Basic Information

Insect: Euura saliciscinereae
Gene Symbol: -
Assembly: GCA_018420115.1
Location: JAFFZH010015629.1:4519-10625[-]

Transcription Factor Domain

TF Family: zf-C2H2
Domain: zf-C2H2 domain
PFAM: PF00096
TF Group: Zinc-Coordinating Group
Description: The C2H2 zinc finger is the classical zinc finger domain. The two conserved cysteines and histidines co-ordinate a zinc ion. The following pattern describes the zinc finger. #-X-C-X(1-5)-C-X3-#-X5-#-X2-H-X(3-6)-[H/C] Where X can be any amino acid, and numbers in brackets indicate the number of residues. The positions marked # are those that are important for the stable fold of the zinc finger. The final position can be either his or cys. The C2H2 zinc finger is composed of two short beta strands followed by an alpha helix. The amino terminal part of the helix binds the major groove in DNA binding zinc fingers. The accepted consensus binding sequence for Sp1 is usually defined by the asymmetric hexanucleotide core GGGCGG but this sequence does not include, among others, the GAG (=CTC) repeat that constitutes a high-affinity site for Sp1 binding to the wt1 promoter [1].
Hmmscan Out: # of c-Evalue i-Evalue score bias hmm coord from hmm coord to ali coord from ali coord to env coord from env coord to acc

1 12 0.0012 0.13 13.3 0.1 1 20 266 285 266 289 0.91

2 12 1.8e-05 0.002 19.0 0.4 1 23 296 318 296 318 0.98

3 12 7.6e-07 8.4e-05 23.4 4.8 1 23 324 346 324 346 0.98

4 12 0.00028 0.031 15.3 6.0 2 23 363 384 363 384 0.98

5 12 2.5e-08 2.7e-06 28.1 2.6 1 23 389 411 389 411 0.98

6 12 8.1e-08 9e-06 26.5 0.8 1 23 416 438 416 438 0.98

7 12 7.1e-08 7.8e-06 26.6 2.9 1 23 444 466 444 466 0.97

8 12 2.5e-05 0.0028 18.6 1.2 1 23 531 553 531 553 0.98

9 12 8.6e-06 0.00095 20.1 1.1 2 23 564 585 564 585 0.97

10 12 7.4e-06 0.00082 20.3 1.3 1 23 590 612 590 612 0.98

11 12 3.4e-05 0.0038 18.2 2.7 1 23 618 640 618 640 0.93

12 12 0.00011 0.012 16.6 2.1 1 20 646 665 646 667 0.95

#	of	c-Evalue	i-Evalue	score	bias	hmm coord from	hmm coord to	ali coord from	ali coord to	env coord from	env coord to	acc
1	12	0.0012	0.13	13.3	0.1	1	20	266	285	266	289	0.91
2	12	1.8e-05	0.002	19.0	0.4	1	23	296	318	296	318	0.98
3	12	7.6e-07	8.4e-05	23.4	4.8	1	23	324	346	324	346	0.98
4	12	0.00028	0.031	15.3	6.0	2	23	363	384	363	384	0.98
5	12	2.5e-08	2.7e-06	28.1	2.6	1	23	389	411	389	411	0.98
6	12	8.1e-08	9e-06	26.5	0.8	1	23	416	438	416	438	0.98
7	12	7.1e-08	7.8e-06	26.6	2.9	1	23	444	466	444	466	0.97
8	12	2.5e-05	0.0028	18.6	1.2	1	23	531	553	531	553	0.98
9	12	8.6e-06	0.00095	20.1	1.1	2	23	564	585	564	585	0.97
10	12	7.4e-06	0.00082	20.3	1.3	1	23	590	612	590	612	0.98
11	12	3.4e-05	0.0038	18.2	2.7	1	23	618	640	618	640	0.93
12	12	0.00011	0.012	16.6	2.1	1	20	646	665	646	667	0.95

Sequence Information

Coding Sequence: ATGGCTTCGTCCGTGTTCGGCATAAGCCACGGCAAGTGCCAAATTCATTTGTTTCTCGACGCTGTTACGCCGGTCGGACATTGGATTCCGTACCCTGAAACCTTGGACATTGTGGGAATCTTCGAAATCATCTACGGCAAGCAGAGATCGACAGCTGCAGAGCTGAGAATGATTACGCTGGAGACTATGACCAGTGCAATACACGTTTTTCACAGGTGGTACAGTTGCAACTTACGAAATGCTCTAGTCAATAAAAAACGGATACACAAAGAGCTGTACAAAGAGTTCGTTAATGATCGCTACCTCGCTGAGTTTAAAGCATTACGGAGGGAGTGTAAGTCTTTAATAGCTAGAGATTTTGAAGCCTACGTTAATCGTACGGAGTCTGGCATTTGCTCTGACGTGAGAGTTTTTTGGGGTTTCGTCAACGGACAGAAGGGTCAAGTTGATATCCCTAACTCCATGTACCTGAATGAATTAGTTGGTAATAACGGTTCTGAGATCAATAGAAATGGGATCGGATCCTCCGTCGACGAGGCGTCAAACAGGAACGTCTCGGCTCTGAGAGGATTTTTCGACTACGTTAAAACAATTTCAGCCAAAAATGTTAAATACGAGCCGCAATATTCGATGATGAGTGGAAAAACTGGCGCGAATCTATCGGATCTAATGGAAAAAGAAGAGACGGAGAAACCTCTGATCGTATACAACAACGTGGCCGAGTCCGTAAATTTACTGCCCGAAGAGAACGACGACGACGTTAATTGGAAACTGAGCAACAGAAATGAGAATTTTTACAGATGCCCGGTCTGCCAGGTTGAATTTTCGAGTCGAATATCGTTGGACAGACACGTGGTGGATCTTCACCTCGGTAAAACTGGTCGTTTTCAGTGCGAAATATGCCAGAATGAGTTTACCAGGCTTTCAGATCTGGCAAGACACAAGCTTATACACTCCGGGGTAAAACCTTTCCAATGTAACACGTGCCAGAAGCAGTTCACCAGGCAGGATCACCTCAAGCAGCACATTATGAGCCATTCTCAGTGCTCCGACGGGGAGTTTTTCGCCTTTGAGAACGGTTTGAACAGGTGCACCGTGTGCCACAAGCAATTGTCGCGCCCGCAGCACCTCAGAACCCACATGAGACAGCACTTGGGGACTTTGTTCGAGTGCGATAATTGCAACAAGAGGTTTTCCAGGGCGTCTCACCTCAGAGCCCACATGCGACTCCACCTGGGAACGTGTTTCAGATGCGATATCTGCCAGAAAGAATTCTCAAGGCCCTCGGATCTCGAGAGACACAAACTCACGCATCTGGATAAAAAATTATTCGACTGTCCTACTTGCAGGAAGAAATTTTCGAGGAAGGATAATCTGAAAAAGCACATGATGTCTCACGTTGAATCGAACGCTGATAAAAACAAGGGGGATCGTACGGAGTTCGATTTGCATGACCTCTGCATGAATTCTCGGAGAAATTGTGTCAATGCGAAATTGGAGTTGAATTCTTTGGATCAAAGCAACGGAGAATTTGGCTCGAAATTTCCCTTTGACGGTAACGTTTGTTCGCTCGATTGGCCGACGAATAAATTTGAGTGCGCGCTATGCGAGAAACGTTTTAACAGAAAGGTTCGATTAAAAGAGCACGTTCGTACACACGGAGAGGTGGATTACTCCCCGAACAATAATGTATGCAATGTTTGTCAGAAGCAGCTGTCTCGACCCGAGCACTTGAAGGCGCACATGAGACTGCACCTTGGGACGCTTTTCAAGTGCGAAACATGCCAAAAAGAATTTTCAAGACTGTCTGATCTTGACAGACACAAGCTTGTACACTCTGGACTGAAACAATTTATATGCATTATTTGCCACAAACAATTTTCGAGGAAAGATTACCTCAAGAATCACATGATTTCACACACTAATCAGAAATCGTTTGAATGCGACAAGTGCAAAAAGCGATTCACGTATTTCACTAATTTAAGAAACCACCTGTTCATTAGGGGATTGAAATCAGGAAGTCAATTATAG
Protein Sequence: MASSVFGISHGKCQIHLFLDAVTPVGHWIPYPETLDIVGIFEIIYGKQRSTAAELRMITLETMTSAIHVFHRWYSCNLRNALVNKKRIHKELYKEFVNDRYLAEFKALRRECKSLIARDFEAYVNRTESGICSDVRVFWGFVNGQKGQVDIPNSMYLNELVGNNGSEINRNGIGSSVDEASNRNVSALRGFFDYVKTISAKNVKYEPQYSMMSGKTGANLSDLMEKEETEKPLIVYNNVAESVNLLPEENDDDVNWKLSNRNENFYRCPVCQVEFSSRISLDRHVVDLHLGKTGRFQCEICQNEFTRLSDLARHKLIHSGVKPFQCNTCQKQFTRQDHLKQHIMSHSQCSDGEFFAFENGLNRCTVCHKQLSRPQHLRTHMRQHLGTLFECDNCNKRFSRASHLRAHMRLHLGTCFRCDICQKEFSRPSDLERHKLTHLDKKLFDCPTCRKKFSRKDNLKKHMMSHVESNADKNKGDRTEFDLHDLCMNSRRNCVNAKLELNSLDQSNGEFGSKFPFDGNVCSLDWPTNKFECALCEKRFNRKVRLKEHVRTHGEVDYSPNNNVCNVCQKQLSRPEHLKAHMRLHLGTLFKCETCQKEFSRLSDLDRHKLVHSGLKQFICIICHKQFSRKDYLKNHMISHTNQKSFECDKCKKRFTYFTNLRNHLFIRGLKSGSQL

Similar Transcription Factors

Sequence clustering based on sequence similarity using MMseqs2

100% Identity: iTF_00719603;
90% Identity: iTF_00719603;
80% Identity: iTF_00719603;