164 186 0.97

6 14 0.0095 1 10.5 1.1 3 23 195 216 193 216 0.96

7 14 0.00065 0.072 14.2 1.5 1 23 235 257 235 257 0.97

8 14 0.25 28 6.0 1.6 2 20 264 282 263 284 0.92

9 14 6.1e-05 0.0067 17.4 1.5 1 23 791 813 791 813 0.98

10 14 1.9e-05 0.0021 19.0 0.8 1 23 820 842 820 842 0.99

11 14 2.8e-05 0.0031 18.5 0.1 1 23 850 873 850 873 0.97

12 14 1.1e-06 0.00012 22.9 2.3 2 23 880 901 879 901 0.98

13 14 0.0025 0.28 12.3 6.8 1 23 907 929 907 929 0.98

14 14 2.2e-06 0.00024 21.9 1.1 1 23 935 957 935 957 0.98

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	14	0.043	4.7	8.5	3.1	1	23	26	48	26	48	0.94
2	14	0.00029	0.033	15.3	0.2	1	23	79	102	79	102	0.97
3	14	9.3e-05	0.01	16.8	1.8	2	23	109	130	108	130	0.97
4	14	1.6e-05	0.0017	19.3	3.5	2	23	137	158	136	158	0.96
5	14	1.4e-05	0.0015	19.4	0.2	1	23	164	186	164	186	0.97
6	14	0.0095	1	10.5	1.1	3	23	195	216	193	216	0.96
7	14	0.00065	0.072	14.2	1.5	1	23	235	257	235	257	0.97
8	14	0.25	28	6.0	1.6	2	20	264	282	263	284	0.92
9	14	6.1e-05	0.0067	17.4	1.5	1	23	791	813	791	813	0.98
10	14	1.9e-05	0.0021	19.0	0.8	1	23	820	842	820	842	0.99
11	14	2.8e-05	0.0031	18.5	0.1	1	23	850	873	850	873	0.97
12	14	1.1e-06	0.00012	22.9	2.3	2	23	880	901	879	901	0.98
13	14	0.0025	0.28	12.3	6.8	1	23	907	929	907	929	0.98
14	14	2.2e-06	0.00024	21.9	1.1	1	23	935	957	935	957	0.98

Sequence Information

Coding Sequence: ATGAACGCGGATTCTGGATCTTTTTCATCCCTCACTCCCTGCGGTAATGAGAGAACGAAAATCGATGAGCCGGAGTACCTCTGTTCCTTGTGTAAAAATTGCTTCTCAAACAAAAAACTGTTCGTCGACCACTTGGGCTCCCACTGCCTTAGGATAGGCGATGACGACGGGGAGAGTAACGTGGGATCTAGAGAAGAGCCAGTCTCAACCGTTACGACTCTAGTCGTCAGGCCCTTTGAATGCGAACTGTGCGAATTGGTCTTTGATAGAGTCTCTCAACTCGATAATCACAGACGTAGCGTACACCGGCAGGAAAGATCACAAGTCTGTCAGTTATGCGGGAAGGGATTTTTCAGACACACAGACCTTAAAACTCACCTGAATATTCACCTCGGTACAAACAGATGCATGTGCGAGGTTTGCGGAAGAAAATTCAACCACGTGTCTAATCTGATCAGACACGGAAGGACGCACTCGGGCGTTAAACCGTACCCATGCACCGTATGCGGCAAGAGGTTTACCCAGATAAATACTCTGGCGAGGCACAAGGCTATTCACAAAAGAGGGGGTCAAAGCTTGGACTGTTCATTTTGTAGCAAGCGATACAAATCTGAAAATGGTCTGGGGGAACACATGAAGAAATTTCACGGCTTCACGGAAAAGCTGACCTCCGAGGACAACCGGAAGATTATAAAACGTCGACACTACTGTAAAATTTGTGGAGAAAGTTTTCAGTTCGTAGAACTGCTCAGAGACCACGAAAAAACGCATCAAAACGACGATACGTTGGAATGCAAAAGCTGTGATCAGAAATTCAGAAAAACGGACGAGATCAAAGAGCACAGATGTGGAAGGCAGCTTAAGCTCATTCCCGACCCCGAAGTAATCGAATCGAGAAAAATAATCAAAGATAAGATTATATCGGTGAATTTGTTTAGGGACAATGAGAGCGTTCTGCTCACCCAACTGGGAGAAATCAACGAAGATTCGAGAGGGCTTGATTACAAATTGTCTCATCAGGCGATCGACCGTTCTTATAAAATTACGGAGGACAAACAGACGAAGGAAACTATCGTTTATGTTACAACGGAACAGCTTGCGACCATGAACACGGAGCAAGTAGCGGACACGGCGGGTCATTTTCTGCACGAGCACCTCATGGAACTTGCCGTCGAAGACAACATCAGCTCTCGCGAGTCCGACGAAGAGACAGTTGTATCGGAAATGATAAATAGCTGCTGGAACGAAATAGAGATACCTGACGTTAATGAATCTCATGTATCAGAGAAGAGGGTTTCAGCTTCTAAGAATAATTCACAGAATATAATTCACGTCCTTGCCTCGAAAAAGTTTTGCCAGGATAAAATAGAGCCGAAAAAAATGATTGACTGTCAATCAAATGCGAAACCGATGAGAGGAATAAGATCTGGAATCCCGAGGGATTATTTTGGAGAAAGTAATTCTGGAAATATTATAGACATACATAGCGACGATTTTAACGTAGCCGAATCAGCGACTGTAAAATCGGTAGCCGAACCGACGCTGAAACTAGTGAAGACAGAAAGTGGGGAAGAATTTTATGAGCTATTGATAACTAATTGCCCCGACAAGTCTGATAATTCTTACGAATCGGATAGAATATCGATCGAAACTGTTTTGGAAAGTTTGAGACCGAGACAGCGGAACGAGCCTATTTCAGAATCTTTATTAAAAGTAGTTCACTTGGAGAATGGTCAACGTGTTTTAGAAATAATGAAAAATAGTTTAGGCGTCGAAGAAGCCATCAAAGATTCTTCACCCTCTTCGGTATCCGAAGAAAATTCTTCGGAGAATAAGAATGAGAAGATAATTCAATTTGCTCAAAATAGTAAGGACAATTTGATAGATTTCTTTGAAATTGAGACCCTCGGAAACCAGGAGGCGGCAAACGGCTTTAATCTATCCGAACAAGTGATGCAGAATGTTCAGCAAACGAATTTCGATACTTTACCAACGTTGAATAGAAACGGTAAAGACCACGAGTCTTCTATACAGAAAGAAGGCTGCGAGGAACTATTGGGACTGATTCAGAATAACGACCCTACAAAATCCATCGATAAAATAAAAAAAATAACGGAAGAAGCGCCGATGGTTAGACTCGTGCAAAACGAGGATGGTGCTCAATTTTTTGAACTTATAAGAGGAGATTTGGAATTCGAAGATCCCATCGAGTTGGTAGAAAGGAGCGAATTTCATTCCGAGGATCATCTTCGGCTTGGAAACGGAGAGTATATCACAAAAAAAGCTAAACAGGGAGAATCTGGCGCTGCGATAAAGTCCGAGACCGATTTACCACGCGTGAAAAAGAAGTATAAGAACAAGGAAAAGAAATACAACTGCGATGTCTGTAAGAAATCATTTTCAAAGGGATACAACTACAGACAACACATTGGAACGCATTTCGCTGATCAACAAAAATTCAAATGCAAAGAATGCGGACAATTTTTTGCGTGGAAATCAACACTGAACAAACACATCGCCACTCATAGGGCCGGGGGACAGCAGAAATTCGTTTGCGAAATCTGCCCTAAAGTTTATACAACTTTGTCACAAGTTAATGAACACGTGAAGAGGGATCACCTCAAGGAACGGAATAACAAGTGCACAGAATGCGGCAAGACTTTCTTCAAGAAATTCGATCTCAAGATACACATTCGTACTCACACAAAAGAACGACCTTACGAATGTCGTGTTTGCTACAAGAGTTTTCATCACCAGAGTCACATAATTCGTCACGAACGAATACATTCGGGGGAGAGACCTTACGCTTGTAACATTTGCGAAAAGACATTCACGCAACTTGGATCGCTCAAAAGTCACAGACAGAGACATCAAGAATTGAAAATAGATATACTAGATTATCAGATGGACGAGGACGAGCCTCTACCTCGAACTACGTTGTAG
Protein Sequence: MNADSGSFSSLTPCGNERTKIDEPEYLCSLCKNCFSNKKLFVDHLGSHCLRIGDDDGESNVGSREEPVSTVTTLVVRPFECELCELVFDRVSQLDNHRRSVHRQERSQVCQLCGKGFFRHTDLKTHLNIHLGTNRCMCEVCGRKFNHVSNLIRHGRTHSGVKPYPCTVCGKRFTQINTLARHKAIHKRGGQSLDCSFCSKRYKSENGLGEHMKKFHGFTEKLTSEDNRKIIKRRHYCKICGESFQFVELLRDHEKTHQNDDTLECKSCDQKFRKTDEIKEHRCGRQLKLIPDPEVIESRKIIKDKIISVNLFRDNESVLLTQLGEINEDSRGLDYKLSHQAIDRSYKITEDKQTKETIVYVTTEQLATMNTEQVADTAGHFLHEHLMELAVEDNISSRESDEETVVSEMINSCWNEIEIPDVNESHVSEKRVSASKNNSQNIIHVLASKKFCQDKIEPKKMIDCQSNAKPMRGIRSGIPRDYFGESNSGNIIDIHSDDFNVAESATVKSVAEPTLKLVKTESGEEFYELLITNCPDKSDNSYESDRISIETVLESLRPRQRNEPISESLLKVVHLENGQRVLEIMKNSLGVEEAIKDSSPSSVSEENSSENKNEKIIQFAQNSKDNLIDFFEIETLGNQEAANGFNLSEQVMQNVQQTNFDTLPTLNRNGKDHESSIQKEGCEELLGLIQNNDPTKSIDKIKKITEEAPMVRLVQNEDGAQFFELIRGDLEFEDPIELVERSEFHSEDHLRLGNGEYITKKAKQGESGAAIKSETDLPRVKKKYKNKEKKYNCDVCKKSFSKGYNYRQHIGTHFADQQKFKCKECGQFFAWKSTLNKHIATHRAGGQQKFVCEICPKVYTTLSQVNEHVKRDHLKERNNKCTECGKTFFKKFDLKIHIRTHTKERPYECRVCYKSFHHQSHIIRHERIHSGERPYACNICEKTFTQLGSLKSHRQRHQELKIDILDYQMDEDEPLPRTTL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: -
90% Identity: -
80% Identity: -