Esal004629.1


Basic Information
Transcription Factor Domain
Sequence Information
Similer Transcription Factors

Basic Information

Insect
Euura saliciscinereae
Gene Symbol
-
Assembly
GCA_018420115.1
Location
JAFFZH010015941.1:77218-81649[+]

Transcription Factor Domain

TF Family
zf-C2H2
Domain
zf-C2H2 domain
PFAM
PF00096
TF Group
Zinc-Coordinating Group
Description
The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out
# of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc
1 22 0.23 25 6.2 3.5 2 23 228 250 227 250 0.97
2 22 0.048 5.4 8.3 1.8 1 23 355 377 355 377 0.98
3 22 0.00062 0.069 14.2 2.3 1 23 426 449 426 449 0.97
4 22 0.0068 0.75 11.0 0.8 1 20 491 510 491 512 0.94
5 22 1.2 1.3e+02 3.9 1.0 1 23 524 547 524 547 0.89
6 22 0.13 14 7.0 0.8 2 23 553 575 552 575 0.94
7 22 0.002 0.23 12.6 0.1 1 23 620 642 620 642 0.97
8 22 0.00069 0.076 14.1 0.1 1 23 648 670 648 670 0.97
9 22 0.00011 0.012 16.6 0.4 3 23 715 736 714 736 0.93
10 22 7.9e-05 0.0088 17.0 1.9 2 23 744 766 744 766 0.98
11 22 0.00021 0.024 15.7 1.9 2 23 774 796 773 796 0.97
12 22 0.0001 0.011 16.7 0.2 1 23 804 826 804 826 0.94
13 22 0.12 13 7.1 0.1 2 20 876 894 875 894 0.95
14 22 0.016 1.7 9.8 0.2 2 23 914 935 913 935 0.95
15 22 0.0003 0.033 15.2 0.8 1 23 962 984 962 984 0.97
16 22 6.2e-05 0.0068 17.4 2.5 1 23 1006 1028 1006 1028 0.97
17 22 5.3 5.9e+02 1.8 0.2 1 19 1046 1064 1046 1067 0.83
18 22 0.4 44 5.4 2.5 2 23 1130 1152 1129 1153 0.94
19 22 0.0091 1 10.6 0.0 1 23 1186 1209 1186 1209 0.92
20 22 0.00011 0.012 16.6 0.2 2 23 1216 1237 1216 1237 0.97
21 22 0.0078 0.87 10.8 0.4 1 23 1242 1265 1242 1265 0.94
22 22 0.00027 0.03 15.3 0.9 1 23 1298 1321 1298 1321 0.95

Sequence Information

Coding Sequence
ATGGATAATGCAGGGTCAATACCGAACGTCGAGGCTGTATGCCGGCTATGTTTGTCCGAGGACGAGCCGAAGCTATCAATATTCGATGGGGATGATTCGTCCGTGCCGTTATCTTCGAAGATACAAGCCTGTCTGGCCATCCAGGTCTCATCCTCCGACAAATTGTCCACTCTGATATGCAAGGGGTGTGTGGCTAACGTCAACCAATGGCACAGCTACAGGGAGTCCTGCCTCGAGGCACAGGAGAAAATTAAGCAATGGCATATGCAGCAGATTTCTGTACAGACGGGAGTCATCAAACAGGAGCCGATCGATCTGGAGTTTGAGACGGACCAGAATGAAGCCGTTATGGAATTAACATCCTCGGATCACGACCTACAGGATCAAAATGACGGAGAAATGGCGCTGCGAATCACAAACGAGGAAACTATTCGTGTGGAGAAAGAAATTCCGGAAGTCAAGGAGGAACCGAAGCCGGAAGACGAGTACGACTCCACTTTGGAAATCGAGTCGGTAACGGGTGGAGAAATTCTGCCTAATCCTGTGGCGGCCTTGTGTCCGGAGAAGGAAAGGGTCATGGAAGCTGATTCGACGCAGAAATCGACCTCCGCTGTTAGAACCAAAAGAAAAGCGAGGAGAGGACCTAAAACTCATGTCAGACACAAGCGTGGTTTCAGGAAAAAGTGTGTCTATTGCCAGATCAATCTTCACTCGAAGTATTCGTACGCTAAACACATGCAGAGGTTTCATACCCCCGTTTCAGACTCGGAACAGAAAGACGATAAGACCGAGTTGAAGTACGTGATAAAGAAACAGAACAGTACAAATTCACAATCTTCAAAGTTTCAGGAAAAGATTAAATTTAATAGAAATAATTCTCAGGCGGGAAACAGCAAAGATAATGGATTCGGAAATGATAACGACAGGGCTCATAACAGTATGAAAAAAGACGTGGACGAAGAAATGATCGAGGATGTCGAAGACGAGATCGACAATATGGACAAAAACTCTGACACACCGTTGTCACAAGTTCAACAGAATATCATCGGCCAGCTGAAAACTTACTCATGCTATTCGTGCAAACAGGTTTTCCCCGATCGTCGGACAACCTTGAACCACTTGAGGCAGCACTTGCCCGACCTTCGCCCCTTCACATGCGTAGCTTGTCTAACTCAGTTCCCAGATCGCGCTATCTACAAGGATCACTGTTACACGTCGTTCGAATGCGCCATGAAGATAGCCATCGTCGAGCCAAAGTCTGGCCTGGAGAAATACTTCACTTGCAACATGTGCTCAAAGTCCGTTGCCAACAGGAAAGAACTCCTGCACCACTTGACCACTCAGCACTCCGAGGAAGCGATCACAACCCCGGGAAAAAAACCCGCCAAGATTGGCCCCAAACAAGGCACCCCGCACCCCGGAGTTTCGAGCTTACCTGGCCCGTACGAGAACGGAAATCCCGCGTATAATCACACCTGCGGATTCTGCGGGATGATTTACAAGCACGAACGCAATCTGAGAGAGCATAGAATCCTCTGCAGCCGACTTCCCATGAATGTCAGGACCTCTTACGCCTGTGTACACTGCGGGCTGACCTTTCTAATCTTCAGGAAGTTCATCAGCCATCTGAACACCGCGCATAAGAAGACGGACATCACTTGCTCAAGGTGCCGCAAGGGCTTTGACGCAGCTTCTGACTATCTGGCTCATCATGAGAAGTACCACACGAACGAGTCCGGCAGTCCTCATAGCAAGGACAACGGGAGATCATCCACGAGCTTTGAGAGTCCTTTGAAGGACTGGAACGACTTTGAGGCAGAAGTACACGCGAACGAGTCCAGGATCAGCCGGCAAAAGTACAGCTGCGCTTTGTGCGGTCAGGAATTTCCGACCAGGACCGAGCTCGGGGAGCACAGAAATCTTCACTTGAAAGTCAAGATATATTCCTGCGTTATTTGCCGCAGCATGTTCAGCAGCGCGGGAGCCCTTGAAGTTCACATGAAAGATCACGGGATTGAAGATCCGGCGGAACAGAGCGCCCATACTTCTTGCGTCGAGTACGAGGGCACCGAGGACACGAAGGATAATATTATTCTCATGGACGGTTCTCAGGAGTCTGAAAATGACCCGGAGGAAAAGGACTGCAAAATTTGCAACAAGAGTTTCTCAAGCGCTGCGAATCAGAAGAGACACGTCGCTAACGTACATAGAAATAGCAAAAATCGTCGAAAATGTATGGAATGCAACAAGATTTTCAGCAAGAAGAATTCCTACGAATATCACATGAGAACCGAGCACAGAAGACAAAATTTACAGATAAAGTGCCACGTCTGTTTGCAGAGTTTCACTAACAGGGCTAACTTCAATCTGCACTACCAAACCGCGCATGCCAACACAACCAGGACTCCCTACGAGTGCGACATATGCGGTAAACAGTTCAAGGAAGAAAACTCGCTCAAGATACACAGGGGGTGGCACGCCAGGAGGACCCACCGACTGACGCAGGACATAACTCTCCTAAATCTCAACAGAAGCGTGGAGAATTCTACAGAGCCGATAGTGAAGCCGGCCAGAGCGAGAAAATCCTTCCCAAATTCGCCGCCAGCCAAGCCTGTGCCTCAATTACAGTGCCAGGTCTGCGACAACAAGTTTGCAGAGGTGACCGAGCTGCGGAAACACCTCTGGGACGTTCACTGCTCTCGCAATAAGACCGAGAAGAATTACACAACGAACGATCTTCAGTGCGAGCTCTGCACTCATGTCCTCCCGGATAAACCTAGTCTCGAGAGACACTTGGAATGGCACATGGAAAACCCGATTTTAAGCGACTCAAAGAACGGGTTGAAGAGAAAGAGGTACTACACGCCTCGGGAGCTCCGCACCCATCCCTGCGAAACTTGCGGCAATTTTTACACATCCAGGGGCAGCCTGCTGAGGCATCAAAAACTCCACAAAGTCAGCACAGTCGCGGCGGTAAAGTTCCAGGCTTTGACCAAGAAGCAGCTCGTTTCTCAATTCCCTTGCAACATTTGTCACAAGATATTCGCAACTTCGATGAAACTCCGCAAGCACAGGGTCCGCCACTTCGTCAATCCCAACGACAGAAAGAGACACTCGGTACTCGAGAAGTCCGACTACAAGTGTGAACTGTGTCTGAAGTATTACATCTCCGAAGTCGGGCTACGTTTTCATCTGGAAAAAATCTGCCCCTTTCGCAAAGACGACGCGGGTAATCCTCAAAACAAACGTCGCAGGATCGCTTCTCTCGGGGAGAACAGCGCCTCGGCTGAAATCGATCCGCCCAAGCCTATTCCGAATCTGAATCCCCTACCCGGTGGCAAAACGAACACCGCACTTCCGGTCAACTGGAAAGTAAAGAAGATGGTGACCTGTAGCCTGTGCCGTAAATCGTTCCTCGGAAAGAGCTTGTTCTACAAACACAGGGTGACCGTGCATCACAAGGAGATCTTTGGACGCCACGCAGCGTCGATTAACAGGAAGGTGAACCCTGCTCCGAGACCAGCACCTCCGACTACTTCAGCCAATGGAGGGAGCTTCGCGTGCAGCAGTTGCGGCAAGGAATTCGCGGCGGCGTTGAATCTGAAAATGCACATCGCAGCTGTTCACAAAAATACCAATCCGAATACTTGTCATATTTGCGGGGCGTCGTTCTCGTCTAGAGTCGGCGTTAACAATCACATGGCTGTGCATTCTACGGACAGTTTTAGCTGCAACATTTGCCAACGAATATTCAGATCGAGACCGGCCGTTTATATTCACGTCAGTAGACAGCATCCGGAGGAATACACCATAATGCAAGACGACAAGTCTAAATTGTTCACCCAATTAACGACAAAATCAACCGGCGCAGGAGCTAACGAACCGACCTCGTTCGACTGCGCCTATTGCAACAAGAAATTCGAGTCCAACAAGGGACTCAGAGTTCACGCTATGAAACGGCATTCCGTGCGTCATTAA
Protein Sequence
MDNAGSIPNVEAVCRLCLSEDEPKLSIFDGDDSSVPLSSKIQACLAIQVSSSDKLSTLICKGCVANVNQWHSYRESCLEAQEKIKQWHMQQISVQTGVIKQEPIDLEFETDQNEAVMELTSSDHDLQDQNDGEMALRITNEETIRVEKEIPEVKEEPKPEDEYDSTLEIESVTGGEILPNPVAALCPEKERVMEADSTQKSTSAVRTKRKARRGPKTHVRHKRGFRKKCVYCQINLHSKYSYAKHMQRFHTPVSDSEQKDDKTELKYVIKKQNSTNSQSSKFQEKIKFNRNNSQAGNSKDNGFGNDNDRAHNSMKKDVDEEMIEDVEDEIDNMDKNSDTPLSQVQQNIIGQLKTYSCYSCKQVFPDRRTTLNHLRQHLPDLRPFTCVACLTQFPDRAIYKDHCYTSFECAMKIAIVEPKSGLEKYFTCNMCSKSVANRKELLHHLTTQHSEEAITTPGKKPAKIGPKQGTPHPGVSSLPGPYENGNPAYNHTCGFCGMIYKHERNLREHRILCSRLPMNVRTSYACVHCGLTFLIFRKFISHLNTAHKKTDITCSRCRKGFDAASDYLAHHEKYHTNESGSPHSKDNGRSSTSFESPLKDWNDFEAEVHANESRISRQKYSCALCGQEFPTRTELGEHRNLHLKVKIYSCVICRSMFSSAGALEVHMKDHGIEDPAEQSAHTSCVEYEGTEDTKDNIILMDGSQESENDPEEKDCKICNKSFSSAANQKRHVANVHRNSKNRRKCMECNKIFSKKNSYEYHMRTEHRRQNLQIKCHVCLQSFTNRANFNLHYQTAHANTTRTPYECDICGKQFKEENSLKIHRGWHARRTHRLTQDITLLNLNRSVENSTEPIVKPARARKSFPNSPPAKPVPQLQCQVCDNKFAEVTELRKHLWDVHCSRNKTEKNYTTNDLQCELCTHVLPDKPSLERHLEWHMENPILSDSKNGLKRKRYYTPRELRTHPCETCGNFYTSRGSLLRHQKLHKVSTVAAVKFQALTKKQLVSQFPCNICHKIFATSMKLRKHRVRHFVNPNDRKRHSVLEKSDYKCELCLKYYISEVGLRFHLEKICPFRKDDAGNPQNKRRRIASLGENSASAEIDPPKPIPNLNPLPGGKTNTALPVNWKVKKMVTCSLCRKSFLGKSLFYKHRVTVHHKEIFGRHAASINRKVNPAPRPAPPTTSANGGSFACSSCGKEFAAALNLKMHIAAVHKNTNPNTCHICGASFSSRVGVNNHMAVHSTDSFSCNICQRIFRSRPAVYIHVSRQHPEEYTIMQDDKSKLFTQLTTKSTGAGANEPTSFDCAYCNKKFESNKGLRVHAMKRHSVRH

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity
-
90% Identity
-
80% Identity
-